RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 FAM19A4Q96LR4 140 aa10.23□□□□□ -0.77
CCDC142-202ENST00000393965 P0DMU3 169 aa10.23□□□□□ -0.77
CCDC142-202ENST00000393965 FAM231AP0DMU4 169 aa10.23□□□□□ -0.77
CCDC142-202ENST00000393965 FAM231CP0DMU5 169 aa10.23□□□□□ -0.77
CCDC142-202ENST00000393965 MDFICQ9P1T7 246 aa10.23□□□□□ -0.77
CCDC142-202ENST00000393965 IGHV4OR15-8A0A075B7B6 117 aa10.22□□□□□ -0.77
CCDC142-202ENST00000393965 A0A087WW49 117 aa10.22□□□□□ -0.77
CCDC142-202ENST00000393965 H3BUA1 57 aa10.22□□□□□ -0.77
CCDC142-202ENST00000393965 SIVA1O15304 175 aa10.22□□□□□ -0.77
CCDC142-202ENST00000393965 IGHV4-31P0DP07 118 aa10.22□□□□□ -0.77
CCDC142-202ENST00000393965 PLNP26678 52 aa10.22□□□□□ -0.77
CCDC142-202ENST00000393965 KIR2DL4Q99706 377 aa10.22□□□□□ -0.77
CCDC142-202ENST00000393965 RRN3P1Q2M238 152 aa10.22□□□□□ -0.77
CCDC142-202ENST00000393965 SDHAF1A6NFY7 115 aa10.21□□□□□ -0.77
CCDC142-202ENST00000393965 SPXQ9BT56 116 aa10.21□□□□□ -0.77
CCDC142-202ENST00000393965 CIDEAO60543 219 aa10.21□□□□□ -0.77
CCDC142-202ENST00000393965 ATP6V0BQ99437 205 aa10.21□□□□□ -0.77
CCDC142-202ENST00000393965 SPANXB1Q9NS25 103 aaPredicted RBP10.21□□□□□ -0.77
CCDC142-202ENST00000393965 FASNP49327 2511 aaKnown RBP10.21□□□□□ -0.78
CCDC142-202ENST00000393965 IGHV3-38A0A0C4DH36 116 aa10.21□□□□□ -0.78
CCDC142-202ENST00000393965 OVOL1O14753 267 aa10.21□□□□□ -0.78
CCDC142-202ENST00000393965 ORMDL2Q53FV1 153 aa10.21□□□□□ -0.78
CCDC142-202ENST00000393965 A8MZ25 164 aa10.2□□□□□ -0.78
CCDC142-202ENST00000393965 ZNF625Q96I27 306 aaPredicted RBP10.2□□□□□ -0.78
CCDC142-202ENST00000393965 IGHV3-16A0A0C4DH30 117 aa10.2□□□□□ -0.78
CCDC142-202ENST00000393965 CKS1BP61024 79 aa10.2□□□□□ -0.78
CCDC142-202ENST00000393965 ZNF702PQ9H963 129 aa10.2□□□□□ -0.78
CCDC142-202ENST00000393965 E9PLD3 99 aa10.2□□□□□ -0.78
CCDC142-202ENST00000393965 LGALS3P17931 250 aaKnown RBP10.2□□□□□ -0.78
CCDC142-202ENST00000393965 PROK1P58294 105 aa10.2□□□□□ -0.78
CCDC142-202ENST00000393965 PHLDA1Q8WV24 401 aaPredicted RBP10.2□□□□□ -0.78
CCDC142-202ENST00000393965 LINC01546A6NGU7 62 aa10.19□□□□□ -0.78
CCDC142-202ENST00000393965 BRI3O95415 125 aa10.19□□□□□ -0.78
CCDC142-202ENST00000393965 DSCR9P59020 149 aa10.19□□□□□ -0.78
CCDC142-202ENST00000393965 DEFB113Q30KQ7 82 aa10.19□□□□□ -0.78
CCDC142-202ENST00000393965 IGHV4-4A0A075B6R2 117 aa10.19□□□□□ -0.78
CCDC142-202ENST00000393965 WFDC11Q8NEX6 87 aa10.19□□□□□ -0.78
CCDC142-202ENST00000393965 SUMO4Q6EEV6 95 aa10.19□□□□□ -0.78
CCDC142-202ENST00000393965 TRPT1Q86TN4 253 aaKnown RBP10.19□□□□□ -0.78
CCDC142-202ENST00000393965 DAND5Q8N907 189 aa10.19□□□□□ -0.78
CCDC142-202ENST00000393965 SLURP1P55000 103 aa10.18□□□□□ -0.78
CCDC142-202ENST00000393965 PDZD2O15018 2839 aa10.18□□□□□ -0.78
CCDC142-202ENST00000393965 ZNF876PQ49A33 203 aa10.18□□□□□ -0.78
CCDC142-202ENST00000393965 TRAV26-1A0A087WT03 109 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 TSPEAR-AS2P59090 65 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 TM2D2Q9BX73 214 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 VPREB3Q9UKI3 123 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 ZMAT4Q9H898 229 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 A0A0J9YXV3 536 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 C9JAW5 83 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 GATA3P23771 443 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 HOXD3P31249 432 aaPredicted RBP10.17□□□□□ -0.78
CCDC142-202ENST00000393965 HERVK_113P61574 105 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 Q6YL49 198 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 C3orf56Q8N813 242 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 LENEPQ9Y5L5 61 aa10.17□□□□□ -0.78
CCDC142-202ENST00000393965 KLLNB2CW77 178 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 MORN3Q6PF18 240 aaPredicted RBP10.16□□□□□ -0.78
CCDC142-202ENST00000393965 Q6ZSV7 163 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 KRTAP1-3Q8IUG1 177 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 NEXN-AS1Q8NBZ9 246 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 GCN1Q92616 2671 aaKnown RBP10.16□□□□□ -0.78
CCDC142-202ENST00000393965 FSHBP01225 129 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 MT-ATP8P03928 68 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 Q9UF83 564 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 ANK3Q12955 4377 aaKnown RBP10.16□□□□□ -0.78
CCDC142-202ENST00000393965 TSPAN13O95857 204 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 APRG1Q8IVJ8 170 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 HIGD1BQ9P298 99 aa10.16□□□□□ -0.78
CCDC142-202ENST00000393965 TRAV8-3A0A0A6YYJ7 113 aa10.15□□□□□ -0.78
CCDC142-202ENST00000393965 IGKV3OR2-268A0A0C4DH90 116 aa10.15□□□□□ -0.78
CCDC142-202ENST00000393965 MRAP2Q96G30 205 aa10.15□□□□□ -0.78
CCDC142-202ENST00000393965 LINC00315P59091 139 aa10.15□□□□□ -0.78
CCDC142-202ENST00000393965 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
CCDC142-202ENST00000393965 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
CCDC142-202ENST00000393965 NBEAL2Q6ZNJ1 2754 aa10.15□□□□□ -0.78
CCDC142-202ENST00000393965 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 A0A1B0GV72 72 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 F8W1H4 67 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 K7EMT4 169 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 RBMY1A1P0DJD3 496 aaKnown RBP10.14□□□□□ -0.79
CCDC142-202ENST00000393965 RBMY1CP0DJD4 496 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 RBMY1FQ15415 496 aaKnown RBP10.14□□□□□ -0.79
CCDC142-202ENST00000393965 NFE4Q86UQ8 179 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 Q8N1Y9 231 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 TMEM238LA0A1B0GVL6 79 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 A6NJY4 79 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 KIF25-AS1Q9Y6Z4 181 aa10.14□□□□□ -0.79
CCDC142-202ENST00000393965 TCL1BO95988 128 aa10.13□□□□□ -0.79
CCDC142-202ENST00000393965 TCTEX1D4Q5JR98 221 aa10.13□□□□□ -0.79
CCDC142-202ENST00000393965 ZNRF2Q8NHG8 242 aa10.13□□□□□ -0.79
CCDC142-202ENST00000393965 A4D1N5 150 aa10.13□□□□□ -0.79
CCDC142-202ENST00000393965 SS18L2Q9UHA2 77 aa10.13□□□□□ -0.79
CCDC142-202ENST00000393965 A0A0J9YX75 114 aa10.13□□□□□ -0.79
CCDC142-202ENST00000393965 K7EQG2 157 aa10.13□□□□□ -0.79
CCDC142-202ENST00000393965 SETXQ7Z333 2677 aaKnown RBP10.12□□□□□ -0.79
CCDC142-202ENST00000393965 TSHBP01222 138 aa10.12□□□□□ -0.79
CCDC142-202ENST00000393965 IGHV3-53P01767 116 aa10.12□□□□□ -0.79
CCDC142-202ENST00000393965 UNC79Q9P2D8 2635 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms