RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ERCC8Q13216 396 aa9.44□□□□□ -0.9
HMGN1-211ENST00000471260 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
HMGN1-211ENST00000471260 COL5A1-AS1Q5SY13 56 aa9.44□□□□□ -0.9
HMGN1-211ENST00000471260 TMEM78Q5T7P6 136 aa9.44□□□□□ -0.9
HMGN1-211ENST00000471260 C18orf15Q96N68 181 aa9.44□□□□□ -0.9
HMGN1-211ENST00000471260 ST20Q9HBF5 79 aa9.44□□□□□ -0.9
HMGN1-211ENST00000471260 RBAKDNA6NC62 111 aa9.43□□□□□ -0.9
HMGN1-211ENST00000471260 C1orf134Q5TEV5 83 aa9.43□□□□□ -0.9
HMGN1-211ENST00000471260 PET117Q6UWS5 81 aa9.43□□□□□ -0.9
HMGN1-211ENST00000471260 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-211ENST00000471260 TMEM191AQ9H0A3 160 aa9.43□□□□□ -0.9
HMGN1-211ENST00000471260 FAT2Q9NYQ8 4349 aa9.43□□□□□ -0.9
HMGN1-211ENST00000471260 DNAH2Q9P225 4427 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 TRAV8-1A0A0A6YYK1 113 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 IGHV1-24A0A0C4DH33 117 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 GAGE12BA1L429 117 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 GAGE7O76087 117 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 LINC00614P0C842 121 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 GAGE12FP0CL80 117 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 GAGE12GP0CL81 117 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 GAGE12IP0CL82 117 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 FAM19A2Q8N3H0 131 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 URB1-AS1Q96HZ7 61 aa9.42□□□□□ -0.9
HMGN1-211ENST00000471260 TRAV26-1A0A087WT03 109 aa9.41□□□□□ -0.9
HMGN1-211ENST00000471260 RNASE4P34096 147 aaKnown RBP9.41□□□□□ -0.9
HMGN1-211ENST00000471260 TDRG1Q3Y452 100 aa9.41□□□□□ -0.9
HMGN1-211ENST00000471260 SPATA12Q7Z6I5 190 aa9.41□□□□□ -0.9
HMGN1-211ENST00000471260 ZFAND2AQ8N6M9 145 aa9.41□□□□□ -0.9
HMGN1-211ENST00000471260 C11orf72Q8NBR9 251 aa9.41□□□□□ -0.9
HMGN1-211ENST00000471260 VGLL1Q99990 258 aa9.41□□□□□ -0.9
HMGN1-211ENST00000471260 LINC00588Q9Y4M8 146 aa9.41□□□□□ -0.9
HMGN1-211ENST00000471260 IGKV2-40A0A087WW87 121 aaPredicted RBP9.4□□□□□ -0.9
HMGN1-211ENST00000471260 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 SYS1-DBNDD2H3BUS1 97 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 IGKV2D-40P01614 121 aaPredicted RBP9.4□□□□□ -0.9
HMGN1-211ENST00000471260 ZNF138P52744 262 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 Q6ZN92 141 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 SGK494Q96LW2 274 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 MAP1LC3CQ9BXW4 147 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 AP5S1Q9NUS5 200 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 LAMTOR2Q9Y2Q5 125 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 LENEPQ9Y5L5 61 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 DNAH17Q9UFH2 4485 aa9.4□□□□□ -0.9
HMGN1-211ENST00000471260 TRGV2A0A075B6R0 118 aa9.39□□□□□ -0.91
HMGN1-211ENST00000471260 HSBP1L1C9JCN9 74 aa9.39□□□□□ -0.91
HMGN1-211ENST00000471260 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
HMGN1-211ENST00000471260 MED14OSP0DP75 135 aa9.39□□□□□ -0.91
HMGN1-211ENST00000471260 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
HMGN1-211ENST00000471260 Q6ZTI0 123 aa9.39□□□□□ -0.91
HMGN1-211ENST00000471260 OR10AG1Q8NH19 301 aa9.39□□□□□ -0.91
HMGN1-211ENST00000471260 CNFNQ9BYD5 112 aa9.39□□□□□ -0.91
HMGN1-211ENST00000471260 IGHV1OR15-1A0A075B7D0 117 aa9.38□□□□□ -0.91
HMGN1-211ENST00000471260 SH2D1AO60880 128 aa9.38□□□□□ -0.91
HMGN1-211ENST00000471260 PMCHL2Q9BQD1 86 aa9.38□□□□□ -0.91
HMGN1-211ENST00000471260 UPK3BQ9BT76 320 aa9.38□□□□□ -0.91
HMGN1-211ENST00000471260 TRGV1A0A0A0MS02 117 aa9.37□□□□□ -0.91
HMGN1-211ENST00000471260 A0A0J9YY99 117 aa9.37□□□□□ -0.91
HMGN1-211ENST00000471260 DLEU1O43261 78 aa9.37□□□□□ -0.91
HMGN1-211ENST00000471260 PPBPP02775 128 aa9.37□□□□□ -0.91
HMGN1-211ENST00000471260 LINC01545Q5VT33 79 aa9.37□□□□□ -0.91
HMGN1-211ENST00000471260 FA2HQ7L5A8 372 aa9.37□□□□□ -0.91
HMGN1-211ENST00000471260 ORMDL3Q8N138 153 aa9.37□□□□□ -0.91
HMGN1-211ENST00000471260 C6orf223Q8N319 242 aa9.37□□□□□ -0.91
HMGN1-211ENST00000471260 Q9H8V8 135 aa9.37□□□□□ -0.91
HMGN1-211ENST00000471260 IGLC6P0CF74 106 aa9.36□□□□□ -0.91
HMGN1-211ENST00000471260 CRIP1P50238 77 aa9.36□□□□□ -0.91
HMGN1-211ENST00000471260 TTC32Q5I0X7 151 aa9.36□□□□□ -0.91
HMGN1-211ENST00000471260 PRR9Q5T870 116 aa9.36□□□□□ -0.91
HMGN1-211ENST00000471260 FAM104BQ5XKR9 115 aa9.36□□□□□ -0.91
HMGN1-211ENST00000471260 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
HMGN1-211ENST00000471260 ZNF415Q09FC8 603 aa9.35□□□□□ -0.91
HMGN1-211ENST00000471260 ESRGQ1W209 222 aa9.35□□□□□ -0.91
HMGN1-211ENST00000471260 FER1L6-AS1Q8NA97 138 aa9.35□□□□□ -0.91
HMGN1-211ENST00000471260 HERC2O95714 4834 aa9.35□□□□□ -0.91
HMGN1-211ENST00000471260 MUC4Q99102 2169 aa9.34□□□□□ -0.91
HMGN1-211ENST00000471260 ZNF25P17030 456 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-211ENST00000471260 Q8TAT8 98 aa9.34□□□□□ -0.91
HMGN1-211ENST00000471260 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
HMGN1-211ENST00000471260 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
HMGN1-211ENST00000471260 C8orf49Q96NF6 230 aa9.34□□□□□ -0.91
HMGN1-211ENST00000471260 A0A096LPF7 62 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 LINC01546A6NGU7 62 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 FABP5P3A8MUU1 101 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 SLC25A34Q6PIV7 304 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 LYZL1Q6UWQ5 148 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 FAM159AQ6UWV7 190 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 PRSS3P2Q8NHM4 247 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 PRELID3AQ96N28 172 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 SPXQ9BT56 116 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 PRO0255Q9UI72 69 aa9.33□□□□□ -0.92
HMGN1-211ENST00000471260 TRGV11A0A075B6L2 103 aa9.32□□□□□ -0.92
HMGN1-211ENST00000471260 PAX4O43316 350 aa9.32□□□□□ -0.92
HMGN1-211ENST00000471260 Q6ZQT7 251 aa9.32□□□□□ -0.92
HMGN1-211ENST00000471260 RASL10AQ92737 203 aa9.32□□□□□ -0.92
HMGN1-211ENST00000471260 ICOSQ9Y6W8 199 aa9.32□□□□□ -0.92
HMGN1-211ENST00000471260 HBDP02042 147 aa9.31□□□□□ -0.92
HMGN1-211ENST00000471260 TNP2Q05952 138 aa9.31□□□□□ -0.92
HMGN1-211ENST00000471260 ATOH7Q8N100 152 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms