RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SPINK8P0C7L1 97 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 MED14OSP0DP75 135 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 SEC61BP60468 96 aaKnown RBP6.09□□□□□ -1.43
VTI1A-202ENST00000432306 EBI3Q14213 229 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 PAPPA-AS1Q5QFB9 102 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 DYNAPQ8N1N2 210 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 Q8TAT8 98 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 RASL10AQ92737 203 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 BUB3O43684 328 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 LY6G6DO95868 133 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 TMEM78Q5T7P6 136 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 C9orf47Q6ZRZ4 202 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 ODF3BA8MYP8 253 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 OOSP1A8MZH6 123 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 TIMM23O14925 209 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 PPP1R17O96001 155 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 CRYGDP07320 174 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 ASIPP42127 132 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 DLX1P56177 255 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 BSPH1Q075Z2 132 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 Q6Q795 121 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 NDUFA11Q86Y39 141 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 Q8N6K4 173 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 CARD19Q96LW7 228 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 C11orf21Q9P2W6 132 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 DPM3Q9P2X0 92 aa6.08□□□□□ -1.44
VTI1A-202ENST00000432306 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
VTI1A-202ENST00000432306 TRGV3P03979 118 aa6.07□□□□□ -1.44
VTI1A-202ENST00000432306 AGPAT4-IT1Q9H0P7 198 aa6.07□□□□□ -1.44
VTI1A-202ENST00000432306 SS18L2Q9UHA2 77 aa6.07□□□□□ -1.44
VTI1A-202ENST00000432306 SONP18583 2426 aaKnown RBP6.06□□□□□ -1.44
VTI1A-202ENST00000432306 HEATR1Q9H583 2144 aaKnown RBP6.06□□□□□ -1.44
VTI1A-202ENST00000432306 ZNF688P0C7X2 276 aa6.06□□□□□ -1.44
VTI1A-202ENST00000432306 EFNA4P52798 201 aa6.06□□□□□ -1.44
VTI1A-202ENST00000432306 C10orf126Q8N4M7 172 aa6.06□□□□□ -1.44
VTI1A-202ENST00000432306 SCGB3A1Q96QR1 104 aa6.06□□□□□ -1.44
VTI1A-202ENST00000432306 PRADC1Q9BSG0 188 aa6.06□□□□□ -1.44
VTI1A-202ENST00000432306 A0A0J9YY99 117 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 A8MWV9 139 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 PRAC2D3DTV9 90 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 M0R1W7 72 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 C9orf139Q6ZV77 190 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 HRNRQ86YZ3 2850 aaPredicted RBP6.05□□□□□ -1.44
VTI1A-202ENST00000432306 VPS13CQ709C8 3753 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 IGHV4OR15-8A0A075B7B6 117 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 A0A087WW49 117 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 TRAV8-2A0A0B4J237 113 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 CLPSL1A2RUU4 121 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 ZNF815PA8K554 130 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 NXPH4O95158 308 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 IGHV3-30P01768 117 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 IGHV3-30-5P0DP03 117 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 HLA-DMBP28068 263 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 NDPQ00604 133 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 GAGE5Q13069 117 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 GAGE6Q13070 117 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 C1orf195Q5TG92 126 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 C2orf66Q6UXQ4 117 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 SLC25A29Q8N8R3 303 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 SPANXCQ9NY87 97 aa6.05□□□□□ -1.44
VTI1A-202ENST00000432306 C11orf86A6NJI1 115 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 INAFM1C9JVW0 142 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 E7EQL1 145 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 TCL1BO95988 128 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 P0DMU3 169 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 FAM231AP0DMU4 169 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 FAM231CP0DMU5 169 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 RPL18AQ02543 176 aaKnown RBP6.04□□□□□ -1.44
VTI1A-202ENST00000432306 PMVKQ15126 192 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 TIMM17AQ99595 171 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 PPDPFQ9H3Y8 114 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 DPH3P1Q9H4G8 78 aa6.04□□□□□ -1.44
VTI1A-202ENST00000432306 IGLV4-69A0A075B6H9 119 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 A0A0B4J2C4 111 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 CFC1BP0CG36 223 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 CFC1P0CG37 223 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 PRTN3P24158 256 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 COX7A1P24310 79 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 CADP27708 2225 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 HERVK_113P61574 105 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 SPANXN1Q5VSR9 72 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 ZFAND6Q6FIF0 208 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 ZFP2Q6ZN57 461 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 DNAJC30Q96LL9 226 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 AMELXQ99217 191 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 DYNLRB1Q9NP97 96 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 MXRA5Q9NR99 2828 aa6.03□□□□□ -1.44
VTI1A-202ENST00000432306 TRAV26-2A0A0B4J265 109 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 IGIPA6NJ69 53 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 SAA4P35542 130 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 PSMB2P49721 201 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 SRSF9Q13242 221 aaKnown RBP eCLIP6.02□□□□□ -1.45
VTI1A-202ENST00000432306 MINOS1Q5TGZ0 78 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 TMEM86BQ8N661 226 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 TEX29Q8N6K0 151 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 C11orf45Q8TAV5 145 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 EEF1AKMT3Q96AZ1 226 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 PLEKHB2Q96CS7 222 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms