RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 NCR3O14931 201 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 ELOF1P60002 83 aaKnown RBP3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 FBXL19-AS1Q494R0 122 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 LRRK1Q38SD2 2015 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 NDUFA4O00483 81 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 MYOFQ9NZM1 2061 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 ESPL1Q14674 2120 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 C5orf42Q9H799 3197 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 ASCC3Q8N3C0 2202 aaKnown RBP3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV4-28A0A0C4DH34 117 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 K7EQD1 137 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV4-38-2P0DP08 117 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 KLKP1Q107X0 134 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 LYPD5Q6UWN5 251 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 Q86TA4 180 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 ZNF106Q9H2Y7 1883 aaKnown RBP3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 SIP14410 1827 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV3OR16-12A0A075B7B8 117 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV4-59P01825 116 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 HTN1P15515 57 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 SYCNQ0VAF6 134 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
R3HDM1-204ENST00000410054 ARID2Q68CP9 1835 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 IGLV5-39A0A0G2JS06 123 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 EIF4EBP1Q13541 118 aaPredicted RBP3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 FAM27BQ5VT28 67 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 POM121L12Q8N7R1 296 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 IGKV1-27A0A075B6S5 117 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 IGKV1D-33P01593 117 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 IGKV1-33P01594 117 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 VMO1Q7Z5L0 202 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 ZNF491Q8N8L2 437 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 TMEM263Q8WUH6 116 aaKnown RBP3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 FAM168AQ92567 244 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 PARP14Q460N5 1801 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 SPTBN1Q01082 2364 aaKnown RBP3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 IGLV7-46A0A075B6I9 117 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 H7BZZ5 65 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 PHF5AQ7RTV0 110 aaKnown RBP3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 FER1L6Q2WGJ9 1857 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 TRPM6Q9BX84 2022 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 IGKV1-9A0A0C4DH69 117 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 H3BPC8 53 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 CHCHD10Q8WYQ3 142 aaPredicted RBP3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 PSMG3-AS1Q96PY0 264 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 BPESC1Q9GZL8 116 aa3.86□□□□□ -1.79
R3HDM1-204ENST00000410054 A0A087WW49 117 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 LY6LH3BQJ8 138 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV3-30P01768 117 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 FRMD6-AS1P0C7T7 363 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV3-30-5P0DP03 117 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 Q6ZRP5 223 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 ZNF71Q9NQZ8 489 aaPredicted RBP3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 PLA2G2DQ9UNK4 145 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 LOC285556D6RIA3 1793 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 LAMA5O15230 3695 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 IGLV5-37A0A075B6J1 123 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV4-61A0A0C4DH41 118 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 IGKV4-1P06312 121 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 DHRS4-AS1Q9P1J3 65 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV3-20A0A0C4DH32 117 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 Q75L30 129 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 PCNX3Q9H6A9 2034 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 ASXL3Q9C0F0 2248 aa3.85□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV3-11P01762 117 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 LINC00310P59036 64 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 CSRP2Q16527 193 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 Q1T7F1 81 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 GDF5OSQ5U4N7 250 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 PROK2Q9HC23 129 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 DOCK6Q96HP0 2047 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 DOCK5Q9H7D0 1870 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 C11orf71Q6IPW1 123 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 LEAP2Q969E1 77 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 LINC00846Q9NV44 126 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 LHFPL6Q9Y693 200 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 BRWD3Q6RI45 1802 aa3.84□□□□□ -1.79
R3HDM1-204ENST00000410054 DNAJC9-AS1A6NH13 148 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 OXTP01178 125 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 SSBP3-AS1Q7Z2R9 100 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 ZNF295-AS1Q8N0V1 137 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 C14orf178Q8N769 122 aaPredicted RBP3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 FAM167A-AS1Q96KT0 104 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 RLFQ13129 1914 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 A0A1B0GU69 56 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 ETDCA0A1B0GVM5 59 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 SPATA3Q8NHX4 192 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 DEFB126Q9BYW3 111 aa3.84□□□□□ -1.8
R3HDM1-204ENST00000410054 PTPRZ1P23471 2315 aaPredicted RBP3.83□□□□□ -1.8
R3HDM1-204ENST00000410054 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.83□□□□□ -1.85e-11■■■■■ 97.2
R3HDM1-204ENST00000410054 IGHV3OR16-10A0A075B7F0 116 aa3.83□□□□□ -1.8
R3HDM1-204ENST00000410054 TRBV6-1A0A0K0K1D8 114 aa3.83□□□□□ -1.8
R3HDM1-204ENST00000410054 E7EQL1 145 aa3.83□□□□□ -1.8
R3HDM1-204ENST00000410054 RITA1Q96K30 269 aa3.83□□□□□ -1.8
R3HDM1-204ENST00000410054 CACNA1BQ00975 2339 aa3.83□□□□□ -1.8
R3HDM1-204ENST00000410054 ABCA1O95477 2261 aa3.83□□□□□ -1.8
R3HDM1-204ENST00000410054 DOCK4Q8N1I0 1966 aa3.83□□□□□ -1.8
R3HDM1-204ENST00000410054 COL4A5P29400 1685 aa3.83□□□□□ -1.8
R3HDM1-204ENST00000410054 IGKV1-12A0A0C4DH73 117 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms