RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 Q6ZQT0 140 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 SPTSSBQ8NFR3 76 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 MUC7Q8TAX7 377 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 C18orf32Q8TCD1 76 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 ODF3Q96PU9 254 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 MGST2Q99735 147 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 SMDT1Q9H4I9 107 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 HEATR1Q9H583 2144 aaKnown RBP1.48□□□□□ -2.17
CLK1-204ENST00000432425 COL11A1P12107 1806 aaPredicted RBP1.48□□□□□ -2.17
CLK1-204ENST00000432425 KIAA1549LQ6ZVL6 1849 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 MROH2AA6NES4 1674 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 PREX1Q8TCU6 1659 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 CTTNBP2Q8WZ74 1663 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.48□□□□□ -2.17
CLK1-204ENST00000432425 LRRC7Q96NW7 1537 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 MED13Q9UHV7 2174 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 PIK3C2BO00750 1634 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 RNF17Q9BXT8 1623 aaKnown RBP1.48□□□□□ -2.17
CLK1-204ENST00000432425 COL4A6Q14031 1691 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 CFAP43Q8NDM7 1665 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 TRAV7A0A075B6U4 112 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 C16orf90A8MZG2 172 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 UMAD1C9J7I0 102 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 LHBP01229 141 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 MGST1P10620 155 aaKnown RBP1.48□□□□□ -2.17
CLK1-204ENST00000432425 EFNA4P52798 201 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 NNATQ16517 81 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 Q1T7F1 81 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 ASB16-AS1Q495Z4 193 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 CFAP126Q5VTH2 177 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 LYPD5Q6UWN5 251 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 TMEM136Q6ZRR5 245 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 SPANXA2-OT1Q8N9U9 137 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 CMTM2Q8TAZ6 248 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 DYNLRB2Q8TF09 96 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 Q96M85 177 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 TRGV9Q99603 122 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 SMIM7Q9BQ49 75 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 LAMB2P55268 1798 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 NESP48681 1621 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 GBF1Q92538 1859 aa1.48□□□□□ -2.17
CLK1-204ENST00000432425 PTPRMP28827 1452 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 NRXN1Q9ULB1 1477 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 SPTBP11277 2137 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 ZGRF1Q86YA3 2104 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 TOP2BQ02880 1626 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 A0A087WWC5 75 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 IGKV2-24A0A0C4DH68 120 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 A0A0G2JND7 137 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 C11orf86A6NJI1 115 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 ASAH2BP0C7U1 165 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 MPV17LQ2QL34 196 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 SPANXN1Q5VSR9 72 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 RPL7L1Q6DKI1 246 aaKnown RBP1.47□□□□□ -2.17
CLK1-204ENST00000432425 DYNAPQ8N1N2 210 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 RPRMLQ8N4K4 120 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 TMEM141Q96I45 108 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 MRPL35Q9NZE8 188 aaKnown RBP1.47□□□□□ -2.17
CLK1-204ENST00000432425 TIMM9Q9Y5J7 89 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 MINOS1-NBL1R4GNA1 71 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 MDC1Q14676 2089 aaKnown RBP1.47□□□□□ -2.17
CLK1-204ENST00000432425 AFDNP55196 1824 aaKnown RBP1.47□□□□□ -2.17
CLK1-204ENST00000432425 ADAMTS7Q9UKP4 1686 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 MYO7AQ13402 2215 aa1.47□□□□□ -2.17
CLK1-204ENST00000432425 LTBP4Q8N2S1 1624 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 NUP188Q5SRE5 1749 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 CRYBG1Q9Y4K1 1723 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 ZNF236Q9UL36 1845 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 TRBV10-2A0A0K0K1G8 114 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 H3BQ85 93 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 H7BZZ5 65 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 H7C2G1 150 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 MPV17P39210 176 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 KRTDAPP60985 99 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 SLC48A1Q6P1K1 146 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 SFTA2Q6UW10 78 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 CYP2G1PQ6ZSU1 146 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 FAM223AQ8IWN6 122 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 TMEM105Q8N8V8 129 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 LINC00467Q9BRT7 94 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 BPESC1Q9GZL8 116 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 TRAPPC1Q9Y5R8 145 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 OTOGLQ3ZCN5 2332 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 IFT172Q9UG01 1749 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 ANKRD36A6QL64 1941 aa1.46□□□□□ -2.18
CLK1-204ENST00000432425 RP1P56715 2156 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 UBR3Q6ZT12 1888 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 ABCC8Q09428 1581 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 KANTRA0A1W2PQU2 76 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 HCG22E2RYF7 251 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 C17orf112F2Z3M2 114 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 P0C880 135 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 CD24P25063 80 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 C9orf116Q5BN46 136 aaPredicted RBP1.45□□□□□ -2.18
CLK1-204ENST00000432425 CASC2Q6XLA1 102 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 C20orf166-AS1Q96NR2 134 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 MANBALQ9NQG1 85 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 TSC2P49815 1807 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 CLASP1Q7Z460 1538 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 ASXL1Q8IXJ9 1541 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms