RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 TRAV26-2A0A0B4J265 109 aa13.23□□□□□ -0.29
ATPAF2-202ENST00000462733 C7orf71A4D174 169 aa13.23□□□□□ -0.29
ATPAF2-202ENST00000462733 KLLNB2CW77 178 aa13.23□□□□□ -0.29
ATPAF2-202ENST00000462733 PLNP26678 52 aa13.23□□□□□ -0.29
ATPAF2-202ENST00000462733 NMUP48645 174 aa13.23□□□□□ -0.29
ATPAF2-202ENST00000462733 KPRPQ5T749 579 aaPredicted RBP13.23□□□□□ -0.29
ATPAF2-202ENST00000462733 FOXI2Q6ZQN5 318 aa13.23□□□□□ -0.29
ATPAF2-202ENST00000462733 H3BRM9 83 aa13.22□□□□□ -0.29
ATPAF2-202ENST00000462733 RNASE4P34096 147 aaKnown RBP13.22□□□□□ -0.29
ATPAF2-202ENST00000462733 SUMO2P61956 95 aaKnown RBP13.22□□□□□ -0.29
ATPAF2-202ENST00000462733 A0A087WX48 190 aa13.22□□□□□ -0.29
ATPAF2-202ENST00000462733 A0A0J9YX75 114 aa13.22□□□□□ -0.29
ATPAF2-202ENST00000462733 IGKV3-20P01619 116 aa13.22□□□□□ -0.29
ATPAF2-202ENST00000462733 RPL32P62910 135 aaKnown RBP13.22□□□□□ -0.29
ATPAF2-202ENST00000462733 CBY3A6NI87 242 aa13.21□□□□□ -0.3
ATPAF2-202ENST00000462733 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.21□□□□□ -0.3
ATPAF2-202ENST00000462733 PCP2Q8IVA1 136 aa13.21□□□□□ -0.3
ATPAF2-202ENST00000462733 LINC01549A6NIU2 74 aa13.2□□□□□ -0.3
ATPAF2-202ENST00000462733 STHQ8IWL8 128 aa13.2□□□□□ -0.3
ATPAF2-202ENST00000462733 RASL10AQ92737 203 aa13.2□□□□□ -0.3
ATPAF2-202ENST00000462733 H3BMM0 161 aa13.19□□□□□ -0.3
ATPAF2-202ENST00000462733 J3KRW8 73 aa13.19□□□□□ -0.3
ATPAF2-202ENST00000462733 TOMM6Q96B49 74 aa13.19□□□□□ -0.3
ATPAF2-202ENST00000462733 RNASE3P12724 160 aaKnown RBP13.19□□□□□ -0.3
ATPAF2-202ENST00000462733 C9orf118A6NHY6 69 aa13.18□□□□□ -0.3
ATPAF2-202ENST00000462733 DUSP14O95147 198 aaKnown RBP13.18□□□□□ -0.3
ATPAF2-202ENST00000462733 RPL35AP18077 110 aaKnown RBP13.18□□□□□ -0.3
ATPAF2-202ENST00000462733 H7C1H1 209 aa13.17□□□□□ -0.3
ATPAF2-202ENST00000462733 IGHV4-30-4P0DP06 118 aa13.17□□□□□ -0.3
ATPAF2-202ENST00000462733 ZC2HC1BQ5TFG8 222 aa13.17□□□□□ -0.3
ATPAF2-202ENST00000462733 AMMECR1LQ6DCA0 310 aa13.17□□□□□ -0.3
ATPAF2-202ENST00000462733 C14orf178Q8N769 122 aaPredicted RBP13.17□□□□□ -0.3
ATPAF2-202ENST00000462733 MRPL35Q9NZE8 188 aaKnown RBP13.17□□□□□ -0.3
ATPAF2-202ENST00000462733 IGKV2D-26A0A0A0MRZ7 120 aa13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 F8VRH5 84 aa13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 FAM159AQ6UWV7 190 aa13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 TRAV8-6A0A0B4J262 113 aa13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 RBMY1BA6NDE4 496 aaKnown RBP13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 RBMY1EA6NEQ0 496 aaKnown RBP13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 RBMY1DP0C7P1 496 aaKnown RBP13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 TRPT1Q86TN4 253 aaKnown RBP13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 SCGB3A1Q96QR1 104 aa13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 KIF25-AS1Q9Y6Z4 181 aa13.16□□□□□ -0.3
ATPAF2-202ENST00000462733 GNRH2O43555 120 aa13.15□□□□□ -0.3
ATPAF2-202ENST00000462733 MGPP08493 103 aa13.15□□□□□ -0.3
ATPAF2-202ENST00000462733 TAL2Q16559 108 aa13.15□□□□□ -0.3
ATPAF2-202ENST00000462733 GTF2H5Q6ZYL4 71 aa13.15□□□□□ -0.3
ATPAF2-202ENST00000462733 CHAC1Q9BUX1 264 aa13.15□□□□□ -0.3
ATPAF2-202ENST00000462733 K7EIL1 84 aa13.14□□□□□ -0.31
ATPAF2-202ENST00000462733 CDKN1BP46527 198 aa13.13□□□□□ -0.31
ATPAF2-202ENST00000462733 TCTAP57738 103 aa13.13□□□□□ -0.31
ATPAF2-202ENST00000462733 LINC00315P59091 139 aa13.13□□□□□ -0.31
ATPAF2-202ENST00000462733 AMTNQ6UX39 209 aa13.13□□□□□ -0.31
ATPAF2-202ENST00000462733 NEXN-AS1Q8NBZ9 246 aa13.13□□□□□ -0.31
ATPAF2-202ENST00000462733 RPL39LQ96EH5 51 aaKnown RBP13.13□□□□□ -0.31
ATPAF2-202ENST00000462733 TRBV25-1A0A075B6N4 114 aa13.12□□□□□ -0.31
ATPAF2-202ENST00000462733 A8MTW9 85 aa13.12□□□□□ -0.31
ATPAF2-202ENST00000462733 SPINK13Q1W4C9 94 aa13.12□□□□□ -0.31
ATPAF2-202ENST00000462733 DEFB121Q5J5C9 76 aa13.12□□□□□ -0.31
ATPAF2-202ENST00000462733 ERASQ7Z444 233 aa13.12□□□□□ -0.31
ATPAF2-202ENST00000462733 CHTOPQ9Y3Y2 248 aaKnown RBP13.12□□□□□ -0.31
ATPAF2-202ENST00000462733 C2orf66Q6UXQ4 117 aa13.11□□□□□ -0.31
ATPAF2-202ENST00000462733 C9orf85Q96MD7 179 aa13.11□□□□□ -0.31
ATPAF2-202ENST00000462733 TM2D2Q9BX73 214 aa13.11□□□□□ -0.31
ATPAF2-202ENST00000462733 GAGE10A6NGK3 116 aa13.1□□□□□ -0.31
ATPAF2-202ENST00000462733 UFSP1Q6NVU6 142 aa13.1□□□□□ -0.31
ATPAF2-202ENST00000462733 SYT8Q8NBV8 401 aa13.1□□□□□ -0.31
ATPAF2-202ENST00000462733 CLUHP3Q96NS8 147 aa13.1□□□□□ -0.31
ATPAF2-202ENST00000462733 CSTL1Q9H114 145 aa13.1□□□□□ -0.31
ATPAF2-202ENST00000462733 TRAV12-2A0A075B6T6 113 aa13.1□□□□□ -0.31
ATPAF2-202ENST00000462733 TRBV6-5A0A0K0K1A5 114 aa13.1□□□□□ -0.31
ATPAF2-202ENST00000462733 SMIM13P0DJ93 91 aa13.1□□□□□ -0.31
ATPAF2-202ENST00000462733 RNASE8Q8TDE3 154 aaKnown RBP13.1□□□□□ -0.31
ATPAF2-202ENST00000462733 A8MZ25 164 aa13.09□□□□□ -0.31
ATPAF2-202ENST00000462733 K7EP34 96 aa13.09□□□□□ -0.31
ATPAF2-202ENST00000462733 RBX1P62877 108 aa13.09□□□□□ -0.31
ATPAF2-202ENST00000462733 XCL2Q9UBD3 114 aa13.09□□□□□ -0.31
ATPAF2-202ENST00000462733 CYSLTR1Q9Y271 337 aa13.09□□□□□ -0.31
ATPAF2-202ENST00000462733 IGHV3-16A0A0C4DH30 117 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 OR5A1Q8NGJ0 315 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 BAALCQ8WXS3 180 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 TRAV12-3A0A0B4J271 114 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 H3BUT2 72 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 VCYO14598 125 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 GCSHP23434 173 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 PCP4P48539 62 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 POLR2KP53803 58 aaKnown RBP13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 PAPPA-AS1Q5QFB9 102 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 SUMO4Q6EEV6 95 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 MORN3Q6PF18 240 aaPredicted RBP13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 CEND1Q8N111 149 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 MRAPQ8TCY5 172 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 CST9LQ9H4G1 147 aa13.08□□□□□ -0.32
ATPAF2-202ENST00000462733 A0A1W2PPM0 123 aa13.07□□□□□ -0.32
ATPAF2-202ENST00000462733 SPRY2O43597 315 aa13.07□□□□□ -0.32
ATPAF2-202ENST00000462733 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
ATPAF2-202ENST00000462733 APOC4P55056 127 aa13.07□□□□□ -0.32
ATPAF2-202ENST00000462733 OR11H2Q8NH07 326 aa13.07□□□□□ -0.32
ATPAF2-202ENST00000462733 TMEM141Q96I45 108 aa13.07□□□□□ -0.32
ATPAF2-202ENST00000462733 KIR2DL4Q99706 377 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms