RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 LINC00694P0DN24 101 aa8.73□□□□□ -1.01
TRAPPC3-205ENST00000462715 DEFB112Q30KQ8 113 aa8.73□□□□□ -1.01
TRAPPC3-205ENST00000462715 DPM3Q9P2X0 92 aa8.73□□□□□ -1.01
TRAPPC3-205ENST00000462715 IGHV4-4A0A075B6R2 117 aa8.73□□□□□ -1.01
TRAPPC3-205ENST00000462715 BUB1B-PAK6H3BSN5 160 aa8.73□□□□□ -1.01
TRAPPC3-205ENST00000462715 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC3-205ENST00000462715 ERCC8Q13216 396 aa8.72□□□□□ -1.01
TRAPPC3-205ENST00000462715 ZNRF2Q8NHG8 242 aa8.72□□□□□ -1.01
TRAPPC3-205ENST00000462715 JMJD1CQ15652 2540 aa8.72□□□□□ -1.01
TRAPPC3-205ENST00000462715 TRBV30A0A0K0K1B3 111 aa8.72□□□□□ -1.01
TRAPPC3-205ENST00000462715 OOSP1A8MZH6 123 aa8.72□□□□□ -1.01
TRAPPC3-205ENST00000462715 IGHV3-33P01772 117 aa8.72□□□□□ -1.01
TRAPPC3-205ENST00000462715 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
TRAPPC3-205ENST00000462715 ZNRD1Q9P1U0 126 aa8.72□□□□□ -1.01
TRAPPC3-205ENST00000462715 HILS1P60008 231 aa8.71□□□□□ -1.01
TRAPPC3-205ENST00000462715 C9orf153Q5TBE3 101 aa8.71□□□□□ -1.01
TRAPPC3-205ENST00000462715 Q6YL49 198 aa8.71□□□□□ -1.01
TRAPPC3-205ENST00000462715 RPL27AP46776 148 aaKnown RBP8.71□□□□□ -1.02
TRAPPC3-205ENST00000462715 ZNF575Q86XF7 245 aa8.71□□□□□ -1.02
TRAPPC3-205ENST00000462715 TMEM86BQ8N661 226 aa8.71□□□□□ -1.02
TRAPPC3-205ENST00000462715 PLEKHB2Q96CS7 222 aa8.71□□□□□ -1.02
TRAPPC3-205ENST00000462715 ASCL2Q99929 193 aa8.71□□□□□ -1.02
TRAPPC3-205ENST00000462715 IGHV3-48P01763 117 aa8.7□□□□□ -1.02
TRAPPC3-205ENST00000462715 POM121L12Q8N7R1 296 aa8.7□□□□□ -1.02
TRAPPC3-205ENST00000462715 SMIM2Q9BVW6 85 aa8.7□□□□□ -1.02
TRAPPC3-205ENST00000462715 CUBNO60494 3623 aa8.7□□□□□ -1.02
TRAPPC3-205ENST00000462715 LY6LH3BQJ8 138 aa8.7□□□□□ -1.02
TRAPPC3-205ENST00000462715 TMEM263Q8WUH6 116 aaKnown RBP8.7□□□□□ -1.02
TRAPPC3-205ENST00000462715 SLC50A1Q9BRV3 221 aa8.7□□□□□ -1.02
TRAPPC3-205ENST00000462715 CXCL5P42830 114 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 MRGPRG-AS1Q2M3A8 158 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 FAM19A5Q7Z5A7 132 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 MRAPQ8TCY5 172 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 CHCHD5Q9BSY4 110 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 DNAJC9-AS1A6NH13 148 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 I3L2K1 104 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 HERVK_113P63121 156 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 C10orf55Q5SWW7 151 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 DYNAPQ8N1N2 210 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 C2CD3Q4AC94 2353 aa8.69□□□□□ -1.02
TRAPPC3-205ENST00000462715 RBAKDNA6NC62 111 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 PPP1R17O96001 155 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 IGHV4-59P01825 116 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 CRYGAP11844 174 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 C17orf77Q96MU5 243 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 C11orf86A6NJI1 115 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 H3BUX3 64 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 GAS8-AS1O95177 125 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 IGKV1-17P01599 117 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 CRYGBP07316 175 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 RPL7P18124 248 aaKnown RBP8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 ESM1Q9NQ30 184 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 MSRB1Q9NZV6 116 aa8.68□□□□□ -1.02
TRAPPC3-205ENST00000462715 SFTA2Q6UW10 78 aa8.67□□□□□ -1.02
TRAPPC3-205ENST00000462715 ZNF491Q8N8L2 437 aa8.67□□□□□ -1.02
TRAPPC3-205ENST00000462715 RNF125Q96EQ8 232 aa8.67□□□□□ -1.02
TRAPPC3-205ENST00000462715 TNCP24821 2201 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 IGHV1-3A0A0C4DH29 117 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 TEX49A0A1B0GTD5 131 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 M0R381 172 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 M0R3E3 92 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 ORM1P02763 201 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 RNASE1P07998 156 aaKnown RBP8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 CRIP2P52943 208 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 TRPT1Q86TN4 253 aaKnown RBP8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 PRIMA1Q86XR5 153 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 DUX5Q96PT3 197 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 A0A0J9YX75 114 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 ZNF56Q15929 161 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 C2orf82Q6UX34 121 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 LINC00643Q86TS7 51 aa8.66□□□□□ -1.02
TRAPPC3-205ENST00000462715 COX7CP15954 63 aa8.65□□□□□ -1.02
TRAPPC3-205ENST00000462715 ZNF80P51504 273 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC3-205ENST00000462715 LY6EQ16553 131 aa8.65□□□□□ -1.02
TRAPPC3-205ENST00000462715 ATRQ13535 2644 aa8.65□□□□□ -1.03
TRAPPC3-205ENST00000462715 CFHR4Q92496 578 aa8.64□□□□□ -1.03
TRAPPC3-205ENST00000462715 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
TRAPPC3-205ENST00000462715 FAM236AA0A1B0GUQ0 79 aa8.64□□□□□ -1.03
TRAPPC3-205ENST00000462715 FAM236BA0A1B0GV22 79 aa8.64□□□□□ -1.03
TRAPPC3-205ENST00000462715 A4D1N5 150 aa8.64□□□□□ -1.03
TRAPPC3-205ENST00000462715 COX6CP09669 75 aa8.64□□□□□ -1.03
TRAPPC3-205ENST00000462715 PMVKQ15126 192 aa8.64□□□□□ -1.03
TRAPPC3-205ENST00000462715 A6NDX4 124 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 TEX22C9J3V5 150 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 EMP1P54849 157 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 SUMO2P61956 95 aaKnown RBP8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 SDIM1Q6ZPB5 146 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 RNF5Q99942 180 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 IGHV3-72A0A0B4J1Y9 119 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 TMEM258P61165 79 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 C2orf66Q6UXQ4 117 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 METTL26Q96S19 204 aa8.63□□□□□ -1.03
TRAPPC3-205ENST00000462715 TRGV11A0A075B6L2 103 aa8.62□□□□□ -1.03
TRAPPC3-205ENST00000462715 IGKV2-40A0A087WW87 121 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC3-205ENST00000462715 H7C423 109 aa8.62□□□□□ -1.03
TRAPPC3-205ENST00000462715 IGKV2D-40P01614 121 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC3-205ENST00000462715 GAGE2AQ6NT46 116 aa8.62□□□□□ -1.03
TRAPPC3-205ENST00000462715 AMELXQ99217 191 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms