RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 TRGV1A0A0A0MS02 117 aa12.52□□□□□ -0.41
SQSTM1-204ENST00000453046 NBDYA0A0U1RRE5 68 aa12.52□□□□□ -0.41
SQSTM1-204ENST00000453046 HOXA5P20719 270 aa12.52□□□□□ -0.41
SQSTM1-204ENST00000453046 AMN1Q8IY45 258 aa12.52□□□□□ -0.41
SQSTM1-204ENST00000453046 RHODO00212 210 aa12.51□□□□□ -0.41
SQSTM1-204ENST00000453046 C14orf178Q8N769 122 aaPredicted RBP12.51□□□□□ -0.41
SQSTM1-204ENST00000453046 PKD1P98161 4303 aa12.51□□□□□ -0.41
SQSTM1-204ENST00000453046 RAB5BP61020 215 aa12.5□□□□□ -0.41
SQSTM1-204ENST00000453046 RNF185Q96GF1 192 aa12.5□□□□□ -0.41
SQSTM1-204ENST00000453046 KIF25-AS1Q9Y6Z4 181 aa12.5□□□□□ -0.41
SQSTM1-204ENST00000453046 DNAH11Q96DT5 4516 aa12.49□□□□□ -0.41
SQSTM1-204ENST00000453046 RS1O15537 224 aa12.49□□□□□ -0.41
SQSTM1-204ENST00000453046 RAB4AP20338 218 aa12.49□□□□□ -0.41
SQSTM1-204ENST00000453046 MRPL51Q4U2R6 128 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-204ENST00000453046 C6orf223Q8N319 242 aa12.49□□□□□ -0.41
SQSTM1-204ENST00000453046 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
SQSTM1-204ENST00000453046 C18orf15Q96N68 181 aa12.49□□□□□ -0.41
SQSTM1-204ENST00000453046 JPT2Q9H910 190 aa12.49□□□□□ -0.41
SQSTM1-204ENST00000453046 DYNC1H1Q14204 4646 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-204ENST00000453046 TRAV4A0A0B4J268 109 aa12.48□□□□□ -0.41
SQSTM1-204ENST00000453046 H3BNG1 76 aa12.48□□□□□ -0.41
SQSTM1-204ENST00000453046 PPBPP02775 128 aa12.48□□□□□ -0.41
SQSTM1-204ENST00000453046 CRYGDP07320 174 aa12.48□□□□□ -0.41
SQSTM1-204ENST00000453046 MGPP08493 103 aa12.48□□□□□ -0.41
SQSTM1-204ENST00000453046 CFAP126Q5VTH2 177 aa12.48□□□□□ -0.41
SQSTM1-204ENST00000453046 Q9H8V8 135 aa12.48□□□□□ -0.41
SQSTM1-204ENST00000453046 A0A087WWL8 130 aa12.47□□□□□ -0.41
SQSTM1-204ENST00000453046 CIDEAO60543 219 aa12.47□□□□□ -0.41
SQSTM1-204ENST00000453046 LINC00315P59091 139 aa12.47□□□□□ -0.41
SQSTM1-204ENST00000453046 FAM74A4Q5TZK3 123 aa12.47□□□□□ -0.41
SQSTM1-204ENST00000453046 ZFP2Q6ZN57 461 aa12.47□□□□□ -0.41
SQSTM1-204ENST00000453046 ORMDL3Q8N138 153 aa12.47□□□□□ -0.41
SQSTM1-204ENST00000453046 KIAA1644Q3SXP7 199 aa12.46□□□□□ -0.41
SQSTM1-204ENST00000453046 UFSP1Q6NVU6 142 aa12.46□□□□□ -0.41
SQSTM1-204ENST00000453046 SAMD10Q9BYL1 202 aa12.46□□□□□ -0.41
SQSTM1-204ENST00000453046 LAMTOR2Q9Y2Q5 125 aa12.46□□□□□ -0.41
SQSTM1-204ENST00000453046 D6R8Y8 96 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST1H2BKO60814 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST1H2BJP06899 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST1H2BOP23527 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 SRIP30626 198 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 CKS2P33552 79 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST1H2BBP33778 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST1H2BDP58876 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST1H2BCP62807 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 ZNF56Q15929 161 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST2H2BEQ16778 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 ESRGQ1W209 222 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 OR4C5Q8NGB2 326 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST1H2BHQ93079 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST1H2BNQ99877 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 HIST1H2BMQ99879 126 aa12.45□□□□□ -0.42
SQSTM1-204ENST00000453046 TNP2Q05952 138 aa12.44□□□□□ -0.42
SQSTM1-204ENST00000453046 TTC32Q5I0X7 151 aa12.44□□□□□ -0.42
SQSTM1-204ENST00000453046 ALKBH7Q9BT30 221 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-204ENST00000453046 A0A096LPF7 62 aa12.43□□□□□ -0.42
SQSTM1-204ENST00000453046 IGHV3-53P01767 116 aa12.43□□□□□ -0.42
SQSTM1-204ENST00000453046 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
SQSTM1-204ENST00000453046 VSIG2Q96IQ7 327 aa12.43□□□□□ -0.42
SQSTM1-204ENST00000453046 PRELID3AQ96N28 172 aa12.43□□□□□ -0.42
SQSTM1-204ENST00000453046 UPK3BQ9BT76 320 aa12.43□□□□□ -0.42
SQSTM1-204ENST00000453046 MRPS16Q9Y3D3 137 aaKnown RBP12.43□□□□□ -0.42
SQSTM1-204ENST00000453046 F5H697 171 aa12.42□□□□□ -0.42
SQSTM1-204ENST00000453046 H7C1H1 209 aa12.42□□□□□ -0.42
SQSTM1-204ENST00000453046 PAX4O43316 350 aa12.42□□□□□ -0.42
SQSTM1-204ENST00000453046 NCR2O95944 276 aa12.42□□□□□ -0.42
SQSTM1-204ENST00000453046 PPP1R17O96001 155 aa12.42□□□□□ -0.42
SQSTM1-204ENST00000453046 TRAV26-2A0A0B4J265 109 aa12.41□□□□□ -0.42
SQSTM1-204ENST00000453046 SMKR1H3BMG3 65 aa12.41□□□□□ -0.42
SQSTM1-204ENST00000453046 OR10J3Q5JRS4 329 aa12.41□□□□□ -0.42
SQSTM1-204ENST00000453046 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
SQSTM1-204ENST00000453046 KRTAP17-1Q9BYP8 105 aa12.41□□□□□ -0.42
SQSTM1-204ENST00000453046 TMA7Q9Y2S6 64 aaKnown RBP12.41□□□□□ -0.42
SQSTM1-204ENST00000453046 ICOSQ9Y6W8 199 aa12.41□□□□□ -0.42
SQSTM1-204ENST00000453046 Q0VG73 95 aa12.4□□□□□ -0.42
SQSTM1-204ENST00000453046 NRACQ8N912 160 aa12.4□□□□□ -0.42
SQSTM1-204ENST00000453046 C18orf32Q8TCD1 76 aa12.4□□□□□ -0.42
SQSTM1-204ENST00000453046 PRO0255Q9UI72 69 aa12.4□□□□□ -0.42
SQSTM1-204ENST00000453046 IGHV3-73A0A0B4J1V6 119 aa12.39□□□□□ -0.43
SQSTM1-204ENST00000453046 M0QY20 66 aa12.39□□□□□ -0.43
SQSTM1-204ENST00000453046 TNFRSF6BO95407 300 aa12.39□□□□□ -0.43
SQSTM1-204ENST00000453046 NPYP01303 97 aa12.39□□□□□ -0.43
SQSTM1-204ENST00000453046 HHLA3Q9XRX5 114 aa12.39□□□□□ -0.43
SQSTM1-204ENST00000453046 PCLOQ9Y6V0 5065 aa12.39□□□□□ -0.43
SQSTM1-204ENST00000453046 C16orf90A8MZG2 172 aa12.38□□□□□ -0.43
SQSTM1-204ENST00000453046 KRTAP1-5Q9BYS1 174 aa12.38□□□□□ -0.43
SQSTM1-204ENST00000453046 MAP1LC3AQ9H492 121 aa12.38□□□□□ -0.43
SQSTM1-204ENST00000453046 TRGV4A0A0C4DH28 118 aa12.37□□□□□ -0.43
SQSTM1-204ENST00000453046 K7EQD1 137 aa12.37□□□□□ -0.43
SQSTM1-204ENST00000453046 GAS8-AS1O95177 125 aa12.37□□□□□ -0.43
SQSTM1-204ENST00000453046 GATA1P15976 413 aaPredicted RBP12.37□□□□□ -0.43
SQSTM1-204ENST00000453046 COA6Q5JTJ3 125 aaKnown RBP12.37□□□□□ -0.43
SQSTM1-204ENST00000453046 C20orf78Q9BR46 151 aa12.37□□□□□ -0.43
SQSTM1-204ENST00000453046 TRBV10-1A0A0K0K1A3 114 aa12.36□□□□□ -0.43
SQSTM1-204ENST00000453046 TRBV6-5A0A0K0K1A5 114 aa12.36□□□□□ -0.43
SQSTM1-204ENST00000453046 S100A6P06703 90 aa12.36□□□□□ -0.43
SQSTM1-204ENST00000453046 CRYBA4P53673 196 aa12.36□□□□□ -0.43
SQSTM1-204ENST00000453046 FHL2Q14192 279 aa12.36□□□□□ -0.43
SQSTM1-204ENST00000453046 RPL39LQ96EH5 51 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms