RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 TMSB15BA0A087X1C1 80 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 A0A096LNJ9 63 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 PINLYPA6NC86 204 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ATOX1O00244 68 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 SLC25A20O43772 301 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 KRTAP27-1Q3LI81 207 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 C9orf66Q5T8R8 295 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 RNASE6Q93091 150 aaKnown RBP4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TRGV9Q99603 122 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 PCNX2A6NKB5 2137 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 DYSFO75923 2080 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGHV3OR15-7A0A075B7D8 119 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGKV3D-15A0A087WSY6 115 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 K7EMI3 77 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TIMM17BO60830 172 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 COX7A1P24310 79 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 UBE2D1P51668 147 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 HERVK_113P61574 105 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 UBE2L3P68036 154 aaKnown RBP4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ZFP2Q6ZN57 461 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 MGST2Q99735 147 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 RPP21Q9H633 154 aaKnown RBP4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 C19orf71A6NCJ1 209 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 LINC01549A6NIU2 74 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 PEX7O00628 323 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 FCER1GP30273 86 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 BSPH1Q075Z2 132 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 CIRBPQ14011 172 aaKnown RBP4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 SS18Q15532 418 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 FP248Q71RG6 208 aaPredicted RBP4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 DAND5Q8N907 189 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TTTY12Q9BZ98 90 aa4.22□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGHV3-16A0A0C4DH30 117 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 hADV29S1A0JD25 119 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 P0C879 139 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 PLA2G2AP14555 144 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 EFNA4P52798 201 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ZNF56Q15929 161 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 TMEM170BQ5T4T1 132 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CD177Q8N6Q3 437 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 DIRC1Q969H9 104 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 DPM3Q9P2X0 92 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 PRRC2CQ9Y520 2896 aaKnown RBP4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 AGRNO00468 2067 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 A0A1W2PNU3 283 aaPredicted RBP4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 H3BMM0 161 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CHTF8P0CG12 524 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CD24P25063 80 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 RNASE4P34096 147 aaKnown RBP4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 FUSP35637 526 aaKnown RBP eCLIP4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 UBE2AP49459 152 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ATP5EP56381 51 aaPredicted RBP4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ZNF816Q0VGE8 651 aaPredicted RBP4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 PIGYQ3MUY2 71 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 SMIM29Q86T20 159 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 Q8N2B8 174 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 UBE2WQ96B02 151 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 TTTY13Q9BZ97 58 aa4.21□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CACNA1HO95180 2353 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 IGKV1-12A0A0C4DH73 117 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 IGKV1D-12P01611 117 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 IGHV3-48P01763 117 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ZNF137PP52743 207 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 DEFB121Q5J5C9 76 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ITLN1Q8WWA0 313 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ITLN2Q8WWU7 325 aaPredicted RBP4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 RMI2Q96E14 147 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 Q9H3A6 140 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 TRAV17A0A0B4J275 112 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 IGKV1-6A0A0C4DH72 117 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ACYP1P07311 99 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 IFI27P40305 119 aaPredicted RBP4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 FGF12P61328 243 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 TRBV6-6A0A0A6YYG2 114 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 COL8A2P25067 703 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 BLCAPP62952 87 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 MIR17HGQ75NE6 70 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 NXT2Q9NPJ8 142 aaKnown RBP4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 U3KQK5 164 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CELSR3Q9NYQ7 3312 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ESPL1Q14674 2120 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 TTC28Q96AY4 2481 aa4.19□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 A0A1B0GW54 56 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CCL8P80075 99 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CEMP1Q6PRD7 247 aaPredicted RBP4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 SLC25A29Q8N8R3 303 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CELA1Q9UNI1 258 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 EP300Q09472 2414 aaPredicted RBP4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 TRBV10-2A0A0K0K1G8 114 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 IGKV1-16P04430 117 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 SOSTDC1Q6X4U4 206 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 C5orf38Q86SI9 138 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 NDUFA11Q86Y39 141 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 Q8NBF4 154 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CSNK1G2-AS1Q8NCQ2 148 aa4.18□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CNOT1A5YKK6 2376 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms