RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TRBV6-5A0A0K0K1A5 114 aa19.44■□□□□ 0.7
CPNE1-203ENST00000397442 H7C1H1 209 aa19.44■□□□□ 0.7
CPNE1-203ENST00000397442 HOXA5P20719 270 aa19.44■□□□□ 0.7
CPNE1-203ENST00000397442 SUMO2P61956 95 aaKnown RBP19.44■□□□□ 0.7
CPNE1-203ENST00000397442 B9D2Q9BPU9 175 aa19.44■□□□□ 0.7
CPNE1-203ENST00000397442 C20orf78Q9BR46 151 aa19.44■□□□□ 0.7
CPNE1-203ENST00000397442 NIT2Q9NQR4 276 aa19.44■□□□□ 0.7
CPNE1-203ENST00000397442 DAD1P61803 113 aa19.43■□□□□ 0.7
CPNE1-203ENST00000397442 IGLV2-18A0A075B6J9 118 aa19.43■□□□□ 0.7
CPNE1-203ENST00000397442 A0A0J9YWU9 116 aa19.43■□□□□ 0.7
CPNE1-203ENST00000397442 ESDP10768 282 aa19.42■□□□□ 0.7
CPNE1-203ENST00000397442 SLC25A29Q8N8R3 303 aa19.42■□□□□ 0.7
CPNE1-203ENST00000397442 PRSS3P2Q8NHM4 247 aa19.42■□□□□ 0.7
CPNE1-203ENST00000397442 TEX48A0A1B0GUV7 120 aa19.41■□□□□ 0.7
CPNE1-203ENST00000397442 LINC00614P0C842 121 aa19.41■□□□□ 0.7
CPNE1-203ENST00000397442 MEGF8Q7Z7M0 2845 aa19.41■□□□□ 0.7
CPNE1-203ENST00000397442 ST20Q9HBF5 79 aa19.41■□□□□ 0.7
CPNE1-203ENST00000397442 HUWE1Q7Z6Z7 4374 aaKnown RBP19.41■□□□□ 0.7
CPNE1-203ENST00000397442 DEFA6Q01524 100 aa19.4■□□□□ 0.7
CPNE1-203ENST00000397442 RNASEKQ6P5S7 137 aaKnown RBP19.4■□□□□ 0.7
CPNE1-203ENST00000397442 HIST3H2BBQ8N257 126 aa19.4■□□□□ 0.7
CPNE1-203ENST00000397442 SMIM2Q9BVW6 85 aa19.4■□□□□ 0.7
CPNE1-203ENST00000397442 TRGV4A0A0C4DH28 118 aa19.4■□□□□ 0.7
CPNE1-203ENST00000397442 POLR2KP53803 58 aaKnown RBP19.4■□□□□ 0.7
CPNE1-203ENST00000397442 NEXN-AS1Q8NBZ9 246 aa19.4■□□□□ 0.7
CPNE1-203ENST00000397442 K7EQD1 137 aa19.39■□□□□ 0.69
CPNE1-203ENST00000397442 C12orf74Q32Q52 190 aa19.39■□□□□ 0.69
CPNE1-203ENST00000397442 PDZD11Q5EBL8 140 aa19.39■□□□□ 0.69
CPNE1-203ENST00000397442 Q8N8P6 123 aa19.39■□□□□ 0.69
CPNE1-203ENST00000397442 TMEM70Q9BUB7 260 aa19.39■□□□□ 0.69
CPNE1-203ENST00000397442 ZMAT4Q9H898 229 aa19.39■□□□□ 0.69
CPNE1-203ENST00000397442 TRBV6-4A0A1B0GX49 114 aa19.38■□□□□ 0.69
CPNE1-203ENST00000397442 RPL32P62910 135 aaKnown RBP19.38■□□□□ 0.69
CPNE1-203ENST00000397442 CHCHD1Q96BP2 118 aaKnown RBP19.38■□□□□ 0.69
CPNE1-203ENST00000397442 NXT2Q9NPJ8 142 aaKnown RBP19.38■□□□□ 0.69
CPNE1-203ENST00000397442 SDHAF1A6NFY7 115 aa19.37■□□□□ 0.69
CPNE1-203ENST00000397442 LINC01546A6NGU7 62 aa19.37■□□□□ 0.69
CPNE1-203ENST00000397442 IFITM10A6NMD0 228 aa19.37■□□□□ 0.69
CPNE1-203ENST00000397442 PMCHP20382 165 aa19.36■□□□□ 0.69
CPNE1-203ENST00000397442 FA2HQ7L5A8 372 aa19.36■□□□□ 0.69
CPNE1-203ENST00000397442 TRBV10-1A0A0K0K1A3 114 aa19.36■□□□□ 0.69
CPNE1-203ENST00000397442 AP5S1Q9NUS5 200 aa19.36■□□□□ 0.69
CPNE1-203ENST00000397442 DNAH9Q9NYC9 4486 aa19.36■□□□□ 0.69
CPNE1-203ENST00000397442 ATP5G1P05496 136 aa19.35■□□□□ 0.69
CPNE1-203ENST00000397442 NEGR1Q7Z3B1 354 aa19.35■□□□□ 0.69
CPNE1-203ENST00000397442 DNAJC30Q96LL9 226 aa19.35■□□□□ 0.69
CPNE1-203ENST00000397442 HHLA3Q9XRX5 114 aa19.35■□□□□ 0.69
CPNE1-203ENST00000397442 COL7A1Q02388 2944 aa19.35■□□□□ 0.69
CPNE1-203ENST00000397442 TRBV27A0A0K0K1C4 114 aa19.34■□□□□ 0.69
CPNE1-203ENST00000397442 TNFRSF18Q9Y5U5 241 aa19.33■□□□□ 0.69
CPNE1-203ENST00000397442 HSBP1O75506 76 aa19.33■□□□□ 0.68
CPNE1-203ENST00000397442 FAM19A2Q8N3H0 131 aa19.33■□□□□ 0.68
CPNE1-203ENST00000397442 LOC100131303A0A0U1RQF7 123 aa19.32■□□□□ 0.68
CPNE1-203ENST00000397442 VCYO14598 125 aa19.32■□□□□ 0.68
CPNE1-203ENST00000397442 CRYBA4P53673 196 aa19.32■□□□□ 0.68
CPNE1-203ENST00000397442 RHOHQ15669 191 aa19.32■□□□□ 0.68
CPNE1-203ENST00000397442 LOC105371267A0A1B0GV96 52 aa19.31■□□□□ 0.68
CPNE1-203ENST00000397442 TCAPO15273 167 aa19.31■□□□□ 0.68
CPNE1-203ENST00000397442 PMCHL1Q16048 86 aa19.31■□□□□ 0.68
CPNE1-203ENST00000397442 PRO0255Q9UI72 69 aa19.31■□□□□ 0.68
CPNE1-203ENST00000397442 TRBV7-3A0A075B6L6 115 aa19.3■□□□□ 0.68
CPNE1-203ENST00000397442 ZNRF2Q8NHG8 242 aa19.3■□□□□ 0.68
CPNE1-203ENST00000397442 HIST1H2BLQ99880 126 aa19.3■□□□□ 0.68
CPNE1-203ENST00000397442 IGHV1-24A0A0C4DH33 117 aa19.3■□□□□ 0.68
CPNE1-203ENST00000397442 C11orf45Q8TAV5 145 aa19.3■□□□□ 0.68
CPNE1-203ENST00000397442 A0A096LNJ9 63 aa19.29■□□□□ 0.68
CPNE1-203ENST00000397442 Q6ZTC4 211 aa19.29■□□□□ 0.68
CPNE1-203ENST00000397442 DEFB104AQ8WTQ1 72 aa19.29■□□□□ 0.68
CPNE1-203ENST00000397442 PRADC1Q9BSG0 188 aa19.29■□□□□ 0.68
CPNE1-203ENST00000397442 S100A2P29034 98 aa19.28■□□□□ 0.68
CPNE1-203ENST00000397442 NANOS2P60321 138 aaKnown RBP19.28■□□□□ 0.68
CPNE1-203ENST00000397442 RPL36AP83881 106 aaKnown RBP19.28■□□□□ 0.68
CPNE1-203ENST00000397442 RPL36ALQ969Q0 106 aaKnown RBP19.28■□□□□ 0.68
CPNE1-203ENST00000397442 GAGE12JA6NER3 117 aa19.27■□□□□ 0.68
CPNE1-203ENST00000397442 F5H768 121 aa19.27■□□□□ 0.68
CPNE1-203ENST00000397442 AMTP48728 403 aa19.27■□□□□ 0.68
CPNE1-203ENST00000397442 GAGE1Q13065 139 aa19.27■□□□□ 0.68
CPNE1-203ENST00000397442 GAGE4Q13068 117 aa19.27■□□□□ 0.68
CPNE1-203ENST00000397442 GAGE5Q13069 117 aa19.27■□□□□ 0.68
CPNE1-203ENST00000397442 GAGE13Q4V321 117 aa19.27■□□□□ 0.68
CPNE1-203ENST00000397442 VSIG2Q96IQ7 327 aa19.27■□□□□ 0.68
CPNE1-203ENST00000397442 PRKDCP78527 4128 aaKnown RBP19.27■□□□□ 0.68
CPNE1-203ENST00000397442 I3L3M4 83 aa19.27■□□□□ 0.67
CPNE1-203ENST00000397442 LINC00694P0DN24 101 aa19.27■□□□□ 0.67
CPNE1-203ENST00000397442 HTN3P15516 51 aa19.27■□□□□ 0.67
CPNE1-203ENST00000397442 UBE2D3P61077 147 aa19.27■□□□□ 0.67
CPNE1-203ENST00000397442 UBE2D2P62837 147 aa19.27■□□□□ 0.67
CPNE1-203ENST00000397442 LAGE3Q14657 143 aa19.27■□□□□ 0.67
CPNE1-203ENST00000397442 K7EMI3 77 aa19.26■□□□□ 0.67
CPNE1-203ENST00000397442 FABP4P15090 132 aa19.26■□□□□ 0.67
CPNE1-203ENST00000397442 KIR2DL4Q99706 377 aa19.26■□□□□ 0.67
CPNE1-203ENST00000397442 TSHBP01222 138 aa19.25■□□□□ 0.67
CPNE1-203ENST00000397442 TMEM18Q96B42 140 aa19.25■□□□□ 0.67
CPNE1-203ENST00000397442 NHLRC4P0CG21 123 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-203ENST00000397442 PACRGQ96M98 296 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-203ENST00000397442 IGHV3-38A0A0C4DH36 116 aa19.24■□□□□ 0.67
CPNE1-203ENST00000397442 PAX4O43316 350 aa19.24■□□□□ 0.67
CPNE1-203ENST00000397442 PHLDA1Q8WV24 401 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-203ENST00000397442 TRAV26-1A0A087WT03 109 aa19.23■□□□□ 0.67
CPNE1-203ENST00000397442 GYPEP15421 78 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms