RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 CITED1Q99966 193 aa10.64□□□□□ -0.71
HDAC6-213ENST00000462730 NXT2Q9NPJ8 142 aaKnown RBP10.64□□□□□ -0.71
HDAC6-213ENST00000462730 HIGD1BQ9P298 99 aa10.64□□□□□ -0.71
HDAC6-213ENST00000462730 MUC4Q99102 2169 aa10.63□□□□□ -0.71
HDAC6-213ENST00000462730 OR11H12B2RN74 326 aa10.63□□□□□ -0.71
HDAC6-213ENST00000462730 IGLV1-51P01701 117 aa10.63□□□□□ -0.71
HDAC6-213ENST00000462730 TENM1Q9UKZ4 2725 aa10.62□□□□□ -0.71
HDAC6-213ENST00000462730 TEP1Q99973 2627 aaKnown RBP10.62□□□□□ -0.71
HDAC6-213ENST00000462730 LINC01546A6NGU7 62 aa10.62□□□□□ -0.71
HDAC6-213ENST00000462730 NMUP48645 174 aa10.62□□□□□ -0.71
HDAC6-213ENST00000462730 PCP2Q8IVA1 136 aa10.62□□□□□ -0.71
HDAC6-213ENST00000462730 Q8N8P6 123 aa10.62□□□□□ -0.71
HDAC6-213ENST00000462730 SYT8Q8NBV8 401 aa10.62□□□□□ -0.71
HDAC6-213ENST00000462730 JPT2Q9H910 190 aa10.62□□□□□ -0.71
HDAC6-213ENST00000462730 DKK2Q9UBU2 259 aa10.62□□□□□ -0.71
HDAC6-213ENST00000462730 FABP2P12104 132 aa10.61□□□□□ -0.71
HDAC6-213ENST00000462730 STHQ8IWL8 128 aa10.61□□□□□ -0.71
HDAC6-213ENST00000462730 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
HDAC6-213ENST00000462730 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
HDAC6-213ENST00000462730 HTN1P15515 57 aa10.61□□□□□ -0.71
HDAC6-213ENST00000462730 RIPPLY3P57055 190 aa10.61□□□□□ -0.71
HDAC6-213ENST00000462730 RASL10AQ92737 203 aa10.61□□□□□ -0.71
HDAC6-213ENST00000462730 C18orf15Q96N68 181 aa10.61□□□□□ -0.71
HDAC6-213ENST00000462730 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
HDAC6-213ENST00000462730 A0A087WWL8 130 aa10.6□□□□□ -0.71
HDAC6-213ENST00000462730 INSP01308 110 aa10.6□□□□□ -0.71
HDAC6-213ENST00000462730 POM121L12Q8N7R1 296 aa10.6□□□□□ -0.71
HDAC6-213ENST00000462730 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
HDAC6-213ENST00000462730 H3BUT2 72 aa10.59□□□□□ -0.71
HDAC6-213ENST00000462730 J3QR89 54 aa10.59□□□□□ -0.71
HDAC6-213ENST00000462730 LINC00315P59091 139 aa10.59□□□□□ -0.71
HDAC6-213ENST00000462730 KRTAP24-1Q3LI83 254 aa10.59□□□□□ -0.71
HDAC6-213ENST00000462730 ATRQ13535 2644 aa10.59□□□□□ -0.71
HDAC6-213ENST00000462730 FCER1GP30273 86 aa10.59□□□□□ -0.71
HDAC6-213ENST00000462730 CMC4P56277 68 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-213ENST00000462730 TRPT1Q86TN4 253 aaKnown RBP10.59□□□□□ -0.71
HDAC6-213ENST00000462730 SPCS1Q9Y6A9 102 aa10.59□□□□□ -0.71
HDAC6-213ENST00000462730 SMIM13P0DJ93 91 aa10.58□□□□□ -0.72
HDAC6-213ENST00000462730 ODF1Q14990 250 aa10.58□□□□□ -0.72
HDAC6-213ENST00000462730 SPATA3Q8NHX4 192 aa10.58□□□□□ -0.72
HDAC6-213ENST00000462730 LINC01587Q99440 93 aa10.58□□□□□ -0.72
HDAC6-213ENST00000462730 SMIM2Q9BVW6 85 aa10.58□□□□□ -0.72
HDAC6-213ENST00000462730 ZMAT4Q9H898 229 aa10.58□□□□□ -0.72
HDAC6-213ENST00000462730 PRM2P04554 102 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 NAA38Q9BRA0 125 aaKnown RBP10.57□□□□□ -0.72
HDAC6-213ENST00000462730 XCL2Q9UBD3 114 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 F5H697 171 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 SUMO2P61956 95 aaKnown RBP10.57□□□□□ -0.72
HDAC6-213ENST00000462730 TAL2Q16559 108 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 ZNF876PQ49A33 203 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 FAM74A4Q5TZK3 123 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 SUMO4Q6EEV6 95 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 TMEM158Q8WZ71 300 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 C20orf78Q9BR46 151 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 HHLA3Q9XRX5 114 aa10.57□□□□□ -0.72
HDAC6-213ENST00000462730 PPP1R17O96001 155 aa10.56□□□□□ -0.72
HDAC6-213ENST00000462730 ZNF415Q09FC8 603 aa10.56□□□□□ -0.72
HDAC6-213ENST00000462730 LAGE3Q14657 143 aa10.56□□□□□ -0.72
HDAC6-213ENST00000462730 BEAN1Q3B7T3 259 aa10.56□□□□□ -0.72
HDAC6-213ENST00000462730 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
HDAC6-213ENST00000462730 LINC00467Q9BRT7 94 aa10.56□□□□□ -0.72
HDAC6-213ENST00000462730 IGKV2D-26A0A0A0MRZ7 120 aa10.56□□□□□ -0.72
HDAC6-213ENST00000462730 PRSS1P07477 247 aa10.56□□□□□ -0.72
HDAC6-213ENST00000462730 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
HDAC6-213ENST00000462730 VWFP04275 2813 aa10.55□□□□□ -0.72
HDAC6-213ENST00000462730 IGKCP01834 107 aa10.55□□□□□ -0.72
HDAC6-213ENST00000462730 CRYGDP07320 174 aa10.55□□□□□ -0.72
HDAC6-213ENST00000462730 ZNF56Q15929 161 aa10.55□□□□□ -0.72
HDAC6-213ENST00000462730 TRRAPQ9Y4A5 3859 aa10.54□□□□□ -0.72
HDAC6-213ENST00000462730 ATP5LO75964 103 aa10.54□□□□□ -0.72
HDAC6-213ENST00000462730 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
HDAC6-213ENST00000462730 PRIMA1Q86XR5 153 aa10.54□□□□□ -0.72
HDAC6-213ENST00000462730 FAM110AQ9BQ89 295 aa10.54□□□□□ -0.72
HDAC6-213ENST00000462730 C19orf73Q9NVV2 129 aa10.54□□□□□ -0.72
HDAC6-213ENST00000462730 MTURNQ8N3F0 131 aa10.54□□□□□ -0.72
HDAC6-213ENST00000462730 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
HDAC6-213ENST00000462730 F8W1H4 67 aa10.53□□□□□ -0.72
HDAC6-213ENST00000462730 M0R2P5 195 aa10.53□□□□□ -0.72
HDAC6-213ENST00000462730 C9orf66Q5T8R8 295 aa10.53□□□□□ -0.72
HDAC6-213ENST00000462730 C1orf158Q8N1D5 194 aa10.53□□□□□ -0.72
HDAC6-213ENST00000462730 MAST4O15021 2626 aa10.52□□□□□ -0.72
HDAC6-213ENST00000462730 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.72
HDAC6-213ENST00000462730 DPM2O94777 84 aa10.52□□□□□ -0.72
HDAC6-213ENST00000462730 GCSHP23434 173 aa10.52□□□□□ -0.72
HDAC6-213ENST00000462730 INSL3P51460 131 aa10.52□□□□□ -0.72
HDAC6-213ENST00000462730 C11orf72Q8NBR9 251 aa10.52□□□□□ -0.72
HDAC6-213ENST00000462730 CHAC1Q9BUX1 264 aa10.52□□□□□ -0.72
HDAC6-213ENST00000462730 RPL35AP18077 110 aaKnown RBP10.52□□□□□ -0.73
HDAC6-213ENST00000462730 FXYD2P54710 66 aa10.52□□□□□ -0.73
HDAC6-213ENST00000462730 ORMDL2Q53FV1 153 aa10.52□□□□□ -0.73
HDAC6-213ENST00000462730 ZC2HC1BQ5TFG8 222 aa10.52□□□□□ -0.73
HDAC6-213ENST00000462730 TM2D2Q9BX73 214 aa10.52□□□□□ -0.73
HDAC6-213ENST00000462730 GTSCR1Q86UQ5 136 aa10.51□□□□□ -0.73
HDAC6-213ENST00000462730 FBN1P35555 2871 aaKnown RBP10.5□□□□□ -0.73
HDAC6-213ENST00000462730 TRBV25-1A0A075B6N4 114 aa10.5□□□□□ -0.73
HDAC6-213ENST00000462730 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
HDAC6-213ENST00000462730 SIGMAR1Q99720 223 aa10.5□□□□□ -0.73
HDAC6-213ENST00000462730 SPXQ9BT56 116 aa10.5□□□□□ -0.73
HDAC6-213ENST00000462730 M0QY20 66 aa10.5□□□□□ -0.73
HDAC6-213ENST00000462730 AZU1P20160 251 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms