RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 DEFB112Q30KQ8 113 aa11.66□□□□□ -0.54
TOM1-203ENST00000404284 CFAP46Q8IYW2 2715 aa11.66□□□□□ -0.54
TOM1-203ENST00000404284 IGLV4-69A0A075B6H9 119 aa11.66□□□□□ -0.54
TOM1-203ENST00000404284 A8MWV9 139 aa11.66□□□□□ -0.54
TOM1-203ENST00000404284 COX6B1P14854 86 aa11.66□□□□□ -0.54
TOM1-203ENST00000404284 DEFB104AQ8WTQ1 72 aa11.66□□□□□ -0.54
TOM1-203ENST00000404284 C9orf85Q96MD7 179 aa11.66□□□□□ -0.54
TOM1-203ENST00000404284 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
TOM1-203ENST00000404284 MAP1AP78559 2803 aaPredicted RBP11.65□□□□□ -0.54
TOM1-203ENST00000404284 IGHV3-16A0A0C4DH30 117 aa11.65□□□□□ -0.54
TOM1-203ENST00000404284 A0A0J9YX75 114 aa11.65□□□□□ -0.54
TOM1-203ENST00000404284 NRGNQ92686 78 aa11.65□□□□□ -0.54
TOM1-203ENST00000404284 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
TOM1-203ENST00000404284 DOPEY1Q5JWR5 2465 aa11.65□□□□□ -0.55
TOM1-203ENST00000404284 C11orf86A6NJI1 115 aa11.64□□□□□ -0.55
TOM1-203ENST00000404284 LGALS9O00182 355 aa11.64□□□□□ -0.55
TOM1-203ENST00000404284 TCL1BO95988 128 aa11.64□□□□□ -0.55
TOM1-203ENST00000404284 RPL39P62891 51 aaKnown RBP11.64□□□□□ -0.55
TOM1-203ENST00000404284 TRAV12-2A0A075B6T6 113 aa11.64□□□□□ -0.55
TOM1-203ENST00000404284 SDHAF1A6NFY7 115 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 ZNF815PA8K554 130 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 K7EQG2 157 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 VCYO14598 125 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 C3orf56Q8N813 242 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 MDFICQ9P1T7 246 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 VPREB3Q9UKI3 123 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 CRYBG3Q68DQ2 2970 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 TRBV27A0A0K0K1C4 114 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 F5H697 171 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 PLEKHB2Q96CS7 222 aa11.63□□□□□ -0.55
TOM1-203ENST00000404284 TRBV6-5A0A0K0K1A5 114 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 IGKV3-20P01619 116 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 MEIG1Q5JSS6 88 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 TMEM89A2RUT3 159 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 EMP1P54849 157 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 UBE2D3P61077 147 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 UBE2D2P62837 147 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 PMVKQ15126 192 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 FAM74A4Q5TZK3 123 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 Q8N1Y9 231 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 TIMM17AQ99595 171 aa11.62□□□□□ -0.55
TOM1-203ENST00000404284 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
TOM1-203ENST00000404284 USP9XQ93008 2570 aaPredicted RBP11.61□□□□□ -0.55
TOM1-203ENST00000404284 M0QXV9 152 aa11.61□□□□□ -0.55
TOM1-203ENST00000404284 TMEM141Q96I45 108 aa11.61□□□□□ -0.55
TOM1-203ENST00000404284 A0A096LNT2 108 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 DSCR9P59020 149 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 KLHL30-AS1Q8NEE0 82 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 FLNCQ14315 2725 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 CSMD2Q7Z408 3487 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 M0QY20 66 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 SYNJ2BPP57105 145 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 SRSF9Q13242 221 aaKnown RBP eCLIP11.6□□□□□ -0.55
TOM1-203ENST00000404284 SPINK13Q1W4C9 94 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 PAPPA-AS1Q5QFB9 102 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 LINC01356Q8N9X3 169 aa11.6□□□□□ -0.55
TOM1-203ENST00000404284 IGHV1OR15-1A0A075B7D0 117 aa11.59□□□□□ -0.55
TOM1-203ENST00000404284 SCGB1C2P0DMR2 95 aa11.59□□□□□ -0.55
TOM1-203ENST00000404284 SCGB1D4Q6XE38 83 aa11.59□□□□□ -0.55
TOM1-203ENST00000404284 UBE2D1P51668 147 aa11.58□□□□□ -0.55
TOM1-203ENST00000404284 ZNF56Q15929 161 aa11.58□□□□□ -0.55
TOM1-203ENST00000404284 SBSPONQ8IVN8 264 aa11.58□□□□□ -0.55
TOM1-203ENST00000404284 ZNF876PQ49A33 203 aa11.58□□□□□ -0.56
TOM1-203ENST00000404284 LYRM7Q5U5X0 104 aa11.58□□□□□ -0.56
TOM1-203ENST00000404284 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
TOM1-203ENST00000404284 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
TOM1-203ENST00000404284 TSPEAR-AS2P59090 65 aa11.57□□□□□ -0.56
TOM1-203ENST00000404284 HERVK_113P61574 105 aa11.57□□□□□ -0.56
TOM1-203ENST00000404284 NSUN5P1Q3KNT7 163 aa11.57□□□□□ -0.56
TOM1-203ENST00000404284 A0A0J9YY99 117 aa11.56□□□□□ -0.56
TOM1-203ENST00000404284 DUX5Q96PT3 197 aa11.56□□□□□ -0.56
TOM1-203ENST00000404284 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
TOM1-203ENST00000404284 SLC25A20O43772 301 aa11.56□□□□□ -0.56
TOM1-203ENST00000404284 HOXD3P31249 432 aaPredicted RBP11.56□□□□□ -0.56
TOM1-203ENST00000404284 RNF152Q8N8N0 203 aa11.56□□□□□ -0.56
TOM1-203ENST00000404284 DOPEY2Q9Y3R5 2298 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 J3QLI3 93 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 RHOHQ15669 191 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 TRPT1Q86TN4 253 aaKnown RBP11.55□□□□□ -0.56
TOM1-203ENST00000404284 ZNF702PQ9H963 129 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 C9JAW5 83 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 ELANEP08246 267 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 P0DMU3 169 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 FAM231AP0DMU4 169 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 FAM231CP0DMU5 169 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 NDUFA11Q86Y39 141 aa11.55□□□□□ -0.56
TOM1-203ENST00000404284 IGSF10Q6WRI0 2623 aa11.54□□□□□ -0.56
TOM1-203ENST00000404284 SORL1Q92673 2214 aa11.54□□□□□ -0.56
TOM1-203ENST00000404284 AMELXQ99217 191 aa11.54□□□□□ -0.56
TOM1-203ENST00000404284 OPRPNQ99935 248 aaPredicted RBP11.54□□□□□ -0.56
TOM1-203ENST00000404284 RBMY1A1P0DJD3 496 aaKnown RBP11.54□□□□□ -0.56
TOM1-203ENST00000404284 RBMY1CP0DJD4 496 aa11.54□□□□□ -0.56
TOM1-203ENST00000404284 RBMY1FQ15415 496 aaKnown RBP11.54□□□□□ -0.56
TOM1-203ENST00000404284 C15orf53Q8NAA6 179 aa11.54□□□□□ -0.56
TOM1-203ENST00000404284 UTP20O75691 2785 aaKnown RBP11.54□□□□□ -0.56
TOM1-203ENST00000404284 UBE2E2Q96LR5 201 aa11.53□□□□□ -0.56
TOM1-203ENST00000404284 ACACBO00763 2458 aa11.53□□□□□ -0.56
TOM1-203ENST00000404284 ZANQ9Y493 2812 aa11.53□□□□□ -0.56
TOM1-203ENST00000404284 FSHBP01225 129 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms