RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 H0Y8G0 127 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 GAS8-AS1O95177 125 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 MGPP08493 103 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 NPSP0C0P6 89 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 GATA1P15976 413 aaPredicted RBP6.23□□□□□ -1.41
VTI1A-207ENST00000489357 TFPI2P48307 235 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 POLR2KP53803 58 aaKnown RBP6.23□□□□□ -1.41
VTI1A-207ENST00000489357 SLURP1P55000 103 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 DEFB1P60022 68 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 SEC11AP67812 179 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 RHOHQ15669 191 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 DEFB114Q30KQ6 69 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 TRPT1Q86TN4 253 aaKnown RBP6.23□□□□□ -1.41
VTI1A-207ENST00000489357 TMEM61Q8N0U2 210 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 ORAOV1Q8WV07 137 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 KRTAP4-12Q9BQ66 201 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 HIGD1BQ9P298 99 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 CYSLTR1Q9Y271 337 aa6.23□□□□□ -1.41
VTI1A-207ENST00000489357 TSSC4Q9Y5U2 329 aaPredicted RBP6.23□□□□□ -1.41
VTI1A-207ENST00000489357 NBEAL1Q6ZS30 2694 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 A8MWV9 139 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 F8VRH5 84 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 FGF6P10767 208 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 SPINK13Q1W4C9 94 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 DLX4Q92988 240 aaPredicted RBP6.22□□□□□ -1.41
VTI1A-207ENST00000489357 TMEM141Q96I45 108 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 RAX2Q96IS3 184 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 TIMM17AQ99595 171 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 SPXQ9BT56 116 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 HHLA3Q9XRX5 114 aa6.22□□□□□ -1.41
VTI1A-207ENST00000489357 CCL24O00175 119 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 RHODO00212 210 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 CRYGDP07320 174 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 DEFB131AP59861 70 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 ZNF415Q09FC8 603 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 HSD52Q0P140 79 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 BATFQ16520 125 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 NSUN5P1Q3KNT7 163 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 TMEM97Q5BJF2 176 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 KHDC1LQ5JSQ8 128 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 BVES-AS1Q5T3Y7 98 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 SUMO4Q6EEV6 95 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 C2orf66Q6UXQ4 117 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 STPG4Q8N801 248 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 C18orf15Q96N68 181 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 SCGB3A1Q96QR1 104 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 SPATA25Q9BR10 227 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 CSTL1Q9H114 145 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
VTI1A-207ENST00000489357 A6NDN8 102 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 CBY3A6NI87 242 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
VTI1A-207ENST00000489357 M0QY20 66 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 M0R2P5 195 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 INSP01308 110 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 HINT1P49773 126 aaPredicted RBP6.2□□□□□ -1.42
VTI1A-207ENST00000489357 CRYBA4P53673 196 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 DEFB136Q30KP8 78 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 ZNF876PQ49A33 203 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 MPV17L2Q567V2 206 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 C2orf91Q6ZV80 131 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 RPL39LQ96EH5 51 aaKnown RBP6.2□□□□□ -1.42
VTI1A-207ENST00000489357 MDFICQ9P1T7 246 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 DKK2Q9UBU2 259 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 COX11Q9Y6N1 276 aa6.2□□□□□ -1.42
VTI1A-207ENST00000489357 TRAV12-2A0A075B6T6 113 aa6.19□□□□□ -1.42
VTI1A-207ENST00000489357 SDHAF1A6NFY7 115 aa6.19□□□□□ -1.42
VTI1A-207ENST00000489357 F5H697 171 aa6.19□□□□□ -1.42
VTI1A-207ENST00000489357 ZNF25P17030 456 aaPredicted RBP6.19□□□□□ -1.42
VTI1A-207ENST00000489357 TAL2Q16559 108 aa6.19□□□□□ -1.42
VTI1A-207ENST00000489357 ZFP2Q6ZN57 461 aa6.19□□□□□ -1.42
VTI1A-207ENST00000489357 TMEM208Q9BTX3 173 aa6.19□□□□□ -1.42
VTI1A-207ENST00000489357 MCRIP2Q9BUT9 160 aaKnown RBP6.19□□□□□ -1.42
VTI1A-207ENST00000489357 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 IGIPA6NJ69 53 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 CIDEAO60543 219 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 IGKV3-20P01619 116 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 FXYD7P58549 80 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 ZNF56Q15929 161 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 BEAN1Q3B7T3 259 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 CD300EQ496F6 205 aaPredicted RBP6.18□□□□□ -1.42
VTI1A-207ENST00000489357 ZC2HC1BQ5TFG8 222 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 C18orf65Q6ZTR6 163 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 DNAJC30Q96LL9 226 aa6.18□□□□□ -1.42
VTI1A-207ENST00000489357 MRPL35Q9NZE8 188 aaKnown RBP6.18□□□□□ -1.42
VTI1A-207ENST00000489357 CHTOPQ9Y3Y2 248 aaKnown RBP6.18□□□□□ -1.42
VTI1A-207ENST00000489357 MUC4Q99102 2169 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 C9orf118A6NHY6 69 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 KNCNA6PVL3 124 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 OR11H12B2RN74 326 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 I3L3M4 83 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 CD28P10747 220 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 NMUP48645 174 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 PMVKQ15126 192 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 BAALCQ8WXS3 180 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 DUX3Q96PT4 197 aa6.17□□□□□ -1.42
VTI1A-207ENST00000489357 NOTCH1P46531 2555 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 A0A087WWL8 130 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms