RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SSSCA1O60232 199 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 HINT1P49773 126 aaPredicted RBP2.88□□□□□ -1.95
GABPB1-204ENST00000396464 RPL26P61254 145 aaKnown RBP2.88□□□□□ -1.95
GABPB1-204ENST00000396464 RBM3P98179 157 aaKnown RBP2.88□□□□□ -1.95
GABPB1-204ENST00000396464 SPRNQ5BIV9 151 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 ZCCHC23Q6ZST2 131 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 C5orf38Q86SI9 138 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 NDUFB11Q9NX14 153 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 TANC1Q9C0D5 1861 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 CENPFP49454 3210 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 NACAE9PAV3 2078 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 CACNA1DQ01668 2161 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 MUC21A0A140T8X8 626 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 UBE2L5PA0A1B0GUS4 154 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 A0A1W2PNM2 257 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 H3BQ15 152 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 ERC2-IT1O76042 136 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 HRES1P13985 223 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 UBE2L3P68036 154 aaKnown RBP2.87□□□□□ -1.95
GABPB1-204ENST00000396464 SPANXN1Q5VSR9 72 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 Q8TAT8 98 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 Q9BRP9 147 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 PSORS1C2Q9UIG4 136 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 COL1A2P08123 1366 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 KIAA2026Q5HYC2 2103 aa2.87□□□□□ -1.95
GABPB1-204ENST00000396464 ARHGAP32A7KAX9 2087 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 G3V3Q6 166 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 GNGT2O14610 69 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 IGKV3-11P04433 115 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 IQCJQ1A5X6 159 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 TMEM141Q96I45 108 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 Q9Y3F1 56 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 SIP14410 1827 aa2.86□□□□□ -1.95
GABPB1-204ENST00000396464 TRAV12-1A0A0B4J245 112 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 UBE2G1P62253 170 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 FAM74A1Q5RGS3 127 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 MUC4Q99102 2169 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 DNAH12Q6ZR08 3092 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 A0A1W2PNU3 283 aaPredicted RBP2.85□□□□□ -1.95
GABPB1-204ENST00000396464 CXCL8P10145 99 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 PRB4P10163 310 aaPredicted RBP2.85□□□□□ -1.95
GABPB1-204ENST00000396464 LY6EQ16553 131 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 CLECL1Q8IZS7 167 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 Q8N9L7 120 aa2.85□□□□□ -1.95
GABPB1-204ENST00000396464 HTTP42858 3142 aa2.84□□□□□ -1.95
GABPB1-204ENST00000396464 IGKV1D-17A0A075B6S4 117 aa2.84□□□□□ -1.96
GABPB1-204ENST00000396464 TRAV17A0A0B4J275 112 aa2.84□□□□□ -1.96
GABPB1-204ENST00000396464 CD52P31358 61 aa2.84□□□□□ -1.96
GABPB1-204ENST00000396464 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.96
GABPB1-204ENST00000396464 PYDC2Q56P42 97 aa2.84□□□□□ -1.96
GABPB1-204ENST00000396464 UNQ5815/PRO19632Q6UWF5 114 aa2.84□□□□□ -1.96
GABPB1-204ENST00000396464 TNRC6AQ8NDV7 1962 aaKnown RBP2.83□□□□□ -1.96
GABPB1-204ENST00000396464 TRAV2A0A0B4J234 112 aa2.83□□□□□ -1.96
GABPB1-204ENST00000396464 C2orf70A6NJV1 201 aa2.83□□□□□ -1.96
GABPB1-204ENST00000396464 MRPS14O60783 128 aaKnown RBP2.83□□□□□ -1.96
GABPB1-204ENST00000396464 C6orf52Q5T4I8 152 aa2.83□□□□□ -1.96
GABPB1-204ENST00000396464 COMMD6Q7Z4G1 85 aa2.83□□□□□ -1.96
GABPB1-204ENST00000396464 C10orf82Q8WW14 230 aa2.83□□□□□ -1.96
GABPB1-204ENST00000396464 CCL26Q9Y258 94 aa2.83□□□□□ -1.96
GABPB1-204ENST00000396464 BRCA2P51587 3418 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 MYLKQ15746 1914 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 LTBP2Q14767 1821 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 EML5Q05BV3 1969 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 hADV29S1A0JD25 119 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 CCKP06307 115 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 SLC25A6P12236 298 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 CBLN1P23435 193 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 SNRPFP62306 86 aaKnown RBP2.82□□□□□ -1.96
GABPB1-204ENST00000396464 PEA15Q15121 130 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 RHOHQ15669 191 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 Q1T7F1 81 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 TDRG1Q3Y452 100 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 DEFB134Q4QY38 66 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 C9orf116Q5BN46 136 aaPredicted RBP2.82□□□□□ -1.96
GABPB1-204ENST00000396464 KRTAP26-1Q6PEX3 210 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 C2orf82Q6UX34 121 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 Q6ZTI0 123 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 ZNF720Q7Z2F6 126 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 PMCHL2Q9BQD1 86 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 PRR34Q9NV39 138 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 MED9Q9NWA0 146 aa2.82□□□□□ -1.96
GABPB1-204ENST00000396464 HEATR5BQ9P2D3 2071 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 SDK2Q58EX2 2172 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 MICAL3Q7RTP6 2002 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 PDCD11Q14690 1871 aaKnown RBP2.81□□□□□ -1.96
GABPB1-204ENST00000396464 GBF1Q92538 1859 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 PIGBOS1A0A0B4J2F0 54 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 A6NIN4 97 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 K7EP34 96 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 CTSGP08311 255 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 NMBP08949 121 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 ZNF833PQ6ZTB9 187 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 LINC00474Q9P2X8 69 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 TP53TG3Q9ULZ0 132 aa2.81□□□□□ -1.96
GABPB1-204ENST00000396464 COL4A4P53420 1690 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms