RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 UFSP1Q6NVU6 142 aa8.07□□□□□ -1.12
LSM2-212ENST00000477182 TMEM191AQ9H0A3 160 aa8.07□□□□□ -1.12
LSM2-212ENST00000477182 DPH3P1Q9H4G8 78 aa8.07□□□□□ -1.12
LSM2-212ENST00000477182 DNAH5Q8TE73 4624 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 TRBV24-1A0A075B6N3 115 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 TRGV4A0A0C4DH28 118 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 EPM2AB3EWF7 344 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 F5H768 121 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 INAFM2P0DMQ5 153 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 LINC00315P59091 139 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 RAB4BP61018 213 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 FHL2Q14192 279 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 ZNF56Q15929 161 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 ZFP2Q6ZN57 461 aa8.06□□□□□ -1.12
LSM2-212ENST00000477182 IGLV2-18A0A075B6J9 118 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 DEFB131BA0A096LNP1 70 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 F5H697 171 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 CIDEAO60543 219 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 GATA1P15976 413 aaPredicted RBP8.05□□□□□ -1.12
LSM2-212ENST00000477182 RASL11AQ6T310 242 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 Q6ZSN1 163 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 UBE2DNLQ8IWF7 75 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 AMN1Q8IY45 258 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 GATD1Q8NB37 220 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 FAM210BQ96KR6 192 aa8.05□□□□□ -1.12
LSM2-212ENST00000477182 FAM104BQ5XKR9 115 aa8.04□□□□□ -1.12
LSM2-212ENST00000477182 TMEM136Q6ZRR5 245 aa8.04□□□□□ -1.12
LSM2-212ENST00000477182 RNF185Q96GF1 192 aa8.04□□□□□ -1.12
LSM2-212ENST00000477182 TRAV26-2A0A0B4J265 109 aa8.03□□□□□ -1.12
LSM2-212ENST00000477182 RAB4AP20338 218 aa8.03□□□□□ -1.12
LSM2-212ENST00000477182 SUMO4Q6EEV6 95 aa8.03□□□□□ -1.12
LSM2-212ENST00000477182 SLC25A29Q8N8R3 303 aa8.03□□□□□ -1.12
LSM2-212ENST00000477182 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
LSM2-212ENST00000477182 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
LSM2-212ENST00000477182 TRAV26-1A0A087WT03 109 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 A0A0J9YY99 117 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 COLCA2A8K830 154 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 K7EQD1 137 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 PAX4O43316 350 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 HLA-DQA1P01909 254 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 CRYBA4P53673 196 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 TNP2Q05952 138 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 SLAQ13239 276 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 COX19Q49B96 90 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 MRPL51Q4U2R6 128 aaKnown RBP8.02□□□□□ -1.13
LSM2-212ENST00000477182 GNB1LQ9BYB4 327 aa8.02□□□□□ -1.13
LSM2-212ENST00000477182 LOC100131303A0A0U1RQF7 123 aa8.01□□□□□ -1.13
LSM2-212ENST00000477182 TRBV6-4A0A1B0GX49 114 aa8.01□□□□□ -1.13
LSM2-212ENST00000477182 SMKR1H3BMG3 65 aa8.01□□□□□ -1.13
LSM2-212ENST00000477182 M0QY20 66 aa8.01□□□□□ -1.13
LSM2-212ENST00000477182 NCR2O95944 276 aa8.01□□□□□ -1.13
LSM2-212ENST00000477182 RHOHQ15669 191 aa8.01□□□□□ -1.13
LSM2-212ENST00000477182 VSIG2Q96IQ7 327 aa8.01□□□□□ -1.13
LSM2-212ENST00000477182 Q9UF83 564 aa8.01□□□□□ -1.13
LSM2-212ENST00000477182 H7C1H1 209 aa8□□□□□ -1.13
LSM2-212ENST00000477182 GAS8-AS1O95177 125 aa8□□□□□ -1.13
LSM2-212ENST00000477182 APCSP02743 223 aa8□□□□□ -1.13
LSM2-212ENST00000477182 MT-ND6P03923 174 aa8□□□□□ -1.13
LSM2-212ENST00000477182 KIAA1644Q3SXP7 199 aa8□□□□□ -1.13
LSM2-212ENST00000477182 FRZBQ92765 325 aa8□□□□□ -1.13
LSM2-212ENST00000477182 RPL39LQ96EH5 51 aaKnown RBP8□□□□□ -1.13
LSM2-212ENST00000477182 MRAP2Q96G30 205 aa8□□□□□ -1.13
LSM2-212ENST00000477182 PRADC1Q9BSG0 188 aa8□□□□□ -1.13
LSM2-212ENST00000477182 MRPL18Q9H0U6 180 aaKnown RBP8□□□□□ -1.13
LSM2-212ENST00000477182 TRAPPC1Q9Y5R8 145 aa8□□□□□ -1.13
LSM2-212ENST00000477182 SRRM2Q9UQ35 2752 aaKnown RBP8□□□□□ -1.13
LSM2-212ENST00000477182 D6R8Y8 96 aa7.99□□□□□ -1.13
LSM2-212ENST00000477182 GYPEP15421 78 aa7.99□□□□□ -1.13
LSM2-212ENST00000477182 RAB5AP20339 215 aa7.99□□□□□ -1.13
LSM2-212ENST00000477182 CKS2P33552 79 aa7.99□□□□□ -1.13
LSM2-212ENST00000477182 RPS10P46783 165 aaKnown RBP7.99□□□□□ -1.13
LSM2-212ENST00000477182 FABP9Q0Z7S8 132 aa7.99□□□□□ -1.13
LSM2-212ENST00000477182 NEXN-AS1Q8NBZ9 246 aa7.99□□□□□ -1.13
LSM2-212ENST00000477182 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
LSM2-212ENST00000477182 TRBV10-1A0A0K0K1A3 114 aa7.98□□□□□ -1.13
LSM2-212ENST00000477182 GAGE12JA6NER3 117 aa7.98□□□□□ -1.13
LSM2-212ENST00000477182 GAGE1Q13065 139 aa7.98□□□□□ -1.13
LSM2-212ENST00000477182 GAGE4Q13068 117 aa7.98□□□□□ -1.13
LSM2-212ENST00000477182 GAGE5Q13069 117 aa7.98□□□□□ -1.13
LSM2-212ENST00000477182 GAGE13Q4V321 117 aa7.98□□□□□ -1.13
LSM2-212ENST00000477182 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.98□□□□□ -1.13
LSM2-212ENST00000477182 H3BNG1 76 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 PPBPP02775 128 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 RPL36AP83881 106 aaKnown RBP7.97□□□□□ -1.13
LSM2-212ENST00000477182 OR10J3Q5JRS4 329 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 ORMDL3Q8N138 153 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 NRACQ8N912 160 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 ZNRF2Q8NHG8 242 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 RPL36ALQ969Q0 106 aaKnown RBP7.97□□□□□ -1.13
LSM2-212ENST00000477182 PRELID3AQ96N28 172 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 NIT2Q9NQR4 276 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 TNFRSF18Q9Y5U5 241 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 ICOSQ9Y6W8 199 aa7.97□□□□□ -1.13
LSM2-212ENST00000477182 A0A096LPF7 62 aa7.96□□□□□ -1.14
LSM2-212ENST00000477182 NUDT3O95989 172 aa7.96□□□□□ -1.14
LSM2-212ENST00000477182 NPYP01303 97 aa7.96□□□□□ -1.14
LSM2-212ENST00000477182 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.14
LSM2-212ENST00000477182 DNAJC30Q96LL9 226 aa7.96□□□□□ -1.14
LSM2-212ENST00000477182 TRBV7-3A0A075B6L6 115 aa7.95□□□□□ -1.14
LSM2-212ENST00000477182 TNFRSF6BO95407 300 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms