RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 MYO18AQ92614 2054 aaKnown RBP0.85□□□□□ -2.27
NPHP3-207ENST00000476742 SCN11AQ9UI33 1791 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 NLRP1Q9C000 1473 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 ABCA10Q8WWZ4 1543 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 ARHGEF28Q8N1W1 1705 aaKnown RBP0.84□□□□□ -2.27
NPHP3-207ENST00000476742 MDC1Q14676 2089 aaKnown RBP0.84□□□□□ -2.27
NPHP3-207ENST00000476742 TCHHQ07283 1943 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 ABCC5O15440 1437 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 BLMP54132 1417 aaPredicted RBP0.84□□□□□ -2.27
NPHP3-207ENST00000476742 EDC4Q6P2E9 1401 aaKnown RBP0.84□□□□□ -2.27
NPHP3-207ENST00000476742 IGKV1D-42A0A075B6H8 117 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 TRAV23DV6A0A075B6W5 121 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 IGKV2D-26A0A0A0MRZ7 120 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 A0A0D9SFI3 127 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 LOC285095A0A1B0GVY8 99 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 A0A1B0GWA3 101 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 TMEM30CPA0ZSE6 113 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 ZNF815PA8K554 130 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 IBA57-AS1B1ANH7 110 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 F2Z2F3 143 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 C5orf67F2Z3F1 127 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 SNRNP200O75643 2136 aaKnown RBP0.84□□□□□ -2.27
NPHP3-207ENST00000476742 SFTA3P0C7M3 94 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 ASAH2BP0C7U1 165 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 DEFA4P12838 97 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 EDDM3BP56851 147 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 ROMO1P60602 79 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 MIR22HGQ0VDD5 57 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 ELOBQ15370 118 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 ZNF56Q15929 161 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 TPRXLQ17RH7 258 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 ZNF826PQ6ZT77 177 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 NDUFA11Q86Y39 141 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 Q8IYB0 196 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 CLECL1Q8IZS7 167 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 LIMD2Q9BT23 127 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 PRO2289Q9P1D8 64 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 GNG13Q9P2W3 67 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 PRO1854Q9UHT4 67 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 ARL2-SNX15V9GYD0 113 aa0.84□□□□□ -2.27
NPHP3-207ENST00000476742 PTPRBP23467 1997 aa0.84□□□□□ -2.28
NPHP3-207ENST00000476742 GOLGA3Q08378 1498 aa0.84□□□□□ -2.28
NPHP3-207ENST00000476742 IQSEC2Q5JU85 1478 aa0.84□□□□□ -2.28
NPHP3-207ENST00000476742 UGGT2Q9NYU1 1516 aa0.84□□□□□ -2.28
NPHP3-207ENST00000476742 SPHKAPQ2M3C7 1700 aa0.84□□□□□ -2.28
NPHP3-207ENST00000476742 MARF1Q9Y4F3 1742 aaKnown RBP0.84□□□□□ -2.28
NPHP3-207ENST00000476742 PTPRSQ13332 1948 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 GREB1Q4ZG55 1949 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 ADGRB1O14514 1584 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 PPLO60437 1756 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 RGPD4Q7Z3J3 1758 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 PARP14Q460N5 1801 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 MICAL3Q7RTP6 2002 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 A0A087WSZ3 146 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 TRBV7-1A0A0A6YYK4 115 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 A0A0G2JND7 137 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 CHKB-CPT1BH3BT56 60 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 LEPROTL1O95214 131 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 IGLV1-51P01701 117 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 LYNX1P0DP58 116 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 PRB4P10163 310 aaPredicted RBP0.83□□□□□ -2.28
NPHP3-207ENST00000476742 MIFP14174 115 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 CFAP126Q5VTH2 177 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 Q6ZRN7 208 aaPredicted RBP0.83□□□□□ -2.28
NPHP3-207ENST00000476742 Q6ZTI0 123 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 COA5Q86WW8 74 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 FAM19A2Q8N3H0 131 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 PPP1R1CQ8WVI7 109 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 AMELYQ99218 206 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 CDC42SE1Q9NRR8 79 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 LINC00474Q9P2X8 69 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 ATP10BO94823 1461 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 NCOA2Q15596 1464 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 CDK12Q9NYV4 1490 aaPredicted RBP0.83□□□□□ -2.28
NPHP3-207ENST00000476742 ZC3H13Q5T200 1668 aaKnown RBP0.83□□□□□ -2.28
NPHP3-207ENST00000476742 NUMA1Q14980 2115 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 PEAK1Q9H792 1746 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 ABCC1P33527 1531 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 MAGI3Q5TCQ9 1506 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 FLG2Q5D862 2391 aaPredicted RBP0.83□□□□□ -2.28
NPHP3-207ENST00000476742 ADAMTS12P58397 1594 aa0.83□□□□□ -2.28
NPHP3-207ENST00000476742 SBF2Q86WG5 1849 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 ANK1P16157 1881 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 PLXNA4Q9HCM2 1894 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 NYNRINQ9P2P1 1898 aaKnown RBP0.82□□□□□ -2.28
NPHP3-207ENST00000476742 QRICH2Q9H0J4 1663 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 MLH3Q9UHC1 1453 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 ABCA3Q99758 1704 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 TRBV7-3A0A075B6L6 115 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 TRBV25-1A0A075B6N4 114 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 TRAV12-1A0A0B4J245 112 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 TRAV12-3A0A0B4J271 114 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 TRBV10-1A0A0K0K1A3 114 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 MYMXA0A1B0GTQ4 84 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 CEBPZOSA8MTT3 80 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 TMEM14DPA8MWL7 114 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 D6R8Y8 96 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 H3BVH4 76 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 FXYD1O00168 92 aa0.82□□□□□ -2.28
NPHP3-207ENST00000476742 NUPR1O60356 82 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms