RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SERPIND1P05546 499 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 HIST1H2AGP0C0S8 130 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 TALDO1P37837 337 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 RAB8AP61006 207 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 VSNL1P62760 191 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 RANP62826 216 aaKnown RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 SETQ01105 290 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 CCDC58Q4VC31 144 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 HIKESHIQ53FT3 197 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 CFAP58Q5T655 872 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 THOC7Q6I9Y2 204 aaKnown RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 TMEM182Q6ZP80 229 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 Q6ZSR6 202 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 AHSA2Q719I0 299 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 METTL23Q86XA0 190 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 HIST2H2ABQ8IUE6 130 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 TRAPPC5Q8IUR0 188 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR8H2Q8N162 312 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR8A1Q8NGG7 326 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR6K3Q8NGY3 331 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 LGALS14Q8TCE9 139 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 GPR151Q8TDV0 419 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 AP3S1Q92572 193 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 HIST1H2ACQ93077 130 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 C8orf76Q96K31 380 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 NAP1L5Q96NT1 182 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 ACTR6Q9GZN1 396 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 CKLFQ9UBR5 152 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 RABL2BQ9UNT1 228 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 SLC35A3Q9Y2D2 325 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 ARL5AQ9Y689 179 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 C9orf84Q5VXU9 1444 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 EDC4Q6P2E9 1401 aaKnown RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 PZPP20742 1482 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 UGGT1Q9NYU2 1555 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 TRAV9-1A0A075B6T8 112 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 C3orf85A0A1B0GTC6 90 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 ETDCA0A1B0GVM5 59 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 BBIP1A8MTZ0 92 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 M0R1X1 148 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 LSM1O15116 133 aaKnown RBP-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 CTDSPLO15194 276 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 NDUFB1O75438 58 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 TNFSF15O95150 251 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 GAS8O95995 478 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 CXCL1P09341 107 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 H2AFXP16104 143 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 HIST1H1DP16402 221 aaKnown RBP-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 RPL12P30050 165 aaKnown RBP-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 CASQ1P31415 396 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 PSMB2P49721 201 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 RAB5CP51148 216 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 MXD1Q05195 221 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 C10orf128Q5T292 105 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 TRAPPC6BQ86SZ2 158 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 TUSC5Q8IXB3 177 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 CCDC148Q8NFR7 591 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 OR4K15Q8NH41 348 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 GLYATL2Q8WU03 294 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 TMEM263Q8WUH6 116 aaKnown RBP-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 EEF1AKMT1Q8WVE0 214 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 FAM167A-AS1Q96KT0 104 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 PBDC1Q9BVG4 233 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 HOMER3Q9NSC5 361 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 CHCHD3Q9NX63 227 aaKnown RBP-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 IL20Q9NYY1 176 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 LSM2Q9Y333 95 aaKnown RBP-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 TOPBP1Q92547 1522 aa-2.29□□□□□ -2.78
RNU6-540P-201ENST00000384622 RAPGEF6Q8TEU7 1601 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 CFAP73A6NFT4 308 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 K7EQM0 130 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 LGALS8O00214 317 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 STX6O43752 255 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 PRPSAP2O60256 369 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 ARL6IP5O75915 188 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 RALAP11233 206 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 ANXA3P12429 323 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 GFAPP14136 432 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 RAB5AP20339 215 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 RPS12P25398 132 aaKnown RBP-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 SPAG1Q07617 926 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 RGS1Q08116 209 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 PNOCQ13519 176 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 COTL1Q14019 142 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 HSP90AB4PQ58FF6 505 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 PIP5KL1Q5T9C9 394 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 OR2T2Q6IF00 324 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 SLC35D2Q76EJ3 337 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 COMMD7Q86VX2 200 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 NUDCD3Q8IVD9 361 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 NKAIN4Q8IVV8 208 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 HDDC3Q8N4P3 179 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 OR4F6Q8NGB9 312 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 BRK1Q8WUW1 75 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 LRRC29Q8WV35 223 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 NT5C3BQ969T7 300 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 FMC1Q96HJ9 113 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 ATP6V1G3Q96LB4 118 aa-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 ZMAT2Q96NC0 199 aaKnown RBP-2.3□□□□□ -2.78
RNU6-540P-201ENST00000384622 RAB18Q9NP72 206 aa-2.3□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms