RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 C5orf56Q8N8D9 126 aa10.73□□□□□ -0.69
MSH5-206ENST00000423982 OPRPNQ99935 248 aaPredicted RBP10.73□□□□□ -0.69
MSH5-206ENST00000423982 GEMIN7Q9H840 131 aaKnown RBP10.73□□□□□ -0.69
MSH5-206ENST00000423982 ZNRF2Q8NHG8 242 aa10.73□□□□□ -0.69
MSH5-206ENST00000423982 LINC00315P59091 139 aa10.72□□□□□ -0.69
MSH5-206ENST00000423982 LINC00477Q96M19 166 aa10.72□□□□□ -0.69
MSH5-206ENST00000423982 IGIPA6NJ69 53 aa10.72□□□□□ -0.69
MSH5-206ENST00000423982 SOCS3O14543 225 aa10.72□□□□□ -0.69
MSH5-206ENST00000423982 LY6EQ16553 131 aa10.72□□□□□ -0.69
MSH5-206ENST00000423982 Q6ZUT4 128 aa10.72□□□□□ -0.69
MSH5-206ENST00000423982 IGHV3-64A0A075B6Q5 118 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 TRAV41A0A0B4J266 112 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 KLK9Q2XQG4 91 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 TCTEX1D4Q5JR98 221 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 KLK9Q9UKQ9 250 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 HIVEP1P15822 2718 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 SORL1Q92673 2214 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 IGHV3-30P01768 117 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 IGHV3-30-5P0DP03 117 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 RAX2Q96IS3 184 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 SMR3AQ99954 134 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 KIF25-AS1Q9Y6Z4 181 aa10.71□□□□□ -0.69
MSH5-206ENST00000423982 F5H697 171 aa10.71□□□□□ -0.7
MSH5-206ENST00000423982 H7C2G1 150 aa10.71□□□□□ -0.7
MSH5-206ENST00000423982 CRIP2P52943 208 aaPredicted RBP10.71□□□□□ -0.7
MSH5-206ENST00000423982 CRYBA4P53673 196 aa10.71□□□□□ -0.7
MSH5-206ENST00000423982 SUMO4Q6EEV6 95 aa10.71□□□□□ -0.7
MSH5-206ENST00000423982 EIF4EBP3O60516 100 aaPredicted RBP10.7□□□□□ -0.7
MSH5-206ENST00000423982 FAM74A4Q5TZK3 123 aa10.7□□□□□ -0.7
MSH5-206ENST00000423982 ATP6V0E2Q8NHE4 81 aa10.7□□□□□ -0.7
MSH5-206ENST00000423982 LENEPQ9Y5L5 61 aa10.7□□□□□ -0.7
MSH5-206ENST00000423982 GATA3P23771 443 aa10.69□□□□□ -0.7
MSH5-206ENST00000423982 PMVKQ15126 192 aa10.69□□□□□ -0.7
MSH5-206ENST00000423982 TEN1Q86WV5 123 aa10.69□□□□□ -0.7
MSH5-206ENST00000423982 ANKRD29Q8N6D5 301 aa10.69□□□□□ -0.7
MSH5-206ENST00000423982 DUX5Q96PT3 197 aa10.69□□□□□ -0.7
MSH5-206ENST00000423982 ZNF256Q9Y2P7 627 aaPredicted RBP10.69□□□□□ -0.7
MSH5-206ENST00000423982 SCGB1C2P0DMR2 95 aa10.69□□□□□ -0.7
MSH5-206ENST00000423982 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
MSH5-206ENST00000423982 AMELXQ99217 191 aa10.69□□□□□ -0.7
MSH5-206ENST00000423982 HIVEP2P31629 2446 aa10.69□□□□□ -0.7
MSH5-206ENST00000423982 OVOL1O14753 267 aa10.68□□□□□ -0.7
MSH5-206ENST00000423982 PPDPFLQ8WWR9 84 aa10.68□□□□□ -0.7
MSH5-206ENST00000423982 FAM19A4Q96LR4 140 aa10.68□□□□□ -0.7
MSH5-206ENST00000423982 ZNF580Q9UK33 172 aa10.68□□□□□ -0.7
MSH5-206ENST00000423982 SDHAF1A6NFY7 115 aa10.68□□□□□ -0.7
MSH5-206ENST00000423982 POLR2KP53803 58 aaKnown RBP10.68□□□□□ -0.7
MSH5-206ENST00000423982 H3BUX3 64 aa10.67□□□□□ -0.7
MSH5-206ENST00000423982 C10orf126Q8N4M7 172 aa10.67□□□□□ -0.7
MSH5-206ENST00000423982 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
MSH5-206ENST00000423982 TRAV12-3A0A0B4J271 114 aa10.67□□□□□ -0.7
MSH5-206ENST00000423982 HERVK_113P61574 105 aa10.67□□□□□ -0.7
MSH5-206ENST00000423982 J3QQQ9 107 aa10.66□□□□□ -0.7
MSH5-206ENST00000423982 IGKV3-20P01619 116 aa10.66□□□□□ -0.7
MSH5-206ENST00000423982 DEFB112Q30KQ8 113 aa10.66□□□□□ -0.7
MSH5-206ENST00000423982 A4D1N5 150 aa10.66□□□□□ -0.7
MSH5-206ENST00000423982 A8MWV9 139 aa10.66□□□□□ -0.7
MSH5-206ENST00000423982 ELANEP08246 267 aa10.66□□□□□ -0.7
MSH5-206ENST00000423982 C19orf54Q5BKX5 351 aa10.66□□□□□ -0.7
MSH5-206ENST00000423982 RNF183Q96D59 192 aa10.66□□□□□ -0.7
MSH5-206ENST00000423982 TEP1Q99973 2627 aaKnown RBP10.66□□□□□ -0.7
MSH5-206ENST00000423982 NIPBLQ6KC79 2804 aaeCLIP10.66□□□□□ -0.7
MSH5-206ENST00000423982 RHPN1-AS1Q9BWJ2 59 aa10.65□□□□□ -0.7
MSH5-206ENST00000423982 PRO1854Q9UHT4 67 aa10.65□□□□□ -0.7
MSH5-206ENST00000423982 ANK3Q12955 4377 aaKnown RBP10.65□□□□□ -0.7
MSH5-206ENST00000423982 TRAV12-2A0A075B6T6 113 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 TRAV2A0A0B4J234 112 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 C9JAW5 83 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 IGHV4-59P01825 116 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 ZNF876PQ49A33 203 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 FAM159AQ6UWV7 190 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 YAE1D1Q9NRH1 226 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 IGHV4OR15-8A0A075B7B6 117 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 A0A087WW49 117 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 FAM223BA6NKX1 122 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 FAM223AQ8IWN6 122 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 POM121L12Q8N7R1 296 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 MDFICQ9P1T7 246 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 MOB4Q9Y3A3 225 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 ADARB2-AS1A8MUL3 147 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 NDUFA4O00483 81 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 VCYO14598 125 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 NXPH4O95158 308 aa10.64□□□□□ -0.71
MSH5-206ENST00000423982 LGALS3P17931 250 aaKnown RBP10.64□□□□□ -0.71
MSH5-206ENST00000423982 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
MSH5-206ENST00000423982 MED14OSP0DP75 135 aa10.63□□□□□ -0.71
MSH5-206ENST00000423982 PF4V1P10720 104 aa10.63□□□□□ -0.71
MSH5-206ENST00000423982 APRG1Q8IVJ8 170 aa10.63□□□□□ -0.71
MSH5-206ENST00000423982 J3QLI3 93 aa10.63□□□□□ -0.71
MSH5-206ENST00000423982 PPP1R17O96001 155 aa10.63□□□□□ -0.71
MSH5-206ENST00000423982 SBSPONQ8IVN8 264 aa10.63□□□□□ -0.71
MSH5-206ENST00000423982 F8P00451 2351 aa10.62□□□□□ -0.71
MSH5-206ENST00000423982 SLC25A20O43772 301 aa10.62□□□□□ -0.71
MSH5-206ENST00000423982 BLCAPP62952 87 aa10.62□□□□□ -0.71
MSH5-206ENST00000423982 KRTAP1-1Q07627 177 aa10.62□□□□□ -0.71
MSH5-206ENST00000423982 PAPPA-AS1Q5QFB9 102 aa10.62□□□□□ -0.71
MSH5-206ENST00000423982 MUSTN1Q8IVN3 82 aa10.62□□□□□ -0.71
MSH5-206ENST00000423982 TIMM17AQ99595 171 aa10.62□□□□□ -0.71
MSH5-206ENST00000423982 JMJD1CQ15652 2540 aa10.61□□□□□ -0.71
MSH5-206ENST00000423982 TRBV20-1A0A075B6N2 111 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms