RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 NAV3Q8IVL0 2385 aa13.59□□□□□ -0.23
CLSTN1-202ENST00000377298 PRSS47A8MTI9 375 aa13.59□□□□□ -0.23
CLSTN1-202ENST00000377298 COX7A2LO14548 114 aa13.59□□□□□ -0.23
CLSTN1-202ENST00000377298 HIST2H2BCQ6DN03 193 aa13.59□□□□□ -0.23
CLSTN1-202ENST00000377298 Q6ZSV7 163 aa13.59□□□□□ -0.23
CLSTN1-202ENST00000377298 RPL18AQ02543 176 aaKnown RBP13.58□□□□□ -0.23
CLSTN1-202ENST00000377298 K7ERJ3 54 aa13.58□□□□□ -0.24
CLSTN1-202ENST00000377298 MDFICQ9P1T7 246 aa13.58□□□□□ -0.24
CLSTN1-202ENST00000377298 A0A0J9YXV3 536 aa13.58□□□□□ -0.24
CLSTN1-202ENST00000377298 K7EQG2 157 aa13.58□□□□□ -0.24
CLSTN1-202ENST00000377298 TM2D2Q9BX73 214 aa13.58□□□□□ -0.24
CLSTN1-202ENST00000377298 IGLV10-54A0A075B6I4 117 aa13.58□□□□□ -0.24
CLSTN1-202ENST00000377298 LINC00173Q6ZV60 143 aa13.57□□□□□ -0.24
CLSTN1-202ENST00000377298 DEFB114Q30KQ6 69 aa13.57□□□□□ -0.24
CLSTN1-202ENST00000377298 ZNF295-AS1Q8N0V1 137 aa13.57□□□□□ -0.24
CLSTN1-202ENST00000377298 DOPEY1Q5JWR5 2465 aa13.57□□□□□ -0.24
CLSTN1-202ENST00000377298 PPDPFLQ8WWR9 84 aa13.57□□□□□ -0.24
CLSTN1-202ENST00000377298 PRO0255Q9UI72 69 aa13.57□□□□□ -0.24
CLSTN1-202ENST00000377298 TRBV10-1A0A0K0K1A3 114 aa13.57□□□□□ -0.24
CLSTN1-202ENST00000377298 H3BMG7 143 aa13.57□□□□□ -0.24
CLSTN1-202ENST00000377298 IGLL5B9A064 214 aa13.56□□□□□ -0.24
CLSTN1-202ENST00000377298 PCP2Q8IVA1 136 aa13.56□□□□□ -0.24
CLSTN1-202ENST00000377298 TIMM17AQ99595 171 aa13.56□□□□□ -0.24
CLSTN1-202ENST00000377298 TRAV4A0A0B4J268 109 aa13.56□□□□□ -0.24
CLSTN1-202ENST00000377298 SHISA2Q6UWI4 295 aa13.56□□□□□ -0.24
CLSTN1-202ENST00000377298 GAGE12HA6NDE8 117 aa13.56□□□□□ -0.24
CLSTN1-202ENST00000377298 FRMD6-AS1P0C7T7 363 aa13.55□□□□□ -0.24
CLSTN1-202ENST00000377298 IFITM1P13164 125 aa13.55□□□□□ -0.24
CLSTN1-202ENST00000377298 RBMY1FQ15415 496 aaKnown RBP13.55□□□□□ -0.24
CLSTN1-202ENST00000377298 LINC01545Q5VT33 79 aa13.55□□□□□ -0.24
CLSTN1-202ENST00000377298 HIVEP3Q5T1R4 2406 aa13.55□□□□□ -0.24
CLSTN1-202ENST00000377298 TRAV12-1A0A0B4J245 112 aa13.54□□□□□ -0.24
CLSTN1-202ENST00000377298 C12orf74Q32Q52 190 aa13.54□□□□□ -0.24
CLSTN1-202ENST00000377298 PIEZO2Q9H5I5 2752 aa13.54□□□□□ -0.24
CLSTN1-202ENST00000377298 TIRAPP58753 221 aa13.54□□□□□ -0.24
CLSTN1-202ENST00000377298 TOMM6Q96B49 74 aa13.54□□□□□ -0.24
CLSTN1-202ENST00000377298 PSMG3-AS1Q96PY0 264 aa13.53□□□□□ -0.24
CLSTN1-202ENST00000377298 RPL39P62891 51 aaKnown RBP13.53□□□□□ -0.24
CLSTN1-202ENST00000377298 LRP4O75096 1905 aa13.53□□□□□ -0.24
CLSTN1-202ENST00000377298 Q8N6K4 173 aa13.53□□□□□ -0.24
CLSTN1-202ENST00000377298 ZFAND3Q9H8U3 227 aa13.53□□□□□ -0.24
CLSTN1-202ENST00000377298 TNRC6AQ8NDV7 1962 aaKnown RBP13.52□□□□□ -0.24
CLSTN1-202ENST00000377298 TLN1Q9Y490 2541 aaKnown RBP13.52□□□□□ -0.25
CLSTN1-202ENST00000377298 CDSNQ15517 529 aa13.52□□□□□ -0.25
CLSTN1-202ENST00000377298 RNASE8Q8TDE3 154 aaKnown RBP13.52□□□□□ -0.25
CLSTN1-202ENST00000377298 SMIM9A6NGZ8 99 aa13.52□□□□□ -0.25
CLSTN1-202ENST00000377298 LY6G6DO95868 133 aa13.52□□□□□ -0.25
CLSTN1-202ENST00000377298 ZNF80P51504 273 aaPredicted RBP13.52□□□□□ -0.25
CLSTN1-202ENST00000377298 ANKRD39Q53RE8 183 aa13.52□□□□□ -0.25
CLSTN1-202ENST00000377298 VSIG2Q96IQ7 327 aa13.52□□□□□ -0.25
CLSTN1-202ENST00000377298 ETDCA0A1B0GVM5 59 aa13.51□□□□□ -0.25
CLSTN1-202ENST00000377298 CFC1BP0CG36 223 aa13.51□□□□□ -0.25
CLSTN1-202ENST00000377298 CFC1P0CG37 223 aa13.51□□□□□ -0.25
CLSTN1-202ENST00000377298 C11orf45Q8TAV5 145 aa13.51□□□□□ -0.25
CLSTN1-202ENST00000377298 COX7B2Q8TF08 81 aa13.51□□□□□ -0.25
CLSTN1-202ENST00000377298 PLA2G2AP14555 144 aa13.5□□□□□ -0.25
CLSTN1-202ENST00000377298 YPEL4Q96NS1 127 aa13.49□□□□□ -0.25
CLSTN1-202ENST00000377298 C20orf203Q8NBC4 194 aa13.49□□□□□ -0.25
CLSTN1-202ENST00000377298 BAALCQ8WXS3 180 aa13.49□□□□□ -0.25
CLSTN1-202ENST00000377298 IGLV2-8P01709 118 aa13.49□□□□□ -0.25
CLSTN1-202ENST00000377298 PSMB8P28062 276 aa13.49□□□□□ -0.25
CLSTN1-202ENST00000377298 DSCR8Q96T75 97 aa13.49□□□□□ -0.25
CLSTN1-202ENST00000377298 MLST8Q9BVC4 326 aa13.49□□□□□ -0.25
CLSTN1-202ENST00000377298 ZNF702PQ9H963 129 aa13.49□□□□□ -0.25
CLSTN1-202ENST00000377298 UBL5Q9BZL1 73 aa13.48□□□□□ -0.25
CLSTN1-202ENST00000377298 CARD19Q96LW7 228 aa13.48□□□□□ -0.25
CLSTN1-202ENST00000377298 NDUFA1O15239 70 aa13.48□□□□□ -0.25
CLSTN1-202ENST00000377298 CXCL5P42830 114 aa13.47□□□□□ -0.25
CLSTN1-202ENST00000377298 SRCAPQ6ZRS2 3230 aa13.47□□□□□ -0.25
CLSTN1-202ENST00000377298 ARHGAP21Q5T5U3 1957 aa13.47□□□□□ -0.25
CLSTN1-202ENST00000377298 SORL1Q92673 2214 aa13.47□□□□□ -0.25
CLSTN1-202ENST00000377298 TAX1BP3O14907 124 aa13.47□□□□□ -0.25
CLSTN1-202ENST00000377298 LYRM9A8MSI8 78 aa13.47□□□□□ -0.25
CLSTN1-202ENST00000377298 KLK12Q9UKR0 248 aa13.47□□□□□ -0.25
CLSTN1-202ENST00000377298 A0A1B0GXF2 115 aa13.46□□□□□ -0.25
CLSTN1-202ENST00000377298 IGLC6P0CF74 106 aa13.46□□□□□ -0.25
CLSTN1-202ENST00000377298 SND1-IT1Q9HBX3 110 aa13.46□□□□□ -0.25
CLSTN1-202ENST00000377298 C10orf99Q6UWK7 81 aa13.46□□□□□ -0.26
CLSTN1-202ENST00000377298 LINC00322Q6ZN03 302 aaPredicted RBP13.46□□□□□ -0.26
CLSTN1-202ENST00000377298 DEFB105AQ8NG35 78 aa13.46□□□□□ -0.26
CLSTN1-202ENST00000377298 Q6ZTI0 123 aa13.46□□□□□ -0.26
CLSTN1-202ENST00000377298 COL5A1P20908 1838 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-202ENST00000377298 C20orf173Q96LM9 149 aa13.45□□□□□ -0.26
CLSTN1-202ENST00000377298 HILS1P60008 231 aa13.45□□□□□ -0.26
CLSTN1-202ENST00000377298 HAMPP81172 84 aa13.45□□□□□ -0.26
CLSTN1-202ENST00000377298 LINC01006Q8NI28 216 aa13.45□□□□□ -0.26
CLSTN1-202ENST00000377298 ABCA2Q9BZC7 2435 aa13.45□□□□□ -0.26
CLSTN1-202ENST00000377298 TP53TG3Q9ULZ0 132 aa13.44□□□□□ -0.26
CLSTN1-202ENST00000377298 C11orf86A6NJI1 115 aa13.44□□□□□ -0.26
CLSTN1-202ENST00000377298 NACAE9PAV3 2078 aa13.44□□□□□ -0.26
CLSTN1-202ENST00000377298 RNF183Q96D59 192 aa13.44□□□□□ -0.26
CLSTN1-202ENST00000377298 E9PLD3 99 aa13.43□□□□□ -0.26
CLSTN1-202ENST00000377298 FAM222AQ5U5X8 452 aa13.43□□□□□ -0.26
CLSTN1-202ENST00000377298 SPAG11BQ08648 103 aa13.43□□□□□ -0.26
CLSTN1-202ENST00000377298 SPATA25Q9BR10 227 aa13.43□□□□□ -0.26
CLSTN1-202ENST00000377298 MUSTN1Q8IVN3 82 aa13.42□□□□□ -0.26
CLSTN1-202ENST00000377298 H0YGX0 51 aa13.41□□□□□ -0.26
CLSTN1-202ENST00000377298 ORMDL1Q9P0S3 153 aa13.41□□□□□ -0.26
CLSTN1-202ENST00000377298 IGHV4-4A0A075B6R2 117 aa13.41□□□□□ -0.26
CLSTN1-202ENST00000377298 IGLV1-40P01703 118 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms