RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 MYO9AB2RTY4 2548 aa13.6□□□□□ -0.23
IFFO1-204ENST00000396840 HIST2H2BDQ6DRA6 164 aa13.59□□□□□ -0.23
IFFO1-204ENST00000396840 K7EQG2 157 aa13.59□□□□□ -0.23
IFFO1-204ENST00000396840 P0DMU3 169 aa13.59□□□□□ -0.23
IFFO1-204ENST00000396840 FAM231AP0DMU4 169 aa13.59□□□□□ -0.23
IFFO1-204ENST00000396840 FAM231CP0DMU5 169 aa13.59□□□□□ -0.23
IFFO1-204ENST00000396840 UBE2D1P51668 147 aa13.59□□□□□ -0.23
IFFO1-204ENST00000396840 TIMM17AQ99595 171 aa13.59□□□□□ -0.23
IFFO1-204ENST00000396840 GAGE12HA6NDE8 117 aa13.58□□□□□ -0.23
IFFO1-204ENST00000396840 DEFB136Q30KP8 78 aa13.58□□□□□ -0.23
IFFO1-204ENST00000396840 PROK1P58294 105 aa13.58□□□□□ -0.24
IFFO1-204ENST00000396840 PAPPA-AS1Q5QFB9 102 aa13.58□□□□□ -0.24
IFFO1-204ENST00000396840 ZNF580Q9UK33 172 aa13.58□□□□□ -0.24
IFFO1-204ENST00000396840 KNCNA6PVL3 124 aa13.57□□□□□ -0.24
IFFO1-204ENST00000396840 J3QQQ9 107 aa13.57□□□□□ -0.24
IFFO1-204ENST00000396840 RPL32P62910 135 aaKnown RBP13.57□□□□□ -0.24
IFFO1-204ENST00000396840 PTH2Q96A98 100 aa13.57□□□□□ -0.24
IFFO1-204ENST00000396840 LGALS3P17931 250 aaKnown RBP13.57□□□□□ -0.24
IFFO1-204ENST00000396840 NDUFA11Q86Y39 141 aa13.57□□□□□ -0.24
IFFO1-204ENST00000396840 DLX4Q92988 240 aaPredicted RBP13.57□□□□□ -0.24
IFFO1-204ENST00000396840 LRRK2Q5S007 2527 aa13.56□□□□□ -0.24
IFFO1-204ENST00000396840 ABCA12Q86UK0 2595 aa13.56□□□□□ -0.24
IFFO1-204ENST00000396840 J3QR89 54 aa13.56□□□□□ -0.24
IFFO1-204ENST00000396840 HOXD3P31249 432 aaPredicted RBP13.56□□□□□ -0.24
IFFO1-204ENST00000396840 RNASE13Q5GAN3 156 aaKnown RBP13.56□□□□□ -0.24
IFFO1-204ENST00000396840 TLN2Q9Y4G6 2542 aa13.56□□□□□ -0.24
IFFO1-204ENST00000396840 TEX15Q9BXT5 2789 aa13.56□□□□□ -0.24
IFFO1-204ENST00000396840 RBMY1A1P0DJD3 496 aaKnown RBP13.56□□□□□ -0.24
IFFO1-204ENST00000396840 RBMY1CP0DJD4 496 aa13.56□□□□□ -0.24
IFFO1-204ENST00000396840 SMCPP49901 116 aaPredicted RBP13.56□□□□□ -0.24
IFFO1-204ENST00000396840 RBMY1FQ15415 496 aaKnown RBP13.56□□□□□ -0.24
IFFO1-204ENST00000396840 CEMP1Q6PRD7 247 aaPredicted RBP13.56□□□□□ -0.24
IFFO1-204ENST00000396840 C18orf65Q6ZTR6 163 aa13.56□□□□□ -0.24
IFFO1-204ENST00000396840 A0A0J9YXV3 536 aa13.55□□□□□ -0.24
IFFO1-204ENST00000396840 TRBV6-5A0A0K0K1A5 114 aa13.55□□□□□ -0.24
IFFO1-204ENST00000396840 H7C2G1 150 aa13.55□□□□□ -0.24
IFFO1-204ENST00000396840 IGHV3-30P01768 117 aa13.55□□□□□ -0.24
IFFO1-204ENST00000396840 CFC1BP0CG36 223 aa13.55□□□□□ -0.24
IFFO1-204ENST00000396840 CFC1P0CG37 223 aa13.55□□□□□ -0.24
IFFO1-204ENST00000396840 IGHV3-30-5P0DP03 117 aa13.55□□□□□ -0.24
IFFO1-204ENST00000396840 TRPT1Q86TN4 253 aaKnown RBP13.55□□□□□ -0.24
IFFO1-204ENST00000396840 DUX3Q96PT4 197 aa13.55□□□□□ -0.24
IFFO1-204ENST00000396840 ADARB2-AS1A8MUL3 147 aa13.54□□□□□ -0.24
IFFO1-204ENST00000396840 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
IFFO1-204ENST00000396840 BEX4Q9NWD9 120 aaPredicted RBP13.54□□□□□ -0.24
IFFO1-204ENST00000396840 Q9UF83 564 aa13.54□□□□□ -0.24
IFFO1-204ENST00000396840 AMELXQ99217 191 aa13.54□□□□□ -0.24
IFFO1-204ENST00000396840 PTPN13Q12923 2485 aa13.53□□□□□ -0.24
IFFO1-204ENST00000396840 A0A1B0GV72 72 aa13.53□□□□□ -0.24
IFFO1-204ENST00000396840 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
IFFO1-204ENST00000396840 SLC25A29Q8N8R3 303 aa13.53□□□□□ -0.24
IFFO1-204ENST00000396840 NACAE9PAV3 2078 aa13.53□□□□□ -0.24
IFFO1-204ENST00000396840 TRAV2A0A0B4J234 112 aa13.53□□□□□ -0.24
IFFO1-204ENST00000396840 SLURP1P55000 103 aa13.53□□□□□ -0.24
IFFO1-204ENST00000396840 TCTEX1D4Q5JR98 221 aa13.53□□□□□ -0.24
IFFO1-204ENST00000396840 C20orf203Q8NBC4 194 aa13.53□□□□□ -0.24
IFFO1-204ENST00000396840 I3L3M4 83 aa13.52□□□□□ -0.25
IFFO1-204ENST00000396840 DEFB131AP59861 70 aa13.52□□□□□ -0.25
IFFO1-204ENST00000396840 NSUN5P1Q3KNT7 163 aa13.52□□□□□ -0.25
IFFO1-204ENST00000396840 NFE4Q86UQ8 179 aa13.52□□□□□ -0.25
IFFO1-204ENST00000396840 NOTCH3Q9UM47 2321 aa13.51□□□□□ -0.25
IFFO1-204ENST00000396840 TCL1BO95988 128 aa13.51□□□□□ -0.25
IFFO1-204ENST00000396840 SCGB1C2P0DMR2 95 aa13.51□□□□□ -0.25
IFFO1-204ENST00000396840 LINC01356Q8N9X3 169 aa13.51□□□□□ -0.25
IFFO1-204ENST00000396840 SPXQ9BT56 116 aa13.51□□□□□ -0.25
IFFO1-204ENST00000396840 VCX2Q9H322 139 aa13.51□□□□□ -0.25
IFFO1-204ENST00000396840 SCGB1A1P11684 91 aa13.51□□□□□ -0.25
IFFO1-204ENST00000396840 ODF3Q96PU9 254 aa13.51□□□□□ -0.25
IFFO1-204ENST00000396840 ZNF22P17026 224 aaPredicted RBP13.5□□□□□ -0.25
IFFO1-204ENST00000396840 IGLV4-3A0A075B6K6 122 aa13.5□□□□□ -0.25
IFFO1-204ENST00000396840 TMEM223A0PJW6 202 aa13.5□□□□□ -0.25
IFFO1-204ENST00000396840 A4D1N5 150 aa13.5□□□□□ -0.25
IFFO1-204ENST00000396840 UBE2D3P61077 147 aa13.49□□□□□ -0.25
IFFO1-204ENST00000396840 UBE2D2P62837 147 aa13.49□□□□□ -0.25
IFFO1-204ENST00000396840 WNK1Q9H4A3 2382 aa13.49□□□□□ -0.25
IFFO1-204ENST00000396840 RHODO00212 210 aa13.49□□□□□ -0.25
IFFO1-204ENST00000396840 FOXI1Q12951 378 aa13.49□□□□□ -0.25
IFFO1-204ENST00000396840 RHOHQ15669 191 aa13.49□□□□□ -0.25
IFFO1-204ENST00000396840 KHDC1LQ5JSQ8 128 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 C1QTNF4Q9BXJ3 329 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 ZNF462Q96JM2 2506 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 CD28P10747 220 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 GATA3P23771 443 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 CKS1BP61024 79 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 C10orf126Q8N4M7 172 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 PRO1854Q9UHT4 67 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 VPREB3Q9UKI3 123 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 CHD6Q8TD26 2715 aa13.48□□□□□ -0.25
IFFO1-204ENST00000396840 TRAV8-3A0A0A6YYJ7 113 aa13.47□□□□□ -0.25
IFFO1-204ENST00000396840 SONP18583 2426 aaKnown RBP13.47□□□□□ -0.25
IFFO1-204ENST00000396840 TRGV11A0A075B6L2 103 aa13.47□□□□□ -0.25
IFFO1-204ENST00000396840 NAV2Q8IVL1 2488 aa13.47□□□□□ -0.25
IFFO1-204ENST00000396840 LEPROTO15243 131 aa13.47□□□□□ -0.25
IFFO1-204ENST00000396840 EIF4EBP3O60516 100 aaPredicted RBP13.47□□□□□ -0.25
IFFO1-204ENST00000396840 MUSTN1Q8IVN3 82 aa13.47□□□□□ -0.25
IFFO1-204ENST00000396840 SPATA25Q9BR10 227 aa13.47□□□□□ -0.25
IFFO1-204ENST00000396840 ZNF702PQ9H963 129 aa13.47□□□□□ -0.25
IFFO1-204ENST00000396840 EPG5Q9HCE0 2579 aa13.46□□□□□ -0.25
IFFO1-204ENST00000396840 Q6ZSN1 163 aa13.46□□□□□ -0.25
IFFO1-204ENST00000396840 IGHV3-38A0A0C4DH36 116 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms