RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 C14orf178Q8N769 122 aaPredicted RBP10.08□□□□□ -0.8
USP11-207ENST00000478596 ZNF479Q96JC4 524 aa10.08□□□□□ -0.8
USP11-207ENST00000478596 BTF3L4Q96K17 158 aa10.08□□□□□ -0.8
USP11-207ENST00000478596 MSRB1Q9NZV6 116 aa10.08□□□□□ -0.8
USP11-207ENST00000478596 A0A1B0GW15 77 aa10.07□□□□□ -0.8
USP11-207ENST00000478596 XGP55808 180 aa10.07□□□□□ -0.8
USP11-207ENST00000478596 WDR73Q6P4I2 378 aa10.07□□□□□ -0.8
USP11-207ENST00000478596 IMMP2LQ96T52 175 aa10.07□□□□□ -0.8
USP11-207ENST00000478596 CNFNQ9BYD5 112 aa10.07□□□□□ -0.8
USP11-207ENST00000478596 DPH3P1Q9H4G8 78 aa10.07□□□□□ -0.8
USP11-207ENST00000478596 S100A1P23297 94 aa10.06□□□□□ -0.8
USP11-207ENST00000478596 FOXA3P55318 350 aaPredicted RBP10.06□□□□□ -0.8
USP11-207ENST00000478596 ATP5L2Q7Z4Y8 100 aa10.06□□□□□ -0.8
USP11-207ENST00000478596 SAMD10Q9BYL1 202 aa10.06□□□□□ -0.8
USP11-207ENST00000478596 TMEM242Q9NWH2 141 aa10.06□□□□□ -0.8
USP11-207ENST00000478596 A0A0J9YY99 117 aa10.05□□□□□ -0.8
USP11-207ENST00000478596 CIDEAO60543 219 aa10.05□□□□□ -0.8
USP11-207ENST00000478596 EVI2AP22794 236 aa10.05□□□□□ -0.8
USP11-207ENST00000478596 ATRAIDQ6UW56 229 aa10.05□□□□□ -0.8
USP11-207ENST00000478596 TRAV9-1A0A075B6T8 112 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 TRAV26-1A0A087WT03 109 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 PAX4O43316 350 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 HOXA5P20719 270 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 SLAQ13239 276 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 TMEM88Q6PEY1 159 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 ZFP2Q6ZN57 461 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 CBLN2Q8IUK8 224 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 PRADC1Q9BSG0 188 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 SMCO4Q9NRQ5 59 aa10.04□□□□□ -0.8
USP11-207ENST00000478596 K7EQD1 137 aa10.03□□□□□ -0.8
USP11-207ENST00000478596 BTF3P20290 206 aaKnown RBP10.03□□□□□ -0.8
USP11-207ENST00000478596 RHOHQ15669 191 aa10.03□□□□□ -0.8
USP11-207ENST00000478596 ZNRF2Q8NHG8 242 aa10.03□□□□□ -0.8
USP11-207ENST00000478596 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
USP11-207ENST00000478596 HHLA3Q9XRX5 114 aa10.03□□□□□ -0.8
USP11-207ENST00000478596 H7C1H1 209 aa10.02□□□□□ -0.81
USP11-207ENST00000478596 NUDT3O95989 172 aa10.02□□□□□ -0.81
USP11-207ENST00000478596 CRYGDP07320 174 aa10.02□□□□□ -0.81
USP11-207ENST00000478596 GATA1P15976 413 aaPredicted RBP10.02□□□□□ -0.81
USP11-207ENST00000478596 TMEM191AQ9H0A3 160 aa10.02□□□□□ -0.81
USP11-207ENST00000478596 FHL2Q14192 279 aa10.01□□□□□ -0.81
USP11-207ENST00000478596 AMN1Q8IY45 258 aa10.01□□□□□ -0.81
USP11-207ENST00000478596 ICOSQ9Y6W8 199 aa10.01□□□□□ -0.81
USP11-207ENST00000478596 TGIF2-C20orf24A0A0A6YYL0 155 aa10□□□□□ -0.81
USP11-207ENST00000478596 A0A1B0GXF2 115 aa10□□□□□ -0.81
USP11-207ENST00000478596 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
USP11-207ENST00000478596 GYPEP15421 78 aa10□□□□□ -0.81
USP11-207ENST00000478596 CRYBA4P53673 196 aa10□□□□□ -0.81
USP11-207ENST00000478596 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
USP11-207ENST00000478596 TRAV26-2A0A0B4J265 109 aa9.99□□□□□ -0.81
USP11-207ENST00000478596 TRBV6-4A0A1B0GX49 114 aa9.99□□□□□ -0.81
USP11-207ENST00000478596 SRIP30626 198 aa9.99□□□□□ -0.81
USP11-207ENST00000478596 UFSP1Q6NVU6 142 aa9.99□□□□□ -0.81
USP11-207ENST00000478596 RASL11AQ6T310 242 aa9.99□□□□□ -0.81
USP11-207ENST00000478596 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
USP11-207ENST00000478596 C15orf53Q8NAA6 179 aa9.99□□□□□ -0.81
USP11-207ENST00000478596 GAGE12JA6NER3 117 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 SCO1O75880 301 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 NCR2O95944 276 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 RPL36AP83881 106 aaKnown RBP9.98□□□□□ -0.81
USP11-207ENST00000478596 GAGE1Q13065 139 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 GAGE4Q13068 117 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 GAGE5Q13069 117 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 ELOBQ15370 118 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 COX19Q49B96 90 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 GAGE13Q4V321 117 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.98□□□□□ -0.81
USP11-207ENST00000478596 RPL36ALQ969Q0 106 aaKnown RBP9.98□□□□□ -0.81
USP11-207ENST00000478596 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
USP11-207ENST00000478596 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
USP11-207ENST00000478596 FAM229AH3BQW9 127 aa9.97□□□□□ -0.81
USP11-207ENST00000478596 HLA-DQA1P01909 254 aa9.97□□□□□ -0.81
USP11-207ENST00000478596 OR10J3Q5JRS4 329 aa9.97□□□□□ -0.81
USP11-207ENST00000478596 Q6ZSN1 163 aa9.97□□□□□ -0.81
USP11-207ENST00000478596 MRAP2Q96G30 205 aa9.97□□□□□ -0.81
USP11-207ENST00000478596 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
USP11-207ENST00000478596 TNFRSF18Q9Y5U5 241 aa9.97□□□□□ -0.81
USP11-207ENST00000478596 A0A096LPF7 62 aa9.96□□□□□ -0.82
USP11-207ENST00000478596 SMKR1H3BMG3 65 aa9.96□□□□□ -0.82
USP11-207ENST00000478596 MT-ND6P03923 174 aa9.96□□□□□ -0.82
USP11-207ENST00000478596 CKS2P33552 79 aa9.96□□□□□ -0.82
USP11-207ENST00000478596 MRPL23Q16540 153 aaKnown RBP9.96□□□□□ -0.82
USP11-207ENST00000478596 FAM104BQ5XKR9 115 aa9.96□□□□□ -0.82
USP11-207ENST00000478596 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.82
USP11-207ENST00000478596 RNF213Q63HN8 5207 aa9.95□□□□□ -0.82
USP11-207ENST00000478596 TRBV10-1A0A0K0K1A3 114 aa9.95□□□□□ -0.82
USP11-207ENST00000478596 APCSP02743 223 aa9.95□□□□□ -0.82
USP11-207ENST00000478596 RAB4AP20338 218 aa9.95□□□□□ -0.82
USP11-207ENST00000478596 MRPL51Q4U2R6 128 aaKnown RBP9.95□□□□□ -0.82
USP11-207ENST00000478596 TMEM136Q6ZRR5 245 aa9.95□□□□□ -0.82
USP11-207ENST00000478596 VSIG2Q96IQ7 327 aa9.95□□□□□ -0.82
USP11-207ENST00000478596 TRBV24-1A0A075B6N3 115 aa9.94□□□□□ -0.82
USP11-207ENST00000478596 D6R8Y8 96 aa9.94□□□□□ -0.82
USP11-207ENST00000478596 H3BNG1 76 aa9.94□□□□□ -0.82
USP11-207ENST00000478596 SMR3BP02814 79 aaPredicted RBP9.94□□□□□ -0.82
USP11-207ENST00000478596 LINC00315P59091 139 aa9.94□□□□□ -0.82
USP11-207ENST00000478596 GATD1Q8NB37 220 aa9.94□□□□□ -0.82
USP11-207ENST00000478596 RPL39LQ96EH5 51 aaKnown RBP9.94□□□□□ -0.82
USP11-207ENST00000478596 RNF185Q96GF1 192 aa9.94□□□□□ -0.82
USP11-207ENST00000478596 GNB1LQ9BYB4 327 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms