RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 PEX7O00628 323 aa8.06□□□□□ -1.12
TRAPPC12-216ENST00000469400 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
TRAPPC12-216ENST00000469400 ZNF56Q15929 161 aa8.06□□□□□ -1.12
TRAPPC12-216ENST00000469400 LINC01559Q495D7 138 aa8.06□□□□□ -1.12
TRAPPC12-216ENST00000469400 WDR73Q6P4I2 378 aa8.06□□□□□ -1.12
TRAPPC12-216ENST00000469400 COX8CQ7Z4L0 72 aa8.06□□□□□ -1.12
TRAPPC12-216ENST00000469400 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
TRAPPC12-216ENST00000469400 MBP02144 154 aa8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 ATP6V0CP27449 155 aa8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 PRR3P79522 188 aaKnown RBP8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 REG3AQ06141 175 aa8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 TMEM97Q5BJF2 176 aa8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 GTSF1Q8WW33 167 aa8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 PSMG3Q9BT73 122 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 DERL1Q9BUN8 251 aa8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 ACTR3CQ9C0K3 210 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 VAX2Q9UIW0 290 aa8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 ZFP30Q9Y2G7 519 aa8.05□□□□□ -1.12
TRAPPC12-216ENST00000469400 TRBV25-1A0A075B6N4 114 aa8.04□□□□□ -1.12
TRAPPC12-216ENST00000469400 TRBV6-1A0A0K0K1D8 114 aa8.04□□□□□ -1.12
TRAPPC12-216ENST00000469400 UBE2G2P60604 165 aa8.04□□□□□ -1.12
TRAPPC12-216ENST00000469400 ZNF674Q2M3X9 581 aa8.04□□□□□ -1.12
TRAPPC12-216ENST00000469400 SSNA1O43805 119 aa8.03□□□□□ -1.12
TRAPPC12-216ENST00000469400 SERF2P84101 59 aa8.03□□□□□ -1.12
TRAPPC12-216ENST00000469400 AKAP14Q86UN6 197 aa8.03□□□□□ -1.12
TRAPPC12-216ENST00000469400 OR10AG1Q8NH19 301 aa8.03□□□□□ -1.12
TRAPPC12-216ENST00000469400 HIST1H2BAQ96A08 127 aa8.03□□□□□ -1.12
TRAPPC12-216ENST00000469400 MED28Q9H204 178 aa8.03□□□□□ -1.12
TRAPPC12-216ENST00000469400 TRAV8-4A0A0B4J246 113 aa8.02□□□□□ -1.13
TRAPPC12-216ENST00000469400 F5H697 171 aa8.02□□□□□ -1.13
TRAPPC12-216ENST00000469400 P01737 135 aa8.02□□□□□ -1.13
TRAPPC12-216ENST00000469400 RAB5CP51148 216 aa8.02□□□□□ -1.13
TRAPPC12-216ENST00000469400 COX6A2Q02221 97 aa8.02□□□□□ -1.13
TRAPPC12-216ENST00000469400 IQCJQ1A5X6 159 aa8.02□□□□□ -1.13
TRAPPC12-216ENST00000469400 C20orf203Q8NBC4 194 aa8.02□□□□□ -1.13
TRAPPC12-216ENST00000469400 TNFSF18Q9UNG2 199 aa8.02□□□□□ -1.13
TRAPPC12-216ENST00000469400 FAM74A7A6NL05 159 aa8.01□□□□□ -1.13
TRAPPC12-216ENST00000469400 MAJINQ3KP22 176 aa8.01□□□□□ -1.13
TRAPPC12-216ENST00000469400 REG3GQ6UW15 175 aa8.01□□□□□ -1.13
TRAPPC12-216ENST00000469400 SPINK6Q6UWN8 80 aa8.01□□□□□ -1.13
TRAPPC12-216ENST00000469400 TCTE3Q8IZS6 198 aa8.01□□□□□ -1.13
TRAPPC12-216ENST00000469400 FMC1Q96HJ9 113 aa8.01□□□□□ -1.13
TRAPPC12-216ENST00000469400 ZNF471Q9BX82 626 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC12-216ENST00000469400 NKX6-2Q9C056 277 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC12-216ENST00000469400 IGHV1-24A0A0C4DH33 117 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 IGKV2-24A0A0C4DH68 120 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 MUC21A0A0G2JKD1 596 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 LTAP01374 205 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 GZMBP10144 247 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 UBE2G1P62253 170 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 ZNF726P1Q15940 193 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 PRSS3P2Q8NHM4 247 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 LYPD6BQ8NI32 183 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 GFRA4Q9GZZ7 299 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 LPAP08519 4548 aa8□□□□□ -1.13
TRAPPC12-216ENST00000469400 IGLV4-60A0A075B6I1 120 aa7.99□□□□□ -1.13
TRAPPC12-216ENST00000469400 MUC21A0A140T8X8 626 aa7.99□□□□□ -1.13
TRAPPC12-216ENST00000469400 NDUFS6O75380 124 aaKnown RBP7.99□□□□□ -1.13
TRAPPC12-216ENST00000469400 STPG4Q8N801 248 aa7.99□□□□□ -1.13
TRAPPC12-216ENST00000469400 CTXND1A0A1B0GTU2 59 aa7.98□□□□□ -1.13
TRAPPC12-216ENST00000469400 A0A1B0GUV1 79 aa7.98□□□□□ -1.13
TRAPPC12-216ENST00000469400 RPS10P46783 165 aaKnown RBP7.98□□□□□ -1.13
TRAPPC12-216ENST00000469400 SPANXN1Q5VSR9 72 aa7.98□□□□□ -1.13
TRAPPC12-216ENST00000469400 C15orf56Q8N910 161 aa7.98□□□□□ -1.13
TRAPPC12-216ENST00000469400 SNAI2O43623 268 aa7.97□□□□□ -1.13
TRAPPC12-216ENST00000469400 GIPP09681 153 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC12-216ENST00000469400 SSTP61278 116 aa7.97□□□□□ -1.13
TRAPPC12-216ENST00000469400 SRSF9Q13242 221 aaKnown RBP eCLIP7.97□□□□□ -1.131e-7■□□□□ 8.8
TRAPPC12-216ENST00000469400 CFAP161Q6P656 301 aa7.97□□□□□ -1.13
TRAPPC12-216ENST00000469400 AQP10Q96PS8 301 aa7.97□□□□□ -1.13
TRAPPC12-216ENST00000469400 SSBP4Q9BWG4 385 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC12-216ENST00000469400 CXCL1P09341 107 aa7.96□□□□□ -1.14
TRAPPC12-216ENST00000469400 OR5AL1P0C617 328 aa7.96□□□□□ -1.14
TRAPPC12-216ENST00000469400 SMIM17P0DL12 118 aa7.96□□□□□ -1.14
TRAPPC12-216ENST00000469400 HIGD2BQ4VC39 106 aa7.96□□□□□ -1.14
TRAPPC12-216ENST00000469400 TMEM243Q9BU79 118 aa7.96□□□□□ -1.14
TRAPPC12-216ENST00000469400 GAGE12HA6NDE8 117 aa7.95□□□□□ -1.14
TRAPPC12-216ENST00000469400 M0QY20 66 aa7.95□□□□□ -1.14
TRAPPC12-216ENST00000469400 INO80EQ8NBZ0 244 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-216ENST00000469400 A0A096LNI7 61 aa7.94□□□□□ -1.14
TRAPPC12-216ENST00000469400 AKR1C3P42330 323 aa7.94□□□□□ -1.14
TRAPPC12-216ENST00000469400 SULT1A2P50226 295 aa7.94□□□□□ -1.14
TRAPPC12-216ENST00000469400 CST9LP1Q5W188 147 aa7.94□□□□□ -1.14
TRAPPC12-216ENST00000469400 RPL7L1Q6DKI1 246 aaKnown RBP7.94□□□□□ -1.14
TRAPPC12-216ENST00000469400 AP1S3Q96PC3 154 aa7.94□□□□□ -1.14
TRAPPC12-216ENST00000469400 TCEAL7Q9BRU2 100 aa7.94□□□□□ -1.14
TRAPPC12-216ENST00000469400 MUC2Q02817 5179 aa7.94□□□□□ -1.14
TRAPPC12-216ENST00000469400 FHITP49789 147 aa7.93□□□□□ -1.14
TRAPPC12-216ENST00000469400 Q6ZRP5 223 aa7.93□□□□□ -1.14
TRAPPC12-216ENST00000469400 H7C1H1 209 aa7.92□□□□□ -1.14
TRAPPC12-216ENST00000469400 MGPP08493 103 aa7.92□□□□□ -1.14
TRAPPC12-216ENST00000469400 NKX2-5P52952 324 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC12-216ENST00000469400 SUMO4Q6EEV6 95 aa7.92□□□□□ -1.14
TRAPPC12-216ENST00000469400 STOML3Q8TAV4 291 aa7.92□□□□□ -1.14
TRAPPC12-216ENST00000469400 KRTAP9-2Q9BYQ4 174 aa7.92□□□□□ -1.14
TRAPPC12-216ENST00000469400 LINC00474Q9P2X8 69 aa7.92□□□□□ -1.14
TRAPPC12-216ENST00000469400 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC12-216ENST00000469400 IGKV3OR2-268A0A0C4DH90 116 aa7.91□□□□□ -1.14
TRAPPC12-216ENST00000469400 MAP1LC3B2A6NCE7 125 aa7.91□□□□□ -1.14
TRAPPC12-216ENST00000469400 G3V3Q6 166 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 307.5 ms