RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 MYLKQ15746 1914 aa1.87□□□□□ -2.11
FN1-222ENST00000485567 MUC22E2RYF6 1773 aaPredicted RBP1.87□□□□□ -2.11
FN1-222ENST00000485567 POLA1P09884 1462 aaPredicted RBP1.87□□□□□ -2.11
FN1-222ENST00000485567 FREM3P0C091 2139 aa1.87□□□□□ -2.11
FN1-222ENST00000485567 ARHGEF12Q9NZN5 1544 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 LRRIQ1Q96JM4 1722 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 TRBV6-8A0A0A6YYG3 113 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 TRAV22A0A0B4J277 110 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 TRBV10-1A0A0K0K1A3 114 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 H3BUT2 72 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 NDUFC1O43677 76 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 C10orf128Q5T292 105 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 Q5VV11 94 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 CYP2G1PQ6ZSU1 146 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 PATE1Q8WXA2 126 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 MRPL36Q9P0J6 103 aaKnown RBP1.86□□□□□ -2.11
FN1-222ENST00000485567 ADAMTS7Q9UKP4 1686 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 TRPM7Q96QT4 1865 aa1.86□□□□□ -2.11
FN1-222ENST00000485567 LAMB4A4D0S4 1761 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 MED13Q9UHV7 2174 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 SHROOM2Q13796 1616 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 IGKV3-7A0A075B6H7 116 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 TRBV7-3A0A075B6L6 115 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 NUPR2A6NF83 97 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 J3QRE1 110 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 UBE2D1P51668 147 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 UBE2D3P61077 147 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 UBE2D2P62837 147 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 ELOBQ15370 118 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 LINC00299Q6ZSB3 139 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 FAM223AQ8IWN6 122 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 PCNX2A6NKB5 2137 aa1.85□□□□□ -2.11
FN1-222ENST00000485567 MYO16Q9Y6X6 1858 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 FANCAO15360 1455 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 PXDNQ92626 1479 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 MLH3Q9UHC1 1453 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 CLPSL1A2RUU4 121 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 CHKB-CPT1BH3BT56 60 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 EFNA4P52798 201 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 PMCHL1Q16048 86 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 SPATA45Q537H7 98 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 HEPN1Q6WQI6 88 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 ZNF818PQ6ZRF7 136 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 Q8N6K4 173 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 DMAC1Q96GE9 116 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 FAM167A-AS1Q96KT0 104 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 ORMDL1Q9P0S3 153 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 PRO1854Q9UHT4 67 aa1.84□□□□□ -2.11
FN1-222ENST00000485567 CDK13Q14004 1512 aaKnown RBP1.84□□□□□ -2.11
FN1-222ENST00000485567 PLXNA2O75051 1894 aa1.84□□□□□ -2.12
FN1-222ENST00000485567 DOCK1Q14185 1865 aa1.84□□□□□ -2.12
FN1-222ENST00000485567 TNS1Q9HBL0 1735 aaKnown RBP1.83□□□□□ -2.12
FN1-222ENST00000485567 KIAA1549LQ6ZVL6 1849 aa1.83□□□□□ -2.12
FN1-222ENST00000485567 C10orf142B7Z368 130 aa1.83□□□□□ -2.12
FN1-222ENST00000485567 VMO1Q7Z5L0 202 aa1.83□□□□□ -2.12
FN1-222ENST00000485567 NDUFA11Q86Y39 141 aa1.83□□□□□ -2.12
FN1-222ENST00000485567 PTPRFP10586 1907 aa1.83□□□□□ -2.12
FN1-222ENST00000485567 ATP10BO94823 1461 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 TRAV23DV6A0A075B6W5 121 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 A0A0J9YY99 117 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 EDDM3BP56851 147 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 KRTAP6-3Q3LI67 103 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 C18orf32Q8TCD1 76 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 S100ZQ8WXG8 99 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 MICAL3Q7RTP6 2002 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 COL4A5P29400 1685 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 RP1P56715 2156 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 COL11A1P12107 1806 aaPredicted RBP1.82□□□□□ -2.12
FN1-222ENST00000485567 ANKARQ7Z5J8 1434 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 ANK1P16157 1881 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 PLXNA4Q9HCM2 1894 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 NRXN1Q9ULB1 1477 aa1.82□□□□□ -2.12
FN1-222ENST00000485567 MAGI3Q5TCQ9 1506 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 KIF14Q15058 1648 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 LAMB1P07942 1786 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 F2Z2F3 143 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 PPYP01298 95 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 IGLV3-1P01715 115 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 KRTAP10-1P60331 282 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 KLKP1Q107X0 134 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 C20orf197Q8N268 126 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 LINC01600Q96MT4 127 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 LTBP2Q14767 1821 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 ZFHX2Q9C0A1 2572 aaPredicted RBP1.81□□□□□ -2.12
FN1-222ENST00000485567 NCOA2Q15596 1464 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 UGGT2Q9NYU1 1516 aa1.81□□□□□ -2.12
FN1-222ENST00000485567 THOC2Q8NI27 1593 aaKnown RBP1.81□□□□□ -2.12
FN1-222ENST00000485567 MYO18AQ92614 2054 aaKnown RBP1.8□□□□□ -2.12
FN1-222ENST00000485567 TRGV4A0A0C4DH28 118 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 TRBV6-4A0A1B0GX49 114 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 KANTRA0A1W2PQU2 76 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 IGHV3-30P01768 117 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 IGHV3-30-5P0DP03 117 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 SNRPFP62306 86 aaKnown RBP1.8□□□□□ -2.12
FN1-222ENST00000485567 NUMA1Q14980 2115 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 ZNF56Q15929 161 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 CFAP126Q5VTH2 177 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 C4orf3Q8WVX3 66 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms