RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CLUHP3Q96NS8 147 aa9.91□□□□□ -0.82
CHD1L-208ENST00000488864 SMCPP49901 116 aaPredicted RBP9.9□□□□□ -0.82
CHD1L-208ENST00000488864 FHL3Q13643 280 aa9.9□□□□□ -0.82
CHD1L-208ENST00000488864 SPANXN1Q5VSR9 72 aa9.9□□□□□ -0.82
CHD1L-208ENST00000488864 NDUFA11Q86Y39 141 aa9.9□□□□□ -0.82
CHD1L-208ENST00000488864 U3KQE9 123 aa9.9□□□□□ -0.82
CHD1L-208ENST00000488864 TRAV12-1A0A0B4J245 112 aa9.9□□□□□ -0.83
CHD1L-208ENST00000488864 A0A1B0GV72 72 aa9.9□□□□□ -0.83
CHD1L-208ENST00000488864 OR11H12B2RN74 326 aa9.9□□□□□ -0.83
CHD1L-208ENST00000488864 RPL11P62913 178 aaKnown RBP9.9□□□□□ -0.83
CHD1L-208ENST00000488864 OR11H2Q8NH07 326 aa9.9□□□□□ -0.83
CHD1L-208ENST00000488864 CITED1Q99966 193 aa9.9□□□□□ -0.83
CHD1L-208ENST00000488864 SORL1Q92673 2214 aa9.89□□□□□ -0.83
CHD1L-208ENST00000488864 H3BVH4 76 aa9.89□□□□□ -0.83
CHD1L-208ENST00000488864 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
CHD1L-208ENST00000488864 SMIM2Q9BVW6 85 aa9.89□□□□□ -0.83
CHD1L-208ENST00000488864 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
CHD1L-208ENST00000488864 LGALS9O00182 355 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 CKS1BP61024 79 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 PRR9Q5T870 116 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 SFTA2Q6UW10 78 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 IGHV4-4A0A075B6R2 117 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 K7EMT4 169 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 APOMO95445 188 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 TMEM78Q5T7P6 136 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 PLEKHB2Q96CS7 222 aa9.88□□□□□ -0.83
CHD1L-208ENST00000488864 PF4P02776 101 aa9.87□□□□□ -0.83
CHD1L-208ENST00000488864 GLMPQ8WWB7 406 aa9.87□□□□□ -0.83
CHD1L-208ENST00000488864 RPL39LQ96EH5 51 aaKnown RBP9.87□□□□□ -0.83
CHD1L-208ENST00000488864 SLC50A1Q9BRV3 221 aa9.87□□□□□ -0.83
CHD1L-208ENST00000488864 J3KRW8 73 aa9.87□□□□□ -0.83
CHD1L-208ENST00000488864 FOXI1Q12951 378 aa9.87□□□□□ -0.83
CHD1L-208ENST00000488864 NFE4Q86UQ8 179 aa9.87□□□□□ -0.83
CHD1L-208ENST00000488864 RASL10AQ92737 203 aa9.87□□□□□ -0.83
CHD1L-208ENST00000488864 TOMM6Q96B49 74 aa9.87□□□□□ -0.83
CHD1L-208ENST00000488864 PRADC1Q9BSG0 188 aa9.87□□□□□ -0.83
CHD1L-208ENST00000488864 MRPL16Q9NX20 251 aaKnown RBP9.87□□□□□ -0.83
CHD1L-208ENST00000488864 PRSS29PA6NIE9 313 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 LINC01549A6NIU2 74 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 OVOL1O14753 267 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 CFAP126Q5VTH2 177 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 ZFP2Q6ZN57 461 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 C3orf56Q8N813 242 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 CDIP1Q9H305 208 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 PEMTQ9UBM1 199 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 SYT8Q8NBV8 401 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 SPATA3Q8NHX4 192 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 BAALCQ8WXS3 180 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 MRAP2Q96G30 205 aa9.86□□□□□ -0.83
CHD1L-208ENST00000488864 PSMB2P49721 201 aa9.85□□□□□ -0.83
CHD1L-208ENST00000488864 PTH2Q96A98 100 aa9.85□□□□□ -0.83
CHD1L-208ENST00000488864 C1QTNF4Q9BXJ3 329 aa9.85□□□□□ -0.83
CHD1L-208ENST00000488864 ZNF815PA8K554 130 aa9.85□□□□□ -0.83
CHD1L-208ENST00000488864 M0R381 172 aa9.85□□□□□ -0.83
CHD1L-208ENST00000488864 SUMO2P61956 95 aaKnown RBP9.85□□□□□ -0.83
CHD1L-208ENST00000488864 C9orf47Q6ZRZ4 202 aa9.85□□□□□ -0.83
CHD1L-208ENST00000488864 TSPAN13O95857 204 aa9.84□□□□□ -0.83
CHD1L-208ENST00000488864 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
CHD1L-208ENST00000488864 LOC107984156A0A0G2JMH3 177 aa9.84□□□□□ -0.83
CHD1L-208ENST00000488864 C2orf66Q6UXQ4 117 aa9.84□□□□□ -0.83
CHD1L-208ENST00000488864 ARL17AQ8IVW1 177 aa9.84□□□□□ -0.83
CHD1L-208ENST00000488864 C14orf178Q8N769 122 aaPredicted RBP9.84□□□□□ -0.83
CHD1L-208ENST00000488864 UBE2D1P51668 147 aa9.83□□□□□ -0.84
CHD1L-208ENST00000488864 DEFB104AQ8WTQ1 72 aa9.83□□□□□ -0.84
CHD1L-208ENST00000488864 C20orf173Q96LM9 149 aa9.83□□□□□ -0.84
CHD1L-208ENST00000488864 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
CHD1L-208ENST00000488864 MT-ATP8P03928 68 aa9.83□□□□□ -0.84
CHD1L-208ENST00000488864 DEFB1P60022 68 aa9.83□□□□□ -0.84
CHD1L-208ENST00000488864 SCGB1D4Q6XE38 83 aa9.83□□□□□ -0.84
CHD1L-208ENST00000488864 DYNLRB2Q8TF09 96 aa9.83□□□□□ -0.84
CHD1L-208ENST00000488864 CARD19Q96LW7 228 aa9.83□□□□□ -0.84
CHD1L-208ENST00000488864 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHD1L-208ENST00000488864 LINC00482Q8N8I6 264 aa9.82□□□□□ -0.84
CHD1L-208ENST00000488864 MGPP08493 103 aa9.82□□□□□ -0.84
CHD1L-208ENST00000488864 EMP1P54849 157 aa9.82□□□□□ -0.84
CHD1L-208ENST00000488864 TMEM61Q8N0U2 210 aa9.82□□□□□ -0.84
CHD1L-208ENST00000488864 ATP6V0E2Q8NHE4 81 aa9.82□□□□□ -0.84
CHD1L-208ENST00000488864 C16orf92Q96LL3 132 aa9.82□□□□□ -0.84
CHD1L-208ENST00000488864 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
CHD1L-208ENST00000488864 CRYGDP07320 174 aa9.81□□□□□ -0.84
CHD1L-208ENST00000488864 SPINK8P0C7L1 97 aa9.81□□□□□ -0.84
CHD1L-208ENST00000488864 MRPL53Q96EL3 112 aaKnown RBP9.81□□□□□ -0.84
CHD1L-208ENST00000488864 MDFIQ99750 246 aa9.81□□□□□ -0.84
CHD1L-208ENST00000488864 CD7P09564 240 aa9.81□□□□□ -0.84
CHD1L-208ENST00000488864 UBE2D3P61077 147 aa9.81□□□□□ -0.84
CHD1L-208ENST00000488864 UBE2D2P62837 147 aa9.81□□□□□ -0.84
CHD1L-208ENST00000488864 DUSP14O95147 198 aaKnown RBP9.8□□□□□ -0.84
CHD1L-208ENST00000488864 XGP55808 180 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 DEFB114Q30KQ6 69 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 DPH3P1Q9H4G8 78 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 PKD1L1Q8TDX9 2849 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 TMEM238LA0A1B0GVL6 79 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 C11orf86A6NJI1 115 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 A6NJY4 79 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 TSHBP01222 138 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 CRYBA4P53673 196 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 ZFAND2AQ8N6M9 145 aa9.8□□□□□ -0.84
CHD1L-208ENST00000488864 TCL1BO95988 128 aa9.79□□□□□ -0.84
CHD1L-208ENST00000488864 DCANP1Q8TF63 244 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms