RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 ALMS1Q8TCU4 4167 aa-1.66□□□□□ -2.67
SNORA40.4-201ENST00000390971 TRAV1-2A0A0B4J238 106 aa-1.66□□□□□ -2.68
SNORA40.4-201ENST00000390971 TRAV22A0A0B4J277 110 aa-1.66□□□□□ -2.68
SNORA40.4-201ENST00000390971 TNFSF15O95150 251 aa-1.66□□□□□ -2.68
SNORA40.4-201ENST00000390971 TSTD3H0UI37 97 aa-1.67□□□□□ -2.68
SNORA40.4-201ENST00000390971 LINC01545Q5VT33 79 aa-1.67□□□□□ -2.68
SNORA40.4-201ENST00000390971 NDUFA12Q9UI09 145 aa-1.67□□□□□ -2.68
SNORA40.4-201ENST00000390971 SPTBN1Q01082 2364 aaKnown RBP-1.67□□□□□ -2.68
SNORA40.4-201ENST00000390971 CMPK1P30085 196 aa-1.68□□□□□ -2.68
SNORA40.4-201ENST00000390971 WFDC6Q9BQY6 131 aa-1.68□□□□□ -2.68
SNORA40.4-201ENST00000390971 HIGD1AQ9Y241 93 aa-1.68□□□□□ -2.68
SNORA40.4-201ENST00000390971 ERCC6Q03468 1493 aa-1.69□□□□□ -2.68
SNORA40.4-201ENST00000390971 IBTKQ9P2D0 1353 aaPredicted RBP-1.69□□□□□ -2.68
SNORA40.4-201ENST00000390971 SIPA1L3O60292 1781 aaPredicted RBP-1.69□□□□□ -2.68
SNORA40.4-201ENST00000390971 Q8IZM0 81 aa-1.69□□□□□ -2.68
SNORA40.4-201ENST00000390971 COL6A3P12111 3177 aa-1.69□□□□□ -2.68
SNORA40.4-201ENST00000390971 PARP14Q460N5 1801 aa-1.7□□□□□ -2.68
SNORA40.4-201ENST00000390971 SPRR1AP35321 89 aa-1.7□□□□□ -2.68
SNORA40.4-201ENST00000390971 KRTAP19-8Q3LI54 63 aa-1.7□□□□□ -2.68
SNORA40.4-201ENST00000390971 Q5VV11 94 aa-1.7□□□□□ -2.68
SNORA40.4-201ENST00000390971 HSPB11Q9Y547 144 aa-1.7□□□□□ -2.68
SNORA40.4-201ENST00000390971 BSNQ9UPA5 3926 aa-1.71□□□□□ -2.68
SNORA40.4-201ENST00000390971 NF1P21359 2839 aa-1.72□□□□□ -2.68
SNORA40.4-201ENST00000390971 GINS2Q9Y248 185 aa-1.72□□□□□ -2.68
SNORA40.4-201ENST00000390971 ZMYM4Q5VZL5 1548 aa-1.72□□□□□ -2.69
SNORA40.4-201ENST00000390971 CREBBPQ92793 2442 aa-1.73□□□□□ -2.69
SNORA40.4-201ENST00000390971 TRBV20-1A0A075B6N2 111 aa-1.73□□□□□ -2.69
SNORA40.4-201ENST00000390971 SPANXN1Q5VSR9 72 aa-1.73□□□□□ -2.69
SNORA40.4-201ENST00000390971 SMIM15Q7Z3B0 74 aa-1.73□□□□□ -2.69
SNORA40.4-201ENST00000390971 VSTM2AQ8TAG5 236 aa-1.73□□□□□ -2.69
SNORA40.4-201ENST00000390971 HERC2O95714 4834 aa-1.74□□□□□ -2.69
SNORA40.4-201ENST00000390971 SPCS1Q9Y6A9 102 aa-1.74□□□□□ -2.69
SNORA40.4-201ENST00000390971 ACANP16112 2415 aa-1.74□□□□□ -2.69
SNORA40.4-201ENST00000390971 ARFGEF1Q9Y6D6 1849 aa-1.75□□□□□ -2.69
SNORA40.4-201ENST00000390971 PLCE1Q9P212 2302 aa-1.75□□□□□ -2.69
SNORA40.4-201ENST00000390971 RPRMQ9NS64 109 aa-1.75□□□□□ -2.69
SNORA40.4-201ENST00000390971 SPANXCQ9NY87 97 aa-1.75□□□□□ -2.69
SNORA40.4-201ENST00000390971 ZNF609O15014 1411 aa-1.75□□□□□ -2.69
SNORA40.4-201ENST00000390971 UBE2D1P51668 147 aa-1.76□□□□□ -2.69
SNORA40.4-201ENST00000390971 C10orf82Q8WW14 230 aa-1.76□□□□□ -2.69
SNORA40.4-201ENST00000390971 FAT1Q14517 4588 aa-1.76□□□□□ -2.69
SNORA40.4-201ENST00000390971 SETXQ7Z333 2677 aaKnown RBP-1.76□□□□□ -2.69
SNORA40.4-201ENST00000390971 WNK1Q9H4A3 2382 aa-1.77□□□□□ -2.69
SNORA40.4-201ENST00000390971 MUC22E2RYF6 1773 aaPredicted RBP-1.77□□□□□ -2.69
SNORA40.4-201ENST00000390971 CLPSL1A2RUU4 121 aa-1.78□□□□□ -2.69
SNORA40.4-201ENST00000390971 SMIM6P0DI80 62 aa-1.78□□□□□ -2.69
SNORA40.4-201ENST00000390971 NCS1P62166 190 aa-1.78□□□□□ -2.69
SNORA40.4-201ENST00000390971 CCDC153Q494R4 210 aa-1.78□□□□□ -2.69
SNORA40.4-201ENST00000390971 C9orf116Q5BN46 136 aaPredicted RBP-1.78□□□□□ -2.69
SNORA40.4-201ENST00000390971 RPL7L1Q6DKI1 246 aaKnown RBP-1.78□□□□□ -2.69
SNORA40.4-201ENST00000390971 IFT172Q9UG01 1749 aa-1.78□□□□□ -2.69
SNORA40.4-201ENST00000390971 IFNA17P01571 189 aa-1.79□□□□□ -2.7
SNORA40.4-201ENST00000390971 SAR1AQ9NR31 198 aa-1.79□□□□□ -2.7
SNORA40.4-201ENST00000390971 NEBP20929 6669 aa-1.79□□□□□ -2.7
SNORA40.4-201ENST00000390971 CSPG4Q6UVK1 2322 aa-1.8□□□□□ -2.7
SNORA40.4-201ENST00000390971 PIRTP0C851 137 aa-1.8□□□□□ -2.7
SNORA40.4-201ENST00000390971 BAGE3Q86Y29 109 aa-1.8□□□□□ -2.7
SNORA40.4-201ENST00000390971 FAT2Q9NYQ8 4349 aa-1.8□□□□□ -2.7
SNORA40.4-201ENST00000390971 FAM92AA1XBS5 289 aa-1.81□□□□□ -2.7
SNORA40.4-201ENST00000390971 APOC4-APOC2K7ER74 178 aa-1.81□□□□□ -2.7
SNORA40.4-201ENST00000390971 SPRR2BP35325 72 aa-1.81□□□□□ -2.7
SNORA40.4-201ENST00000390971 CFAP126Q5VTH2 177 aa-1.81□□□□□ -2.7
SNORA40.4-201ENST00000390971 MAP1AP78559 2803 aaPredicted RBP-1.81□□□□□ -2.7
SNORA40.4-201ENST00000390971 LAMA5O15230 3695 aa-1.81□□□□□ -2.7
SNORA40.4-201ENST00000390971 BCL9LQ86UU0 1499 aa-1.82□□□□□ -2.7
SNORA40.4-201ENST00000390971 GVINP1Q7Z2Y8 2422 aa-1.82□□□□□ -2.7
SNORA40.4-201ENST00000390971 DBIP07108 87 aaKnown RBP-1.82□□□□□ -2.7
SNORA40.4-201ENST00000390971 SPANXA1Q9NS26 97 aa-1.82□□□□□ -2.7
SNORA40.4-201ENST00000390971 SCN3BQ9NY72 215 aa-1.82□□□□□ -2.7
SNORA40.4-201ENST00000390971 SYNJ1O43426 1573 aa-1.82□□□□□ -2.7
SNORA40.4-201ENST00000390971 SPTA1P02549 2419 aa-1.83□□□□□ -2.7
SNORA40.4-201ENST00000390971 A6NIN4 97 aa-1.83□□□□□ -2.7
SNORA40.4-201ENST00000390971 NPFFO15130 113 aa-1.83□□□□□ -2.7
SNORA40.4-201ENST00000390971 MIC13Q5XKP0 118 aa-1.83□□□□□ -2.7
SNORA40.4-201ENST00000390971 MORN2Q502X0 79 aa-1.84□□□□□ -2.7
SNORA40.4-201ENST00000390971 MMGT1Q8N4V1 131 aa-1.84□□□□□ -2.7
SNORA40.4-201ENST00000390971 LRRC37A3O60309 1634 aa-1.84□□□□□ -2.7
SNORA40.4-201ENST00000390971 MT4P47944 62 aa-1.85□□□□□ -2.71
SNORA40.4-201ENST00000390971 NPVFQ9HCQ7 196 aa-1.85□□□□□ -2.71
SNORA40.4-201ENST00000390971 FLNBO75369 2602 aaKnown RBP-1.85□□□□□ -2.71
SNORA40.4-201ENST00000390971 DAPK1P53355 1430 aa-1.85□□□□□ -2.71
SNORA40.4-201ENST00000390971 EP300Q09472 2414 aaPredicted RBP-1.86□□□□□ -2.71
SNORA40.4-201ENST00000390971 C10orf71Q711Q0 1435 aa-1.86□□□□□ -2.71
SNORA40.4-201ENST00000390971 NBEAL1Q6ZS30 2694 aa-1.87□□□□□ -2.71
SNORA40.4-201ENST00000390971 UBE2G1P62253 170 aa-1.87□□□□□ -2.71
SNORA40.4-201ENST00000390971 ATRQ13535 2644 aa-1.87□□□□□ -2.71
SNORA40.4-201ENST00000390971 ZNF818PQ6ZRF7 136 aa-1.87□□□□□ -2.71
SNORA40.4-201ENST00000390971 NBEAP1P0C6P0 100 aa-1.88□□□□□ -2.71
SNORA40.4-201ENST00000390971 STAB2Q8WWQ8 2551 aa-1.88□□□□□ -2.71
SNORA40.4-201ENST00000390971 USF3Q68DE3 2245 aa-1.89□□□□□ -2.71
SNORA40.4-201ENST00000390971 LRP1BQ9NZR2 4599 aa-1.89□□□□□ -2.71
SNORA40.4-201ENST00000390971 CTAGE3PQ8IX95 158 aa-1.89□□□□□ -2.71
SNORA40.4-201ENST00000390971 BCE1O60756 84 aa-1.9□□□□□ -2.71
SNORA40.4-201ENST00000390971 WNK3Q9BYP7 1800 aa-1.91□□□□□ -2.71
SNORA40.4-201ENST00000390971 GNG14A0A1W2PPG7 69 aa-1.91□□□□□ -2.72
SNORA40.4-201ENST00000390971 M0R129 80 aa-1.91□□□□□ -2.72
SNORA40.4-201ENST00000390971 S100A5P33763 92 aa-1.91□□□□□ -2.72
SNORA40.4-201ENST00000390971 S100A3P33764 101 aa-1.91□□□□□ -2.72
SNORA40.4-201ENST00000390971 SELENOSQ9BQE4 189 aa-1.91□□□□□ -2.72
SNORA40.4-201ENST00000390971 KDM3BQ7LBC6 1761 aa-1.91□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms