RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TMEM191AQ9H0A3 160 aa11.67□□□□□ -0.54
VPS52-215ENST00000464425 TRBV10-1A0A0K0K1A3 114 aa11.66□□□□□ -0.54
VPS52-215ENST00000464425 PRSS29PA6NIE9 313 aa11.66□□□□□ -0.54
VPS52-215ENST00000464425 F5H697 171 aa11.66□□□□□ -0.54
VPS52-215ENST00000464425 SIVA1O15304 175 aa11.66□□□□□ -0.54
VPS52-215ENST00000464425 SH2D6Q7Z4S9 175 aa11.66□□□□□ -0.54
VPS52-215ENST00000464425 ATP5L2Q7Z4Y8 100 aa11.66□□□□□ -0.54
VPS52-215ENST00000464425 KRTAP1-5Q9BYS1 174 aa11.66□□□□□ -0.54
VPS52-215ENST00000464425 DNAH17Q9UFH2 4485 aa11.66□□□□□ -0.54
VPS52-215ENST00000464425 S100A8P05109 93 aa11.65□□□□□ -0.54
VPS52-215ENST00000464425 TTC32Q5I0X7 151 aa11.65□□□□□ -0.54
VPS52-215ENST00000464425 FRZBQ92765 325 aa11.65□□□□□ -0.54
VPS52-215ENST00000464425 BTF3L4Q96K17 158 aa11.65□□□□□ -0.54
VPS52-215ENST00000464425 RPS10P5Q9NQ39 176 aa11.65□□□□□ -0.54
VPS52-215ENST00000464425 Q9UF83 564 aa11.65□□□□□ -0.54
VPS52-215ENST00000464425 TRAV9-1A0A075B6T8 112 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 A0A1B0GXF2 115 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 GAGE12JA6NER3 117 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 MGPP08493 103 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 GAGE1Q13065 139 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 GAGE4Q13068 117 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 GAGE5Q13069 117 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 GAGE13Q4V321 117 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 KCNIP4Q6PIL6 250 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
VPS52-215ENST00000464425 H7C1H1 209 aa11.63□□□□□ -0.55
VPS52-215ENST00000464425 M0QY20 66 aa11.63□□□□□ -0.55
VPS52-215ENST00000464425 HBBP68871 147 aa11.63□□□□□ -0.55
VPS52-215ENST00000464425 WFDC10BQ8IUB3 73 aa11.63□□□□□ -0.55
VPS52-215ENST00000464425 BIRC6Q9NR09 4857 aa11.62□□□□□ -0.55
VPS52-215ENST00000464425 LINC00694P0DN24 101 aa11.62□□□□□ -0.55
VPS52-215ENST00000464425 S100PP25815 95 aa11.62□□□□□ -0.55
VPS52-215ENST00000464425 CAMPP49913 170 aa11.62□□□□□ -0.55
VPS52-215ENST00000464425 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
VPS52-215ENST00000464425 MRPL54Q6P161 138 aaKnown RBP11.62□□□□□ -0.55
VPS52-215ENST00000464425 GATD1Q8NB37 220 aa11.62□□□□□ -0.55
VPS52-215ENST00000464425 ATP6V0E2Q8NHE4 81 aa11.62□□□□□ -0.55
VPS52-215ENST00000464425 TRBV7-3A0A075B6L6 115 aa11.61□□□□□ -0.55
VPS52-215ENST00000464425 RAB4AP20338 218 aa11.61□□□□□ -0.55
VPS52-215ENST00000464425 TIRAPP58753 221 aa11.61□□□□□ -0.55
VPS52-215ENST00000464425 RPL36AP83881 106 aaKnown RBP11.61□□□□□ -0.55
VPS52-215ENST00000464425 RASL11AQ6T310 242 aa11.61□□□□□ -0.55
VPS52-215ENST00000464425 RPL36ALQ969Q0 106 aaKnown RBP11.61□□□□□ -0.55
VPS52-215ENST00000464425 DNAJC30Q96LL9 226 aa11.61□□□□□ -0.55
VPS52-215ENST00000464425 FAM104BQ5XKR9 115 aa11.6□□□□□ -0.55
VPS52-215ENST00000464425 RNF185Q96GF1 192 aa11.6□□□□□ -0.55
VPS52-215ENST00000464425 GTSF1LQ9H1H1 148 aa11.6□□□□□ -0.55
VPS52-215ENST00000464425 OR10J3Q5JRS4 329 aa11.59□□□□□ -0.55
VPS52-215ENST00000464425 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
VPS52-215ENST00000464425 NEXN-AS1Q8NBZ9 246 aa11.59□□□□□ -0.55
VPS52-215ENST00000464425 MRAP2Q96G30 205 aa11.59□□□□□ -0.55
VPS52-215ENST00000464425 NIT2Q9NQR4 276 aa11.59□□□□□ -0.55
VPS52-215ENST00000464425 TRAV8-6A0A0B4J262 113 aa11.58□□□□□ -0.56
VPS52-215ENST00000464425 A0A1B0GVY2 172 aa11.58□□□□□ -0.56
VPS52-215ENST00000464425 UBE2D3P61077 147 aa11.58□□□□□ -0.56
VPS52-215ENST00000464425 UBE2D2P62837 147 aa11.58□□□□□ -0.56
VPS52-215ENST00000464425 TNP2Q05952 138 aa11.58□□□□□ -0.56
VPS52-215ENST00000464425 TNFRSF18Q9Y5U5 241 aa11.58□□□□□ -0.56
VPS52-215ENST00000464425 TRAV9-2A0A087WT02 112 aa11.57□□□□□ -0.56
VPS52-215ENST00000464425 DNAH10OSP0CZ25 163 aa11.57□□□□□ -0.56
VPS52-215ENST00000464425 LELP1Q5T871 98 aa11.57□□□□□ -0.56
VPS52-215ENST00000464425 URGCP-MRPS24S4R325 110 aa11.57□□□□□ -0.56
VPS52-215ENST00000464425 HECTD4Q9Y4D8 3996 aa11.57□□□□□ -0.56
VPS52-215ENST00000464425 TRAV26-2A0A0B4J265 109 aa11.56□□□□□ -0.56
VPS52-215ENST00000464425 IGHV3-38A0A0C4DH36 116 aa11.56□□□□□ -0.56
VPS52-215ENST00000464425 ATRAIDQ6UW56 229 aa11.56□□□□□ -0.56
VPS52-215ENST00000464425 PPP1R17O96001 155 aa11.55□□□□□ -0.56
VPS52-215ENST00000464425 MRPL51Q4U2R6 128 aaKnown RBP11.55□□□□□ -0.56
VPS52-215ENST00000464425 DAZ4Q86SG3 579 aaKnown RBP11.55□□□□□ -0.56
VPS52-215ENST00000464425 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.55□□□□□ -0.56
VPS52-215ENST00000464425 DAZ3Q9NR90 486 aaKnown RBP11.55□□□□□ -0.56
VPS52-215ENST00000464425 TRBV6-5A0A0K0K1A5 114 aa11.54□□□□□ -0.56
VPS52-215ENST00000464425 COX19Q49B96 90 aa11.54□□□□□ -0.56
VPS52-215ENST00000464425 PKD1P98161 4303 aa11.54□□□□□ -0.56
VPS52-215ENST00000464425 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
VPS52-215ENST00000464425 IGHV3-33P01772 117 aa11.53□□□□□ -0.56
VPS52-215ENST00000464425 PPBPP02775 128 aa11.53□□□□□ -0.56
VPS52-215ENST00000464425 IGHV3-30-3P0DP02 117 aa11.53□□□□□ -0.56
VPS52-215ENST00000464425 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
VPS52-215ENST00000464425 BTF3P20290 206 aaKnown RBP11.53□□□□□ -0.56
VPS52-215ENST00000464425 ELOBQ15370 118 aa11.53□□□□□ -0.56
VPS52-215ENST00000464425 RPL39LQ96EH5 51 aaKnown RBP11.53□□□□□ -0.56
VPS52-215ENST00000464425 TRBV24-1A0A075B6N3 115 aa11.52□□□□□ -0.57
VPS52-215ENST00000464425 CKS2P33552 79 aa11.52□□□□□ -0.57
VPS52-215ENST00000464425 TMEM97Q5BJF2 176 aa11.52□□□□□ -0.57
VPS52-215ENST00000464425 LINC01556Q5JQF7 62 aa11.52□□□□□ -0.57
VPS52-215ENST00000464425 TMEM136Q6ZRR5 245 aa11.52□□□□□ -0.57
VPS52-215ENST00000464425 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.57
VPS52-215ENST00000464425 SMCO4Q9NRQ5 59 aa11.52□□□□□ -0.57
VPS52-215ENST00000464425 K7EP13 123 aa11.51□□□□□ -0.57
VPS52-215ENST00000464425 GAS8-AS1O95177 125 aa11.51□□□□□ -0.57
VPS52-215ENST00000464425 Q8N3U1 123 aa11.51□□□□□ -0.57
VPS52-215ENST00000464425 YPEL4Q96NS1 127 aa11.51□□□□□ -0.57
VPS52-215ENST00000464425 PKHD1P08F94 4074 aa11.51□□□□□ -0.57
VPS52-215ENST00000464425 HLA-DQA1P01909 254 aa11.5□□□□□ -0.57
VPS52-215ENST00000464425 RPS10P46783 165 aaKnown RBP11.5□□□□□ -0.57
VPS52-215ENST00000464425 Q6ZRN7 208 aaPredicted RBP11.5□□□□□ -0.57
VPS52-215ENST00000464425 C10orf126Q8N4M7 172 aa11.5□□□□□ -0.57
VPS52-215ENST00000464425 NRACQ8N912 160 aa11.5□□□□□ -0.57
VPS52-215ENST00000464425 ST20Q9HBF5 79 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms