RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 ODF3Q96PU9 254 aa10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 SPAG8Q99932 426 aaPredicted RBP10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 TEX15Q9BXT5 2789 aa10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 IGHV3-16A0A0C4DH30 117 aa10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 J3QR89 54 aa10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 ZNF876PQ49A33 203 aa10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 Q8N2B8 174 aa10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 DEFB104AQ8WTQ1 72 aa10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 MRPL16Q9NX20 251 aaKnown RBP10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 TSSC4Q9Y5U2 329 aaPredicted RBP10.92□□□□□ -0.66
PRPF38B-204ENST00000467302 F5H697 171 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 MTURNQ8N3F0 131 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 RNF152Q8N8N0 203 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 ZNRF2Q8NHG8 242 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 DUX5Q96PT3 197 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 MXRA5Q9NR99 2828 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 ITPR3Q14573 2671 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 GAGE12HA6NDE8 117 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 TSPAN13O95857 204 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 TSPEAR-AS2P59090 65 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
PRPF38B-204ENST00000467302 M0QY20 66 aa10.9□□□□□ -0.66
PRPF38B-204ENST00000467302 UBE2E2Q96LR5 201 aa10.9□□□□□ -0.66
PRPF38B-204ENST00000467302 AMELXQ99217 191 aa10.9□□□□□ -0.66
PRPF38B-204ENST00000467302 SIGMAR1Q99720 223 aa10.9□□□□□ -0.66
PRPF38B-204ENST00000467302 MDFICQ9P1T7 246 aa10.9□□□□□ -0.66
PRPF38B-204ENST00000467302 A0A0J9YX75 114 aa10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 AZU1P20160 251 aa10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 UBE2D3P61077 147 aa10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 UBE2D2P62837 147 aa10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 GTSF1LQ9H1H1 148 aa10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 ZNF688P0C7X2 276 aa10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 CFAP126Q5VTH2 177 aa10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 NDUFA11Q86Y39 141 aa10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 SLC25A29Q8N8R3 303 aa10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 DLX4Q92988 240 aaPredicted RBP10.89□□□□□ -0.67
PRPF38B-204ENST00000467302 IGHV3-30P01768 117 aa10.88□□□□□ -0.67
PRPF38B-204ENST00000467302 IGHV3-30-5P0DP03 117 aa10.88□□□□□ -0.67
PRPF38B-204ENST00000467302 SCGB1A1P11684 91 aa10.88□□□□□ -0.67
PRPF38B-204ENST00000467302 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-204ENST00000467302 INSL3P51460 131 aa10.88□□□□□ -0.67
PRPF38B-204ENST00000467302 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
PRPF38B-204ENST00000467302 FAM74A4Q5TZK3 123 aa10.88□□□□□ -0.67
PRPF38B-204ENST00000467302 Q8N1Y9 231 aa10.88□□□□□ -0.67
PRPF38B-204ENST00000467302 TRAV12-2A0A075B6T6 113 aa10.87□□□□□ -0.67
PRPF38B-204ENST00000467302 RHOHQ15669 191 aa10.87□□□□□ -0.67
PRPF38B-204ENST00000467302 TMEM170BQ5T4T1 132 aa10.87□□□□□ -0.67
PRPF38B-204ENST00000467302 NFE4Q86UQ8 179 aa10.87□□□□□ -0.67
PRPF38B-204ENST00000467302 ZNF469Q96JG9 3925 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-204ENST00000467302 K7EQG2 157 aa10.87□□□□□ -0.67
PRPF38B-204ENST00000467302 SYT8Q8NBV8 401 aa10.87□□□□□ -0.67
PRPF38B-204ENST00000467302 SYNJ2BPP57105 145 aa10.86□□□□□ -0.67
PRPF38B-204ENST00000467302 SNRPD3P62318 126 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-204ENST00000467302 ZNF256Q9Y2P7 627 aaPredicted RBP10.86□□□□□ -0.67
PRPF38B-204ENST00000467302 HELZ2Q9BYK8 2649 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-204ENST00000467302 IGHV1OR15-1A0A075B7D0 117 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 J3QQQ9 107 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 APOMO95445 188 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 CFC1BP0CG36 223 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 CFC1P0CG37 223 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 P0DMU3 169 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 FAM231AP0DMU4 169 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 FAM231CP0DMU5 169 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 KRTAP1-1Q07627 177 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 ZNF56Q15929 161 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 ATP6V0E2Q8NHE4 81 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 IGKV3-20P01619 116 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 HOXD3P31249 432 aaPredicted RBP10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 TRPT1Q86TN4 253 aaKnown RBP10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 OPRPNQ99935 248 aaPredicted RBP10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 C1QTNF4Q9BXJ3 329 aa10.85□□□□□ -0.67
PRPF38B-204ENST00000467302 LOC107984156A0A0G2JMH3 177 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 DNAJC9-AS1A6NH13 148 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 PSMB2P49721 201 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 SMAGPQ0VAQ4 97 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 ARL17AQ8IVW1 177 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 PDZD2O15018 2839 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 TMEM223A0PJW6 202 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 FOXI1Q12951 378 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 SPINK13Q1W4C9 94 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
PRPF38B-204ENST00000467302 C20orf203Q8NBC4 194 aa10.83□□□□□ -0.68
PRPF38B-204ENST00000467302 FLNAP21333 2647 aaKnown RBP10.83□□□□□ -0.68
PRPF38B-204ENST00000467302 CCDC168Q8NDH2 2452 aa10.83□□□□□ -0.68
PRPF38B-204ENST00000467302 LEPROTO15243 131 aa10.82□□□□□ -0.68
PRPF38B-204ENST00000467302 LGALS3P17931 250 aaKnown RBP10.82□□□□□ -0.68
PRPF38B-204ENST00000467302 LYRM7Q5U5X0 104 aa10.82□□□□□ -0.68
PRPF38B-204ENST00000467302 C10orf126Q8N4M7 172 aa10.82□□□□□ -0.68
PRPF38B-204ENST00000467302 YAE1D1Q9NRH1 226 aa10.82□□□□□ -0.68
PRPF38B-204ENST00000467302 I3L3M4 83 aa10.81□□□□□ -0.68
PRPF38B-204ENST00000467302 TCL1BO95988 128 aa10.81□□□□□ -0.68
PRPF38B-204ENST00000467302 Q6ZSV7 163 aa10.81□□□□□ -0.68
PRPF38B-204ENST00000467302 C18orf65Q6ZTR6 163 aa10.81□□□□□ -0.68
PRPF38B-204ENST00000467302 C4orf3Q8WVX3 66 aa10.81□□□□□ -0.68
PRPF38B-204ENST00000467302 TLN2Q9Y4G6 2542 aa10.81□□□□□ -0.68
PRPF38B-204ENST00000467302 TRBV20-1A0A075B6N2 111 aa10.8□□□□□ -0.68
PRPF38B-204ENST00000467302 ZNF22P17026 224 aaPredicted RBP10.8□□□□□ -0.68
PRPF38B-204ENST00000467302 SBSPONQ8IVN8 264 aa10.8□□□□□ -0.68
PRPF38B-204ENST00000467302 PRO1854Q9UHT4 67 aa10.8□□□□□ -0.68
PRPF38B-204ENST00000467302 AKAP9Q99996 3911 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms