RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 TYMSP04818 313 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 OR5AL1P0C617 328 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 TLX1NBP0CAT3 122 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 RPL36AP83881 106 aaKnown RBP1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 PPP1R1AQ13522 171 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 ZFP69Q49AA0 526 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 SMUG1Q53HV7 270 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 SDIM1Q6ZPB5 146 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 FMC1Q96HJ9 113 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 NPCDR1Q9BY65 106 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 WDR61Q9GZS3 305 aaKnown RBP1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 NAGKQ9UJ70 344 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 RPH3ALQ9UNE2 315 aa1.73□□□□□ -2.13
DEPDC1-203ENST00000488146 RPL37AP8A6NKH3 93 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 ASIPP42127 132 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 FXYD7P58549 80 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 S100A10P60903 97 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 BTN1A1Q13410 526 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 SP6Q3SY56 376 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 LGALSLQ3ZCW2 172 aaPredicted RBP1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 ZNF876PQ49A33 203 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 SCGB2B2Q4G0G5 96 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 SPANXN5Q5MJ07 72 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 CIRBP-AS1Q8TBR5 109 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 TNFSF18Q9UNG2 199 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 HSPB11Q9Y547 144 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 URGCP-MRPS24S4R325 110 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 V9GYH0 126 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 TRAV12-2A0A075B6T6 113 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 A0A087WYN8 130 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 TRBV6-8A0A0A6YYG3 113 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 RNASE4P34096 147 aaKnown RBP1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 RPL32P62910 135 aaKnown RBP1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 OR10J3Q5JRS4 329 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 RNF182Q8N6D2 247 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 TMEM252Q8N6L7 170 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 SLC25A29Q8N8R3 303 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 SLC25A22Q9H936 323 aa1.72□□□□□ -2.13
DEPDC1-203ENST00000488146 TRBV7-3A0A075B6L6 115 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 IGHV1-24A0A0C4DH33 117 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 FABP5P3A8MUU1 101 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 KRBOX1C9JBD0 128 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 F6UZH7 168 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 H3BTX0 84 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 CXorf1O96002 111 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 CRPP02741 224 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 CFC1BP0CG36 223 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 CFC1P0CG37 223 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 STAG3L2P0CL84 134 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 STAG3L3P0CL85 134 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 IAPPP10997 89 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 FGF7P21781 194 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 S100A5P33763 92 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 RPS29P62273 56 aaKnown RBP1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 RIGQ13278 110 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 NEDD8Q15843 81 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 FAM229BQ4G0N7 80 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 SPANXN2Q5MJ10 180 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 CMTM2Q8TAZ6 248 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 DIRAS2Q96HU8 199 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 TIMM21Q9BVV7 248 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 CNFNQ9BYD5 112 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 Q9HAA7 133 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 GSKIPQ9P0R6 139 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 CSDC2Q9Y534 153 aaKnown RBP1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 IGHV1-58A0A0C4DH39 117 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 A0A0J9YY99 117 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 SSSCA1O60232 199 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 NCS1P62166 190 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 TWIST1Q15672 202 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 SPINK9Q5DT21 86 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 ZNF506Q5JVG8 444 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 TEX261Q6UWH6 196 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 FP248Q71RG6 208 aaPredicted RBP1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 NOTCH2NLQ7Z3S9 236 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 MRPL52Q86TS9 123 aaKnown RBP1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 MCFD2Q8NI22 146 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 S100ZQ8WXG8 99 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 SAMD10Q9BYL1 202 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 MCUBQ9NWR8 336 aa1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 MRPL16Q9NX20 251 aaKnown RBP1.71□□□□□ -2.14
DEPDC1-203ENST00000488146 TRBV6-5A0A0K0K1A5 114 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 G3V3Q6 166 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 PPP1R17O96001 155 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 IGKV3-20P01619 116 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 IGHV3-48P01763 117 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 TCRAP04437 139 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 RNASE3P12724 160 aaKnown RBP1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 RRAS2P62070 204 aaPredicted RBP1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 FAM162BQ5T6X4 162 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 PRR9Q5T870 116 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 DIRC1Q969H9 104 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 CYTL1Q9NRR1 136 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 MBD2Q9UBB5 411 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 TP73-AS1Q9UF72 201 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 TRBV25-1A0A075B6N4 114 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 LINC00854A0A1B0GVQ3 168 aa1.7□□□□□ -2.14
DEPDC1-203ENST00000488146 C7orf66A4D0T2 115 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms