RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 OBSCN-AS1Q96MR7 158 aa7.96□□□□□ -1.14
LINC00342-202ENST00000448494 PI4KAP42356 2102 aa7.95□□□□□ -1.14
LINC00342-202ENST00000448494 RIF1Q5UIP0 2472 aaKnown RBP7.95□□□□□ -1.14
LINC00342-202ENST00000448494 IGHV3-64A0A075B6Q5 118 aa7.95□□□□□ -1.14
LINC00342-202ENST00000448494 CCL21O00585 134 aa7.95□□□□□ -1.14
LINC00342-202ENST00000448494 LHBP01229 141 aa7.95□□□□□ -1.14
LINC00342-202ENST00000448494 IGLV3-19P01714 112 aa7.95□□□□□ -1.14
LINC00342-202ENST00000448494 POLR2KP53803 58 aaKnown RBP7.95□□□□□ -1.14
LINC00342-202ENST00000448494 RBM3P98179 157 aaKnown RBP7.95□□□□□ -1.14
LINC00342-202ENST00000448494 GVINP1Q7Z2Y8 2422 aa7.95□□□□□ -1.14
LINC00342-202ENST00000448494 K7EIM0 57 aa7.95□□□□□ -1.14
LINC00342-202ENST00000448494 NXPH4O95158 308 aa7.95□□□□□ -1.14
LINC00342-202ENST00000448494 RPL28P46779 137 aaKnown RBP7.95□□□□□ -1.14
LINC00342-202ENST00000448494 SS18Q15532 418 aa7.95□□□□□ -1.14
LINC00342-202ENST00000448494 CACNA1BQ00975 2339 aa7.94□□□□□ -1.14
LINC00342-202ENST00000448494 TRBV10-3A0A0K0K1G6 114 aa7.94□□□□□ -1.14
LINC00342-202ENST00000448494 PLAC8L1A1L4L8 177 aa7.94□□□□□ -1.14
LINC00342-202ENST00000448494 TRBV12-3P01733 135 aa7.94□□□□□ -1.14
LINC00342-202ENST00000448494 MGPP08493 103 aa7.94□□□□□ -1.14
LINC00342-202ENST00000448494 Q8N2B8 174 aa7.94□□□□□ -1.14
LINC00342-202ENST00000448494 NDUFA12Q9UI09 145 aa7.94□□□□□ -1.14
LINC00342-202ENST00000448494 TRBV27A0A0K0K1C4 114 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 APELAP0DMC3 54 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 MED14OSP0DP75 135 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 MRPS21P82921 87 aaKnown RBP7.93□□□□□ -1.14
LINC00342-202ENST00000448494 OVOL2Q9BRP0 275 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 RNF7Q9UBF6 113 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 MYO15AQ9UKN7 3530 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 NACAE9PAV3 2078 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 IGHV1-18A0A0C4DH31 117 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 IGHV1-58A0A0C4DH39 117 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 SNRPD3P62318 126 aaKnown RBP7.93□□□□□ -1.14
LINC00342-202ENST00000448494 SMAD5-AS1Q9Y6J3 95 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 DOCK10Q96BY6 2186 aa7.93□□□□□ -1.14
LINC00342-202ENST00000448494 PRRC2AP48634 2157 aaKnown RBP7.92□□□□□ -1.14
LINC00342-202ENST00000448494 TRAV23DV6A0A075B6W5 121 aa7.92□□□□□ -1.14
LINC00342-202ENST00000448494 MSMPQ1L6U9 139 aa7.92□□□□□ -1.14
LINC00342-202ENST00000448494 ARFGEF3Q5TH69 2177 aa7.92□□□□□ -1.14
LINC00342-202ENST00000448494 ADARB2-AS1A8MUL3 147 aa7.92□□□□□ -1.14
LINC00342-202ENST00000448494 ZGRF1Q86YA3 2104 aa7.91□□□□□ -1.14
LINC00342-202ENST00000448494 PRAC2D3DTV9 90 aa7.91□□□□□ -1.14
LINC00342-202ENST00000448494 FOLR3P41439 243 aa7.91□□□□□ -1.14
LINC00342-202ENST00000448494 HILS1P60008 231 aa7.91□□□□□ -1.14
LINC00342-202ENST00000448494 IGFL4Q6B9Z1 124 aa7.91□□□□□ -1.14
LINC00342-202ENST00000448494 GAFA1Q96PS6 74 aa7.91□□□□□ -1.14
LINC00342-202ENST00000448494 ZNF580Q9UK33 172 aa7.91□□□□□ -1.14
LINC00342-202ENST00000448494 TRAV13-2A0A0B4J235 113 aa7.9□□□□□ -1.14
LINC00342-202ENST00000448494 A0A0J9YXV3 536 aa7.9□□□□□ -1.14
LINC00342-202ENST00000448494 PINLYPA6NC86 204 aa7.9□□□□□ -1.14
LINC00342-202ENST00000448494 C14orf132Q9NPU4 83 aa7.9□□□□□ -1.14
LINC00342-202ENST00000448494 ZNF292O60281 2723 aa7.9□□□□□ -1.14
LINC00342-202ENST00000448494 IGHV5-10-1A0A0J9YXX1 117 aa7.9□□□□□ -1.15
LINC00342-202ENST00000448494 IBA57-AS1B1ANH7 110 aa7.9□□□□□ -1.15
LINC00342-202ENST00000448494 F8WEM9 126 aa7.9□□□□□ -1.15
LINC00342-202ENST00000448494 SAA4P35542 130 aa7.9□□□□□ -1.15
LINC00342-202ENST00000448494 CCL13Q99616 98 aa7.9□□□□□ -1.15
LINC00342-202ENST00000448494 A8MZ25 164 aa7.89□□□□□ -1.15
LINC00342-202ENST00000448494 MRPL53Q96EL3 112 aaKnown RBP7.89□□□□□ -1.15
LINC00342-202ENST00000448494 FAM218AQ96MZ4 157 aa7.89□□□□□ -1.15
LINC00342-202ENST00000448494 MOB4Q9Y3A3 225 aa7.89□□□□□ -1.15
LINC00342-202ENST00000448494 PHLDA3Q9Y5J5 127 aa7.89□□□□□ -1.15
LINC00342-202ENST00000448494 SDK2Q58EX2 2172 aa7.89□□□□□ -1.15
LINC00342-202ENST00000448494 TRBV6-5A0A0K0K1A5 114 aa7.89□□□□□ -1.15
LINC00342-202ENST00000448494 BUB1B-PAK6H3BSN5 160 aa7.89□□□□□ -1.15
LINC00342-202ENST00000448494 SOCS3O14543 225 aa7.89□□□□□ -1.15
LINC00342-202ENST00000448494 DMDP11532 3685 aa7.88□□□□□ -1.15
LINC00342-202ENST00000448494 DMXL1Q9Y485 3027 aa7.88□□□□□ -1.15
LINC00342-202ENST00000448494 IGKV3-15P01624 115 aa7.88□□□□□ -1.15
LINC00342-202ENST00000448494 BLCAPP62952 87 aa7.88□□□□□ -1.15
LINC00342-202ENST00000448494 C4orf48Q5BLP8 95 aa7.88□□□□□ -1.15
LINC00342-202ENST00000448494 C9orf47Q6ZRZ4 202 aa7.88□□□□□ -1.15
LINC00342-202ENST00000448494 FAM110DQ8TAY7 271 aaPredicted RBP7.88□□□□□ -1.15
LINC00342-202ENST00000448494 NCOR2Q9Y618 2525 aa7.88□□□□□ -1.15
LINC00342-202ENST00000448494 PAX4O43316 350 aa7.88□□□□□ -1.15
LINC00342-202ENST00000448494 VPS13AQ96RL7 3174 aa7.87□□□□□ -1.15
LINC00342-202ENST00000448494 S100A4P26447 101 aaKnown RBP7.87□□□□□ -1.15
LINC00342-202ENST00000448494 LENEPQ9Y5L5 61 aa7.87□□□□□ -1.15
LINC00342-202ENST00000448494 OTOGLQ3ZCN5 2332 aa7.87□□□□□ -1.15
LINC00342-202ENST00000448494 IGHV1-2P23083 117 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 LINC00315P59091 139 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 LINC00308Q8TCZ7 52 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 KIF25-AS1Q9Y6Z4 181 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 PRR14LQ5THK1 2151 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 PLXNB1O43157 2135 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 KNL1Q8NG31 2342 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 EPG5Q9HCE0 2579 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 IGLV4-3A0A075B6K6 122 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 MRPL55Q7Z7F7 128 aaKnown RBP7.86□□□□□ -1.15
LINC00342-202ENST00000448494 OPRPNQ99935 248 aaPredicted RBP7.86□□□□□ -1.15
LINC00342-202ENST00000448494 Q9HAA7 133 aa7.86□□□□□ -1.15
LINC00342-202ENST00000448494 EP300Q09472 2414 aaPredicted RBP7.86□□□□□ -1.15
LINC00342-202ENST00000448494 RNASE4P34096 147 aaKnown RBP7.85□□□□□ -1.15
LINC00342-202ENST00000448494 RMI2Q96E14 147 aa7.85□□□□□ -1.15
LINC00342-202ENST00000448494 NDUFA1O15239 70 aa7.85□□□□□ -1.15
LINC00342-202ENST00000448494 Q6ZS52 159 aa7.85□□□□□ -1.15
LINC00342-202ENST00000448494 STHQ8IWL8 128 aa7.85□□□□□ -1.15
LINC00342-202ENST00000448494 CEP250Q9BV73 2442 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 HIST2H2BCQ6DN03 193 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 HIST2H2BDQ6DRA6 164 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 SUMO4Q6EEV6 95 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms