RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 CBLN4Q9NTU7 201 aa-1.24□□□□□ -2.61
MIR548I3-201ENST00000408378 SCN3BQ9NY72 215 aa-1.24□□□□□ -2.61
MIR548I3-201ENST00000408378 ERG28Q9UKR5 140 aa-1.24□□□□□ -2.61
MIR548I3-201ENST00000408378 LAMTOR2Q9Y2Q5 125 aa-1.24□□□□□ -2.61
MIR548I3-201ENST00000408378 CASZ1Q86V15 1759 aa-1.24□□□□□ -2.61
MIR548I3-201ENST00000408378 TECPR2O15040 1411 aa-1.24□□□□□ -2.61
MIR548I3-201ENST00000408378 IQSEC2Q5JU85 1478 aa-1.24□□□□□ -2.61
MIR548I3-201ENST00000408378 WDR97A6NE52 1622 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 TRBV7-6A0A0J9YX20 115 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 TRBV6-1A0A0K0K1D8 114 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 UQCRQO14949 82 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 CTXN2P0C2S0 81 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 S100A3P33764 101 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 EDDM3BP56851 147 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 MRPS15P82914 257 aaKnown RBP-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 PLGLB1Q02325 96 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 FAM24BQ8N5W8 94 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 DYDC1Q8WWB3 177 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 TSC2P49815 1807 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 MYH3P11055 1940 aa-1.25□□□□□ -2.61
MIR548I3-201ENST00000408378 DNAH1Q9P2D7 4330 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 DNAH11Q96DT5 4516 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 M0QZK8 103 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 NIPSNAP2O75323 286 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 SLC25A5P05141 298 aaKnown RBP-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 COX6B1P14854 86 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 SPCS2Q15005 226 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 HSD17B12Q53GQ0 312 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 DHRS4L2Q6PKH6 230 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 STX19Q8N4C7 294 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 DYNLRB2Q8TF09 96 aa-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 METTL1Q9UBP6 276 aaKnown RBP-1.26□□□□□ -2.61
MIR548I3-201ENST00000408378 TRAV12-3A0A0B4J271 114 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 J3KT08 172 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 RPL22P35268 128 aaKnown RBP-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 GNG3P63215 75 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 PIGYQ3MUY2 71 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 CEP19Q96LK0 163 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 CFAP53Q96M91 514 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 NPVFQ9HCQ7 196 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 UFC1Q9Y3C8 167 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 CCDC171Q6TFL3 1326 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 ZNF609O15014 1411 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 APOBP04114 4563 aaKnown RBP-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 SIPA1L3O60292 1781 aaPredicted RBP-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 PARP14Q460N5 1801 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 ARFGEF1Q9Y6D6 1849 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 SACSQ9NZJ4 4579 aa-1.27□□□□□ -2.61
MIR548I3-201ENST00000408378 FER1L6Q2WGJ9 1857 aa-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 KDM3BQ7LBC6 1761 aa-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 NRXN2Q9P2S2 1712 aa-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 BICRAQ9NZM4 1560 aa-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 PTPRMP28827 1452 aa-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 IBTKQ9P2D0 1353 aaPredicted RBP-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 HIST1H1BP16401 226 aaKnown RBP-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 TMED2Q15363 201 aa-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 CFAP126Q5VTH2 177 aa-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 SDF2Q99470 211 aa-1.28□□□□□ -2.61
MIR548I3-201ENST00000408378 COL6A5A8TX70 2615 aa-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 RIF1Q5UIP0 2472 aaKnown RBP-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 WDR7Q9Y4E6 1490 aa-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 VPS13BQ7Z7G8 4022 aa-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 CCDC179H3BU77 68 aa-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 HRCT1Q6UXD1 115 aa-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 BAGE3Q86Y29 109 aa-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 SMIM20Q8N5G0 67 aa-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 UTP20O75691 2785 aaKnown RBP-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 ITPR1Q14643 2758 aa-1.29□□□□□ -2.62
MIR548I3-201ENST00000408378 ERCC6L2Q5T890 1561 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 A2MP01023 1474 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 TCRAP04437 139 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 TCTAP57738 103 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 REEP5Q00765 189 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 DCUN1D2Q6PH85 259 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 SNX29P2Q8IUI4 249 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 ATP6V0E2Q8NHE4 81 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 CCDC32Q9BV29 185 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 FXYD6Q9H0Q3 95 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 SLC35B3Q9H1N7 401 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 MED31Q9Y3C7 131 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 LRP6O75581 1613 aa-1.3□□□□□ -2.62
MIR548I3-201ENST00000408378 NBASA2RRP1 2371 aa-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 FAM92AA1XBS5 289 aa-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 CLPSL1A2RUU4 121 aa-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 SMIM6P0DI80 62 aa-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 HSD11B1P28845 292 aa-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 MRPS25P82663 173 aaKnown RBP-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 ATP11AUNQ6ZP68 121 aa-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 NOP16Q9Y3C1 178 aaKnown RBP-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 DNAJC15Q9Y5T4 150 aa-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 CEP295Q9C0D2 2601 aa-1.31□□□□□ -2.62
MIR548I3-201ENST00000408378 IFT172Q9UG01 1749 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 NBEAQ8NFP9 2946 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 MTORP42345 2549 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 CAMSAP1Q5T5Y3 1602 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 TNFP01375 233 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 PSPHP78330 225 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 DEFB135Q30KP9 77 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 TMEM91Q6ZNR0 172 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 DEFB105AQ8NG35 78 aa-1.32□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms