RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 GYPEP15421 78 aa6.31□□□□□ -1.4
SMC4-213ENST00000472282 RHOHQ15669 191 aa6.31□□□□□ -1.4
SMC4-213ENST00000472282 Q6ZSN1 163 aa6.31□□□□□ -1.4
SMC4-213ENST00000472282 SLC25A29Q8N8R3 303 aa6.31□□□□□ -1.4
SMC4-213ENST00000472282 PGLYRP4Q96LB8 373 aa6.31□□□□□ -1.4
SMC4-213ENST00000472282 AP1S3Q96PC3 154 aa6.31□□□□□ -1.4
SMC4-213ENST00000472282 MSRB1Q9NZV6 116 aa6.31□□□□□ -1.4
SMC4-213ENST00000472282 ICOSQ9Y6W8 199 aa6.31□□□□□ -1.4
SMC4-213ENST00000472282 TRBV6-4A0A1B0GX49 114 aa6.3□□□□□ -1.4
SMC4-213ENST00000472282 TMEM218A2RU14 115 aa6.3□□□□□ -1.4
SMC4-213ENST00000472282 HIGD1CA8MV81 97 aa6.3□□□□□ -1.4
SMC4-213ENST00000472282 F8W036 122 aa6.3□□□□□ -1.4
SMC4-213ENST00000472282 K7EQD1 137 aa6.3□□□□□ -1.4
SMC4-213ENST00000472282 PNRC1Q12796 327 aaPredicted RBP6.3□□□□□ -1.4
SMC4-213ENST00000472282 ZNF56Q15929 161 aa6.3□□□□□ -1.4
SMC4-213ENST00000472282 C14orf178Q8N769 122 aaPredicted RBP6.3□□□□□ -1.4
SMC4-213ENST00000472282 TSKUQ8WUA8 353 aa6.3□□□□□ -1.4
SMC4-213ENST00000472282 CNFNQ9BYD5 112 aa6.3□□□□□ -1.4
SMC4-213ENST00000472282 GFRA4Q9GZZ7 299 aa6.3□□□□□ -1.4
SMC4-213ENST00000472282 MGPP08493 103 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 TRGC1P0CF51 173 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 SMIM17P0DL12 118 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 NTF3P20783 257 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 SRIP30626 198 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 TWIST1Q15672 202 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 MRPL23Q16540 153 aaKnown RBP6.29□□□□□ -1.4
SMC4-213ENST00000472282 WDR73Q6P4I2 378 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 ZNRF2Q8NHG8 242 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 PRADC1Q9BSG0 188 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 LINC00588Q9Y4M8 146 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 KIF25-AS1Q9Y6Z4 181 aa6.29□□□□□ -1.4
SMC4-213ENST00000472282 PKHD1P08F94 4074 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 FAM231BA6NCW3 169 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 F5H697 171 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 EVI2AP22794 236 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 FOXA3P55318 350 aaPredicted RBP6.28□□□□□ -1.4
SMC4-213ENST00000472282 CCL18P55774 89 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 C1orf134Q5TEV5 83 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 NUP35Q8NFH5 326 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 BORCS7Q96B45 105 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 SEC11CQ9BY50 192 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 DPH3P1Q9H4G8 78 aa6.28□□□□□ -1.4
SMC4-213ENST00000472282 PCLOQ9Y6V0 5065 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 NBDYA0A0U1RRE5 68 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 A0A1B0GUT8 65 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 SMIM27A0A1W2PRY6 76 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 GAGE12JA6NER3 117 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 PPP1R2P9O14990 202 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 LINC00315P59091 139 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 RAB4BP61018 213 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 GAGE1Q13065 139 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 GAGE4Q13068 117 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 GAGE5Q13069 117 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 ESRGQ1W209 222 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 GAGE13Q4V321 117 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 NEGR1Q7Z3B1 354 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 ANAPC16Q96DE5 110 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 Q9UF83 564 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 NAT8BQ9UHF3 227 aa6.27□□□□□ -1.41
SMC4-213ENST00000472282 MT-ND4LP03901 98 aa6.26□□□□□ -1.41
SMC4-213ENST00000472282 LINC00694P0DN24 101 aa6.26□□□□□ -1.41
SMC4-213ENST00000472282 SMIM15Q7Z3B0 74 aa6.26□□□□□ -1.41
SMC4-213ENST00000472282 KRTAP1-5Q9BYS1 174 aa6.26□□□□□ -1.41
SMC4-213ENST00000472282 MRPS16Q9Y3D3 137 aaKnown RBP6.26□□□□□ -1.41
SMC4-213ENST00000472282 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
SMC4-213ENST00000472282 FAM3BP58499 235 aaPredicted RBP6.25□□□□□ -1.41
SMC4-213ENST00000472282 RIGQ13278 110 aa6.25□□□□□ -1.41
SMC4-213ENST00000472282 C10orf91Q5T1B1 145 aa6.25□□□□□ -1.41
SMC4-213ENST00000472282 SUMO4Q6EEV6 95 aa6.25□□□□□ -1.41
SMC4-213ENST00000472282 LYPD5Q6UWN5 251 aa6.25□□□□□ -1.41
SMC4-213ENST00000472282 SH2D6Q7Z4S9 175 aa6.25□□□□□ -1.41
SMC4-213ENST00000472282 NEXN-AS1Q8NBZ9 246 aa6.25□□□□□ -1.41
SMC4-213ENST00000472282 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
SMC4-213ENST00000472282 CARHSP1Q9Y2V2 147 aaKnown RBP6.25□□□□□ -1.41
SMC4-213ENST00000472282 M0QY20 66 aa6.24□□□□□ -1.41
SMC4-213ENST00000472282 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
SMC4-213ENST00000472282 MRPL54Q6P161 138 aaKnown RBP6.24□□□□□ -1.41
SMC4-213ENST00000472282 C6orf223Q8N319 242 aa6.24□□□□□ -1.41
SMC4-213ENST00000472282 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
SMC4-213ENST00000472282 TRBV7-3A0A075B6L6 115 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 TRAV26-2A0A0B4J265 109 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 H7C1H1 209 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 CAMPP49913 170 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 UBE2D3P61077 147 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 UBE2D2P62837 147 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 UPK3BQ9BT76 320 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 TMEM191AQ9H0A3 160 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 GTSF1LQ9H1H1 148 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 Q9H8V8 135 aa6.23□□□□□ -1.41
SMC4-213ENST00000472282 A0A1B0GXF2 115 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 APOC3P02656 99 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 TIRAPP58753 221 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 HBBP68871 147 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 RASL11AQ6T310 242 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 WFDC10BQ8IUB3 73 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 AMN1Q8IY45 258 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 SLC7A5P1Q8MH63 180 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 GATD1Q8NB37 220 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 CLRN3Q8NCR9 226 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 CTDSP1Q9GZU7 261 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms