RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
NUP50-203ENST00000407019 DLX4Q92988 240 aaPredicted RBP12.37□□□□□ -0.43
NUP50-203ENST00000407019 ZFYVE26Q68DK2 2539 aa12.37□□□□□ -0.43
NUP50-203ENST00000407019 I3L3M4 83 aa12.36□□□□□ -0.43
NUP50-203ENST00000407019 C12orf74Q32Q52 190 aa12.36□□□□□ -0.43
NUP50-203ENST00000407019 MAP6D1Q9H9H5 199 aa12.36□□□□□ -0.43
NUP50-203ENST00000407019 LRRK2Q5S007 2527 aa12.36□□□□□ -0.43
NUP50-203ENST00000407019 EDA2RQ9HAV5 297 aa12.35□□□□□ -0.43
NUP50-203ENST00000407019 TEX29Q8N6K0 151 aa12.34□□□□□ -0.43
NUP50-203ENST00000407019 SPAG8Q99932 426 aaPredicted RBP12.34□□□□□ -0.43
NUP50-203ENST00000407019 P0DMU3 169 aa12.34□□□□□ -0.43
NUP50-203ENST00000407019 FAM231AP0DMU4 169 aa12.34□□□□□ -0.43
NUP50-203ENST00000407019 FAM231CP0DMU5 169 aa12.34□□□□□ -0.43
NUP50-203ENST00000407019 ZNF415Q09FC8 603 aa12.34□□□□□ -0.43
NUP50-203ENST00000407019 RNF151Q2KHN1 245 aa12.34□□□□□ -0.43
NUP50-203ENST00000407019 SCGB1D4Q6XE38 83 aa12.34□□□□□ -0.43
NUP50-203ENST00000407019 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
NUP50-203ENST00000407019 IGLL5B9A064 214 aa12.33□□□□□ -0.44
NUP50-203ENST00000407019 DEFB114Q30KQ6 69 aa12.33□□□□□ -0.44
NUP50-203ENST00000407019 Q6ZSV7 163 aa12.33□□□□□ -0.44
NUP50-203ENST00000407019 M0R2P5 195 aa12.33□□□□□ -0.44
NUP50-203ENST00000407019 PTPN13Q12923 2485 aa12.33□□□□□ -0.44
NUP50-203ENST00000407019 TMEM170BQ5T4T1 132 aa12.33□□□□□ -0.44
NUP50-203ENST00000407019 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
NUP50-203ENST00000407019 PLEKHB2Q96CS7 222 aa12.33□□□□□ -0.44
NUP50-203ENST00000407019 IGHV3-73A0A0B4J1V6 119 aa12.32□□□□□ -0.44
NUP50-203ENST00000407019 A0A1B0GWB2 263 aa12.32□□□□□ -0.44
NUP50-203ENST00000407019 A8MWV9 139 aa12.32□□□□□ -0.44
NUP50-203ENST00000407019 RAX2Q96IS3 184 aa12.32□□□□□ -0.44
NUP50-203ENST00000407019 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
NUP50-203ENST00000407019 NAV2Q8IVL1 2488 aa12.32□□□□□ -0.44
NUP50-203ENST00000407019 DNAJC9-AS1A6NH13 148 aa12.31□□□□□ -0.44
NUP50-203ENST00000407019 K7ERU9 68 aa12.31□□□□□ -0.44
NUP50-203ENST00000407019 HIST2H2BDQ6DRA6 164 aa12.31□□□□□ -0.44
NUP50-203ENST00000407019 NFE4Q86UQ8 179 aa12.31□□□□□ -0.44
NUP50-203ENST00000407019 PIK3CD-AS1Q5SR53 167 aa12.31□□□□□ -0.44
NUP50-203ENST00000407019 WFDC11Q8NEX6 87 aa12.31□□□□□ -0.44
NUP50-203ENST00000407019 OPRPNQ99935 248 aaPredicted RBP12.31□□□□□ -0.44
NUP50-203ENST00000407019 MXRA5Q9NR99 2828 aa12.31□□□□□ -0.44
NUP50-203ENST00000407019 PRM2P04554 102 aa12.3□□□□□ -0.44
NUP50-203ENST00000407019 PTH2Q96A98 100 aa12.3□□□□□ -0.44
NUP50-203ENST00000407019 PROK1P58294 105 aa12.3□□□□□ -0.44
NUP50-203ENST00000407019 LINC01587Q99440 93 aa12.3□□□□□ -0.44
NUP50-203ENST00000407019 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
NUP50-203ENST00000407019 CREBBPQ92793 2442 aa12.29□□□□□ -0.44
NUP50-203ENST00000407019 TMEM238LA0A1B0GVL6 79 aa12.29□□□□□ -0.44
NUP50-203ENST00000407019 A6NJY4 79 aa12.29□□□□□ -0.44
NUP50-203ENST00000407019 INSP01308 110 aa12.29□□□□□ -0.44
NUP50-203ENST00000407019 SRSF9Q13242 221 aaKnown RBP eCLIP12.29□□□□□ -0.44
NUP50-203ENST00000407019 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
NUP50-203ENST00000407019 RRN3P1Q2M238 152 aa12.28□□□□□ -0.44
NUP50-203ENST00000407019 TNFRSF18Q9Y5U5 241 aa12.28□□□□□ -0.44
NUP50-203ENST00000407019 IGLV4-3A0A075B6K6 122 aa12.28□□□□□ -0.44
NUP50-203ENST00000407019 SORL1Q92673 2214 aa12.27□□□□□ -0.44
NUP50-203ENST00000407019 CENPEQ02224 2701 aa12.27□□□□□ -0.44
NUP50-203ENST00000407019 A0A0J9YY99 117 aa12.27□□□□□ -0.45
NUP50-203ENST00000407019 SAP30O75446 220 aa12.27□□□□□ -0.45
NUP50-203ENST00000407019 VCX2Q9H322 139 aa12.27□□□□□ -0.45
NUP50-203ENST00000407019 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 J3QQQ9 107 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
NUP50-203ENST00000407019 C11orf72Q8NBR9 251 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 VPS25Q9BRG1 176 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 SPXQ9BT56 116 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 ABCA12Q86UK0 2595 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 RHODO00212 210 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 CD28P10747 220 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 CFAP126Q5VTH2 177 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 CLUHP3Q96NS8 147 aa12.26□□□□□ -0.45
NUP50-203ENST00000407019 A0A1W2PRX2 142 aa12.25□□□□□ -0.45
NUP50-203ENST00000407019 TMEM223A0PJW6 202 aa12.25□□□□□ -0.45
NUP50-203ENST00000407019 FHL3Q13643 280 aa12.25□□□□□ -0.45
NUP50-203ENST00000407019 SPANXB1Q9NS25 103 aaPredicted RBP12.25□□□□□ -0.45
NUP50-203ENST00000407019 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
NUP50-203ENST00000407019 LEPROTO15243 131 aa12.25□□□□□ -0.45
NUP50-203ENST00000407019 ZNF22P17026 224 aaPredicted RBP12.25□□□□□ -0.45
NUP50-203ENST00000407019 ODF3L2Q3SX64 289 aa12.25□□□□□ -0.45
NUP50-203ENST00000407019 C11orf44Q8N8P7 122 aa12.25□□□□□ -0.45
NUP50-203ENST00000407019 ESM1Q9NQ30 184 aa12.25□□□□□ -0.45
NUP50-203ENST00000407019 TEX15Q9BXT5 2789 aa12.24□□□□□ -0.45
NUP50-203ENST00000407019 UBE2D1P51668 147 aa12.24□□□□□ -0.45
NUP50-203ENST00000407019 Q6ZSN1 163 aa12.24□□□□□ -0.45
NUP50-203ENST00000407019 AMELXQ99217 191 aa12.24□□□□□ -0.45
NUP50-203ENST00000407019 MRPL16Q9NX20 251 aaKnown RBP12.24□□□□□ -0.45
NUP50-203ENST00000407019 A0A0J9YXV3 536 aa12.23□□□□□ -0.45
NUP50-203ENST00000407019 CCL24O00175 119 aa12.23□□□□□ -0.45
NUP50-203ENST00000407019 BEAN1Q3B7T3 259 aa12.23□□□□□ -0.45
NUP50-203ENST00000407019 STHQ8IWL8 128 aa12.23□□□□□ -0.45
NUP50-203ENST00000407019 PGPEP1Q9NXJ5 209 aa12.23□□□□□ -0.45
NUP50-203ENST00000407019 PCP4P48539 62 aa12.22□□□□□ -0.45
NUP50-203ENST00000407019 SLC25A29Q8N8R3 303 aa12.22□□□□□ -0.45
NUP50-203ENST00000407019 XCL2Q9UBD3 114 aa12.22□□□□□ -0.45
NUP50-203ENST00000407019 IGHV3-53P01767 116 aa12.22□□□□□ -0.45
NUP50-203ENST00000407019 CRYBA4P53673 196 aa12.22□□□□□ -0.45
NUP50-203ENST00000407019 DNAJC30Q96LL9 226 aa12.22□□□□□ -0.45
NUP50-203ENST00000407019 Q9UF83 564 aa12.22□□□□□ -0.45
NUP50-203ENST00000407019 RS1O15537 224 aa12.21□□□□□ -0.45
NUP50-203ENST00000407019 HIST2H2BCQ6DN03 193 aa12.21□□□□□ -0.45
NUP50-203ENST00000407019 G3V4G9 280 aa12.2□□□□□ -0.46
NUP50-203ENST00000407019 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms