RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 K7EMI3 77 aa14.33□□□□□ -0.12
SSU72-204ENST00000378726 MED14OSP0DP75 135 aa14.33□□□□□ -0.12
SSU72-204ENST00000378726 M0R381 172 aa14.32□□□□□ -0.12
SSU72-204ENST00000378726 CD7P09564 240 aa14.32□□□□□ -0.12
SSU72-204ENST00000378726 PHLDA1Q8WV24 401 aaPredicted RBP14.32□□□□□ -0.12
SSU72-204ENST00000378726 C2CD3Q4AC94 2353 aa14.31□□□□□ -0.12
SSU72-204ENST00000378726 NDUFA11Q86Y39 141 aa14.31□□□□□ -0.12
SSU72-204ENST00000378726 CEND1Q8N111 149 aa14.31□□□□□ -0.12
SSU72-204ENST00000378726 A8MTW9 85 aa14.3□□□□□ -0.12
SSU72-204ENST00000378726 A0A087WX48 190 aa14.3□□□□□ -0.12
SSU72-204ENST00000378726 RPL24P83731 157 aaKnown RBP14.3□□□□□ -0.12
SSU72-204ENST00000378726 TM2D2Q9BX73 214 aa14.3□□□□□ -0.12
SSU72-204ENST00000378726 NHP2Q9NX24 153 aaKnown RBP14.3□□□□□ -0.12
SSU72-204ENST00000378726 IGHV1OR15-1A0A075B7D0 117 aa14.29□□□□□ -0.12
SSU72-204ENST00000378726 RBMY1BA6NDE4 496 aaKnown RBP14.29□□□□□ -0.12
SSU72-204ENST00000378726 RBMY1EA6NEQ0 496 aaKnown RBP14.29□□□□□ -0.12
SSU72-204ENST00000378726 RBMY1DP0C7P1 496 aaKnown RBP14.29□□□□□ -0.12
SSU72-204ENST00000378726 SCGB1A1P11684 91 aa14.29□□□□□ -0.12
SSU72-204ENST00000378726 ODF3L2Q3SX64 289 aa14.28□□□□□ -0.12
SSU72-204ENST00000378726 NIPBLQ6KC79 2804 aaeCLIP14.28□□□□□ -0.12
SSU72-204ENST00000378726 TEX48A0A1B0GUV7 120 aa14.27□□□□□ -0.13
SSU72-204ENST00000378726 Q8N1Y9 231 aa14.27□□□□□ -0.13
SSU72-204ENST00000378726 MDFICQ9P1T7 246 aa14.26□□□□□ -0.13
SSU72-204ENST00000378726 IGHV3-16A0A0C4DH30 117 aa14.26□□□□□ -0.13
SSU72-204ENST00000378726 C14orf178Q8N769 122 aaPredicted RBP14.26□□□□□ -0.13
SSU72-204ENST00000378726 MRAP2Q96G30 205 aa14.26□□□□□ -0.13
SSU72-204ENST00000378726 SMIM2Q9BVW6 85 aa14.26□□□□□ -0.13
SSU72-204ENST00000378726 OR11H12B2RN74 326 aa14.25□□□□□ -0.13
SSU72-204ENST00000378726 IGLV1-51P01701 117 aa14.25□□□□□ -0.13
SSU72-204ENST00000378726 RBMY1A1P0DJD3 496 aaKnown RBP14.25□□□□□ -0.13
SSU72-204ENST00000378726 RBMY1CP0DJD4 496 aa14.25□□□□□ -0.13
SSU72-204ENST00000378726 RBMY1FQ15415 496 aaKnown RBP14.25□□□□□ -0.13
SSU72-204ENST00000378726 SIGMAR1Q99720 223 aa14.25□□□□□ -0.13
SSU72-204ENST00000378726 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.25□□□□□ -0.13
SSU72-204ENST00000378726 PF4P02776 101 aa14.24□□□□□ -0.13
SSU72-204ENST00000378726 PLNP26678 52 aa14.24□□□□□ -0.13
SSU72-204ENST00000378726 DPH3P1Q9H4G8 78 aa14.24□□□□□ -0.13
SSU72-204ENST00000378726 RASL10AQ92737 203 aa14.23□□□□□ -0.13
SSU72-204ENST00000378726 MUC4Q99102 2169 aa14.23□□□□□ -0.13
SSU72-204ENST00000378726 IGLL5B9A064 214 aa14.23□□□□□ -0.13
SSU72-204ENST00000378726 H7C1H1 209 aa14.23□□□□□ -0.13
SSU72-204ENST00000378726 NXPH4O95158 308 aa14.23□□□□□ -0.13
SSU72-204ENST00000378726 AZU1P20160 251 aa14.23□□□□□ -0.13
SSU72-204ENST00000378726 STHQ8IWL8 128 aa14.23□□□□□ -0.13
SSU72-204ENST00000378726 RPL39LQ96EH5 51 aaKnown RBP14.23□□□□□ -0.13
SSU72-204ENST00000378726 C9orf85Q96MD7 179 aa14.23□□□□□ -0.13
SSU72-204ENST00000378726 E9PLD3 99 aa14.22□□□□□ -0.13
SSU72-204ENST00000378726 F8VRH5 84 aa14.22□□□□□ -0.13
SSU72-204ENST00000378726 HTN1P15515 57 aa14.22□□□□□ -0.13
SSU72-204ENST00000378726 F8P00451 2351 aa14.22□□□□□ -0.13
SSU72-204ENST00000378726 TRAV12-1A0A0B4J245 112 aa14.22□□□□□ -0.13
SSU72-204ENST00000378726 C12orf74Q32Q52 190 aa14.22□□□□□ -0.13
SSU72-204ENST00000378726 CLUHP3Q96NS8 147 aa14.22□□□□□ -0.13
SSU72-204ENST00000378726 SCGB3A1Q96QR1 104 aa14.22□□□□□ -0.13
SSU72-204ENST00000378726 F8W1H4 67 aa14.21□□□□□ -0.13
SSU72-204ENST00000378726 J3QR89 54 aa14.21□□□□□ -0.13
SSU72-204ENST00000378726 CMC4P56277 68 aaPredicted RBP14.21□□□□□ -0.13
SSU72-204ENST00000378726 SUMO2P61956 95 aaKnown RBP14.21□□□□□ -0.13
SSU72-204ENST00000378726 TAL2Q16559 108 aa14.21□□□□□ -0.13
SSU72-204ENST00000378726 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.21□□□□□ -0.13
SSU72-204ENST00000378726 TOMM6Q96B49 74 aa14.21□□□□□ -0.13
SSU72-204ENST00000378726 GTSF1LQ9H1H1 148 aa14.21□□□□□ -0.13
SSU72-204ENST00000378726 LINC00482Q8N8I6 264 aa14.21□□□□□ -0.14
SSU72-204ENST00000378726 HIST1H4GQ99525 98 aa14.21□□□□□ -0.14
SSU72-204ENST00000378726 TRGV11A0A075B6L2 103 aa14.2□□□□□ -0.14
SSU72-204ENST00000378726 ORMDL2Q53FV1 153 aa14.2□□□□□ -0.14
SSU72-204ENST00000378726 JPT2Q9H910 190 aa14.2□□□□□ -0.14
SSU72-204ENST00000378726 MGPP08493 103 aa14.19□□□□□ -0.14
SSU72-204ENST00000378726 NEXN-AS1Q8NBZ9 246 aa14.19□□□□□ -0.14
SSU72-204ENST00000378726 TRBV7-3A0A075B6L6 115 aa14.19□□□□□ -0.14
SSU72-204ENST00000378726 ZNF479Q96JC4 524 aa14.19□□□□□ -0.14
SSU72-204ENST00000378726 KIF25-AS1Q9Y6Z4 181 aa14.19□□□□□ -0.14
SSU72-204ENST00000378726 JMJD1CQ15652 2540 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 GAGE12HA6NDE8 117 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 PRM2P04554 102 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 BEAN1Q3B7T3 259 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 C20orf78Q9BR46 151 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 MYMXA0A1B0GTQ4 84 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 SMAGPQ0VAQ4 97 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 TRPT1Q86TN4 253 aaKnown RBP14.18□□□□□ -0.14
SSU72-204ENST00000378726 SYT8Q8NBV8 401 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 LINC01587Q99440 93 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 SPANXB1Q9NS25 103 aaPredicted RBP14.18□□□□□ -0.14
SSU72-204ENST00000378726 XCL2Q9UBD3 114 aa14.18□□□□□ -0.14
SSU72-204ENST00000378726 LINC00315P59091 139 aa14.17□□□□□ -0.14
SSU72-204ENST00000378726 WFDC2Q14508 124 aa14.17□□□□□ -0.14
SSU72-204ENST00000378726 INSP01308 110 aa14.17□□□□□ -0.14
SSU72-204ENST00000378726 BAALCQ8WXS3 180 aa14.17□□□□□ -0.14
SSU72-204ENST00000378726 A0A087WWL8 130 aa14.16□□□□□ -0.14
SSU72-204ENST00000378726 C2orf66Q6UXQ4 117 aa14.16□□□□□ -0.14
SSU72-204ENST00000378726 OR11H2Q8NH07 326 aa14.16□□□□□ -0.14
SSU72-204ENST00000378726 A0A1B0GV72 72 aa14.15□□□□□ -0.14
SSU72-204ENST00000378726 ZNF876PQ49A33 203 aa14.15□□□□□ -0.14
SSU72-204ENST00000378726 POM121L12Q8N7R1 296 aa14.15□□□□□ -0.14
SSU72-204ENST00000378726 FAM110AQ9BQ89 295 aa14.15□□□□□ -0.14
SSU72-204ENST00000378726 C19orf73Q9NVV2 129 aa14.15□□□□□ -0.14
SSU72-204ENST00000378726 H3BMG7 143 aa14.14□□□□□ -0.15
SSU72-204ENST00000378726 CITED1Q99966 193 aa14.14□□□□□ -0.15
SSU72-204ENST00000378726 SPATA25Q9BR10 227 aa14.14□□□□□ -0.15
SSU72-204ENST00000378726 CYSLTR1Q9Y271 337 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms