RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 CEP295Q9C0D2 2601 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 WNK3Q9BYP7 1800 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 CFAP46Q8IYW2 2715 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 UHRF1BP1LA0JNW5 1464 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 LOC107984640A0A0U1RRK4 108 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 LOC730098B7Z3J9 87 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 PPP5D1E7EU14 171 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 C3orf33Q6P1S2 294 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 DCUN1D2Q6PH85 259 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 C20orf197Q8N268 126 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 SMIM20Q8N5G0 67 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 DYNLRB2Q8TF09 96 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 MED31Q9Y3C7 131 aa-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 EIF3AQ14152 1382 aaKnown RBP-0.96□□□□□ -2.56
SFPQ-209ENST00000485454 NRXN2Q9P2S2 1712 aa-0.97□□□□□ -2.56
SFPQ-209ENST00000485454 SLC25A6P12236 298 aa-0.97□□□□□ -2.56
SFPQ-209ENST00000485454 S100A3P33764 101 aa-0.97□□□□□ -2.56
SFPQ-209ENST00000485454 CRYBA4P53673 196 aa-0.97□□□□□ -2.56
SFPQ-209ENST00000485454 PSPHP78330 225 aa-0.97□□□□□ -2.56
SFPQ-209ENST00000485454 DCDP81605 110 aaKnown RBP-0.97□□□□□ -2.56
SFPQ-209ENST00000485454 SLC35B3Q9H1N7 401 aa-0.97□□□□□ -2.56
SFPQ-209ENST00000485454 STOML2Q9UJZ1 356 aa-0.97□□□□□ -2.56
SFPQ-209ENST00000485454 ZNF609O15014 1411 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 C10orf71Q711Q0 1435 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 SIPA1L3O60292 1781 aaPredicted RBP-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 CASZ1Q86V15 1759 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 LRRK2Q5S007 2527 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 A0A1B0GW64 132 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 E7EQ34 232 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 TFF1P04155 84 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 SPCS2Q15005 226 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 BOLA2Q9H3K6 86 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 TACC2O95359 2948 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 MED23Q9ULK4 1368 aa-0.98□□□□□ -2.57
SFPQ-209ENST00000485454 PLXNB2O15031 1838 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 DNAJC13O75165 2243 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 MYO15AQ9UKN7 3530 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 SVEP1Q4LDE5 3571 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 BORCS7-ASMTA0A0B4J1R7 106 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 M0QZK8 103 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 NPFFO15130 113 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 YPEL1O60688 119 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 SLC25A5P05141 298 aaKnown RBP-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 SMIM6P0DI80 62 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 SERPINB1P30740 379 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 SPRR2AP35326 72 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 NPC2P61916 151 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 ATP6V0E2Q8NHE4 81 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 WFDC6Q9BQY6 131 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 KDM3BQ7LBC6 1761 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 PRKDCP78527 4128 aaKnown RBP-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 ARHGAP31Q2M1Z3 1444 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 PTPRMP28827 1452 aa-0.99□□□□□ -2.57
SFPQ-209ENST00000485454 SYNMO15061 1565 aa-1□□□□□ -2.57
SFPQ-209ENST00000485454 TRAV1-2A0A0B4J238 106 aa-1□□□□□ -2.57
SFPQ-209ENST00000485454 POLR2HP52434 150 aaKnown RBP-1□□□□□ -2.57
SFPQ-209ENST00000485454 TMEM78Q5T7P6 136 aa-1□□□□□ -2.57
SFPQ-209ENST00000485454 HRCT1Q6UXD1 115 aa-1□□□□□ -2.57
SFPQ-209ENST00000485454 STX12Q86Y82 276 aa-1□□□□□ -2.57
SFPQ-209ENST00000485454 THEM6Q8WUY1 208 aa-1□□□□□ -2.57
SFPQ-209ENST00000485454 NOP16Q9Y3C1 178 aaKnown RBP-1□□□□□ -2.57
SFPQ-209ENST00000485454 TRAV12-3A0A0B4J271 114 aa-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 RBP4P02753 201 aa-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 TCRAP04437 139 aa-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 EDDM3BP56851 147 aa-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 RBM3P98179 157 aaKnown RBP-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 SNX29P2Q8IUI4 249 aa-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 CHMP6Q96FZ7 201 aa-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 TP53AIP1Q9HCN2 124 aa-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 ROCK1Q13464 1354 aa-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 ARFGEF1Q9Y6D6 1849 aa-1.01□□□□□ -2.57
SFPQ-209ENST00000485454 A0A1W2PRE2 83 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 H0YJX3 145 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 TSC2P49815 1807 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 ZMYM4Q5VZL5 1548 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 TMEM91Q6ZNR0 172 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 ATP11AUNQ6ZP68 121 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 BAGE3Q86Y29 109 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 OR9Q1Q8NGQ5 310 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 CCDC115Q96NT0 180 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 SCN3BQ9NY72 215 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 IFT172Q9UG01 1749 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 ATPIF1Q9UII2 106 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 TRAPPC2LQ9UL33 140 aa-1.02□□□□□ -2.57
SFPQ-209ENST00000485454 IBTKQ9P2D0 1353 aaPredicted RBP-1.03□□□□□ -2.57
SFPQ-209ENST00000485454 J3QLW9 94 aa-1.03□□□□□ -2.57
SFPQ-209ENST00000485454 M0R2T5 61 aa-1.03□□□□□ -2.57
SFPQ-209ENST00000485454 PIGYQ3MUY2 71 aa-1.03□□□□□ -2.57
SFPQ-209ENST00000485454 GOLGA4Q13439 2230 aaKnown RBP-1.03□□□□□ -2.57
SFPQ-209ENST00000485454 FXYD6-FXYD2A0A087WZ82 144 aa-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 SPINK4O60575 86 aa-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 BCE1O60756 84 aa-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 SMIM24O75264 130 aa-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 COX6B1P14854 86 aa-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 CFAP126Q5VTH2 177 aa-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 SPAG11AQ6PDA7 123 aa-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 MAGOHBQ96A72 148 aaKnown RBP-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 DNAJC15Q9Y5T4 150 aa-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 TLN1Q9Y490 2541 aaKnown RBP-1.04□□□□□ -2.58
SFPQ-209ENST00000485454 LAMA3Q16787 3333 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms