RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ZNF609O15014 1411 aa1.14□□□□□ -2.23
HMGB1P9-201ENST00000429856 CPSF1Q10570 1443 aaKnown RBP1.14□□□□□ -2.23
HMGB1P9-201ENST00000429856 SPAG17Q6Q759 2223 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 THOC2Q8NI27 1593 aaKnown RBP1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 TCHHQ07283 1943 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 IFT140Q96RY7 1462 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 PRDM2Q13029 1718 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 ABCA3Q99758 1704 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 NCOA6Q14686 2063 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 HIGD1CA8MV81 97 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 HCG22E2RYF7 251 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 TMEM262E9PQX1 116 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 FXYD4P59646 89 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 GNG2P59768 71 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 RPL37AP61513 92 aaKnown RBP1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 SBSPONQ8IVN8 264 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 AQP10Q96PS8 301 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 PDE4DIPQ5VU43 2346 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 RREB1Q92766 1687 aa1.13□□□□□ -2.23
HMGB1P9-201ENST00000429856 PHIPQ8WWQ0 1821 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 CDK12Q9NYV4 1490 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 ANKRD26Q9UPS8 1709 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 PIGBOS1A0A0B4J2F0 54 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 IGKV3D-7A0A0C4DH55 119 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 IGKV3OR2-268A0A0C4DH90 116 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 TRBV10-3A0A0K0K1G6 114 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 NBDYA0A0U1RRE5 68 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 UBE2L5PA0A1B0GUS4 154 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 RBAKDNA6NC62 111 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 UBE2L3P68036 154 aaKnown RBP1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 DCDP81605 110 aaKnown RBP1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 COL5A1-AS1Q5SY13 56 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 AMELYQ99218 206 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 CYSTM1Q9H1C7 97 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 DOCK11Q5JSL3 2073 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 NRXN2Q9P2S2 1712 aa1.12□□□□□ -2.23
HMGB1P9-201ENST00000429856 COL4A1P02462 1669 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 PSME4Q14997 1843 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 TRAV13-2A0A0B4J235 113 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 IGKV2-29A2NJV5 120 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 SNCAP37840 140 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 CCL8P80075 99 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 FXYD3Q14802 87 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 CYP2G1PQ6ZSU1 146 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 COMMD6Q7Z4G1 85 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 DEFB132Q7Z7B7 95 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 LINC00474Q9P2X8 69 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 C10orf71Q711Q0 1435 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 TTC37Q6PGP7 1564 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 LAMC3Q9Y6N6 1575 aa1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 TNS1Q9HBL0 1735 aaKnown RBP1.11□□□□□ -2.23
HMGB1P9-201ENST00000429856 E9PCH4 1651 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 TOP2AP11388 1531 aaKnown RBP1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 USP24Q9UPU5 2620 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 TANC1Q9C0D5 1861 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 CASKIN1Q8WXD9 1431 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 J3QKU1 62 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 SSSCA1O60232 199 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 SIX6O95475 246 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 UBE2D1P51668 147 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 C20orf197Q8N268 126 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 NESP48681 1621 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 SHROOM2Q13796 1616 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 RP1L1Q8IWN7 2480 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 ARHGAP5Q13017 1502 aa1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 FLG2Q5D862 2391 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P9-201ENST00000429856 TEX49A0A1B0GTD5 131 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 CLPSL1A2RUU4 121 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 MT-ATP8P03928 68 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 ATP5EP56381 51 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 XAF1Q6GPH4 301 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 ZNF818PQ6ZRF7 136 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 C4orf33Q8N1A6 199 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 C5orf56Q8N8D9 126 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 TSLPQ969D9 159 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 LINC00208Q96KT6 92 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 DPY30Q9C005 99 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 LINC00312Q9Y6C7 94 aa1.09□□□□□ -2.23
HMGB1P9-201ENST00000429856 KIF21AQ7Z4S6 1674 aa1.09□□□□□ -2.24
HMGB1P9-201ENST00000429856 CACNA1BQ00975 2339 aa1.09□□□□□ -2.24
HMGB1P9-201ENST00000429856 MED13LQ71F56 2210 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 ASCC3Q8N3C0 2202 aaKnown RBP1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 MAP2P11137 1827 aaKnown RBP1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 ABCC5O15440 1437 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 SCAPERQ9BY12 1400 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 TET3O43151 1660 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 CFAP43Q8NDM7 1665 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 RAPGEF2Q9Y4G8 1499 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 IGKV2-40A0A087WW87 121 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 PVALEFA0A1B0GWK0 134 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 H3BQ15 152 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 IGKV2D-40P01614 121 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 PI4KAP42356 2102 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 UBA52P62987 128 aaKnown RBP1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 C10orf128Q5T292 105 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 LOC285556D6RIA3 1793 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 TRANK1O15050 2925 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 DNMBPQ6XZF7 1577 aa1.08□□□□□ -2.24
HMGB1P9-201ENST00000429856 CHD8Q9HCK8 2581 aa1.07□□□□□ -2.24
HMGB1P9-201ENST00000429856 FBN3Q75N90 2809 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms