RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 CTNNBIP1Q9NSA3 81 aaPredicted RBP-3.79□□□□□ -3.02
SNORA40-201ENST00000388090 ERG28Q9UKR5 140 aa-3.79□□□□□ -3.02
SNORA40-201ENST00000388090 LRRC37A2A6NM11 1700 aa-3.8□□□□□ -3.02
SNORA40-201ENST00000388090 TRAV2A0A0B4J234 112 aa-3.8□□□□□ -3.02
SNORA40-201ENST00000388090 TRBV27A0A0K0K1C4 114 aa-3.8□□□□□ -3.02
SNORA40-201ENST00000388090 TMEM91Q6ZNR0 172 aa-3.8□□□□□ -3.02
SNORA40-201ENST00000388090 TAS2R8Q9NYW2 309 aa-3.8□□□□□ -3.02
SNORA40-201ENST00000388090 APLNQ9ULZ1 77 aa-3.8□□□□□ -3.02
SNORA40-201ENST00000388090 CCDC171Q6TFL3 1326 aa-3.8□□□□□ -3.02
SNORA40-201ENST00000388090 TRANK1O15050 2925 aa-3.81□□□□□ -3.02
SNORA40-201ENST00000388090 CLPSL1A2RUU4 121 aa-3.81□□□□□ -3.02
SNORA40-201ENST00000388090 APOA2P02652 100 aa-3.81□□□□□ -3.02
SNORA40-201ENST00000388090 TEX29Q8N6K0 151 aa-3.81□□□□□ -3.02
SNORA40-201ENST00000388090 NUP35Q8NFH5 326 aa-3.81□□□□□ -3.02
SNORA40-201ENST00000388090 NMNAT1Q9HAN9 279 aaPredicted RBP-3.81□□□□□ -3.02
SNORA40-201ENST00000388090 FAM186AA6NE01 2351 aa-3.82□□□□□ -3.02
SNORA40-201ENST00000388090 TRIOO75962 3097 aa-3.82□□□□□ -3.02
SNORA40-201ENST00000388090 BORCS8Q96FH0 119 aa-3.82□□□□□ -3.02
SNORA40-201ENST00000388090 FAM92AA1XBS5 289 aa-3.83□□□□□ -3.02
SNORA40-201ENST00000388090 PGRMC1O00264 195 aaKnown RBP-3.83□□□□□ -3.02
SNORA40-201ENST00000388090 MAGOHP61326 146 aaKnown RBP-3.83□□□□□ -3.02
SNORA40-201ENST00000388090 GNG5P63218 68 aa-3.83□□□□□ -3.02
SNORA40-201ENST00000388090 FAM32AQ9Y421 112 aaKnown RBP-3.83□□□□□ -3.02
SNORA40-201ENST00000388090 FRYQ5TBA9 3013 aa-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 CEP295Q9C0D2 2601 aa-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 H0YGG7 62 aa-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 H7C1C5 153 aa-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 SMIM6P0DI80 62 aa-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 LCN6P62502 163 aa-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 MRPS15P82914 257 aaKnown RBP-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 BTF3L4Q96K17 158 aa-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 PRNDQ9UKY0 176 aa-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 NUP210Q8TEM1 1887 aaPredicted RBP-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 ABCA13Q86UQ4 5058 aa-3.84□□□□□ -3.02
SNORA40-201ENST00000388090 STX19Q8N4C7 294 aa-3.85□□□□□ -3.03
SNORA40-201ENST00000388090 SLIT1O75093 1534 aa-3.85□□□□□ -3.03
SNORA40-201ENST00000388090 G3V2T6 193 aa-3.86□□□□□ -3.03
SNORA40-201ENST00000388090 PITX3O75364 302 aa-3.86□□□□□ -3.03
SNORA40-201ENST00000388090 LIN52Q52LA3 116 aa-3.86□□□□□ -3.03
SNORA40-201ENST00000388090 PNMA8CA0A1B0GUJ8 204 aa-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 HBDP02042 147 aa-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 CRYGSP22914 178 aa-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 LSM3P62310 102 aaKnown RBP-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 PLGLB1Q02325 96 aa-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 H1FX-AS1Q4G0G2 97 aa-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 Q6JHZ5 121 aa-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 DYNLRB2Q8TF09 96 aa-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 CHD7Q9P2D1 2997 aa-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 TECPR2O15040 1411 aa-3.87□□□□□ -3.03
SNORA40-201ENST00000388090 PPP5D1E7EU14 171 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 IFNGP01579 166 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 CSN2P05814 226 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 SDC2P34741 201 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 CRYBA4P53673 196 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 PCBD1P61457 104 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 LINC00305Q7Z4B0 112 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 NBEAL2Q6ZNJ1 2754 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 FER1L6Q2WGJ9 1857 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 ZFYVE9O95405 1425 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 KIAA0556O60303 1618 aa-3.88□□□□□ -3.03
SNORA40-201ENST00000388090 MRC1P22897 1456 aa-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 TRAV13-1A0A0B4J241 112 aa-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 H3BMG7 143 aa-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 GABARAPH6UMI1 98 aa-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 CETN3O15182 167 aa-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 SRP9P49458 86 aaKnown RBP-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 BASP1P80723 227 aaKnown RBP-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 CROCCP2Q86T23 111 aa-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 CNPY4Q8N129 248 aa-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 CCDC42Q96M95 316 aa-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 SSR3Q9UNL2 185 aa-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 MUC22E2RYF6 1773 aaPredicted RBP-3.89□□□□□ -3.03
SNORA40-201ENST00000388090 C5orf42Q9H799 3197 aa-3.9□□□□□ -3.03
SNORA40-201ENST00000388090 ZNF236Q9UL36 1845 aa-3.9□□□□□ -3.03
SNORA40-201ENST00000388090 TRDV1A0A1B0GX56 115 aa-3.9□□□□□ -3.03
SNORA40-201ENST00000388090 SYS1-DBNDD2H3BUS1 97 aa-3.9□□□□□ -3.03
SNORA40-201ENST00000388090 COX8AP10176 69 aa-3.9□□□□□ -3.03
SNORA40-201ENST00000388090 LSM6P62312 80 aaKnown RBP-3.9□□□□□ -3.03
SNORA40-201ENST00000388090 C9orf116Q5BN46 136 aaPredicted RBP-3.9□□□□□ -3.03
SNORA40-201ENST00000388090 MYH2Q9UKX2 1941 aa-3.91□□□□□ -3.04
SNORA40-201ENST00000388090 COL6A5A8TX70 2615 aa-3.91□□□□□ -3.04
SNORA40-201ENST00000388090 LTC4SQ16873 150 aa-3.91□□□□□ -3.04
SNORA40-201ENST00000388090 HSD17B12Q53GQ0 312 aa-3.91□□□□□ -3.04
SNORA40-201ENST00000388090 SMIM4Q8WVI0 70 aa-3.91□□□□□ -3.04
SNORA40-201ENST00000388090 CPSF4LA6NMK7 179 aaKnown RBP-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 CCDC179H3BU77 68 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 S100A6P06703 90 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 PPP1R2P41236 205 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 UBE2D1P51668 147 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 TMED2Q15363 201 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 C9orf16Q9BUW7 83 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 SH3BGRL3Q9H299 93 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 LYRM2Q9NU23 88 aaPredicted RBP-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 METTL1Q9UBP6 276 aaKnown RBP-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 HMGXB3Q12766 1538 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 PAPPA2Q9BXP8 1791 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 DNAH8Q96JB1 4490 aa-3.92□□□□□ -3.04
SNORA40-201ENST00000388090 CEP290O15078 2479 aa-3.93□□□□□ -3.04
SNORA40-201ENST00000388090 TULP4Q9NRJ4 1543 aa-3.93□□□□□ -3.04
SNORA40-201ENST00000388090 CCL18P55774 89 aa-3.93□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms