RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ADARB2-AS1A8MUL3 147 aa12.26□□□□□ -0.45
TRIM39-201ENST00000376656 M0QY20 66 aa12.26□□□□□ -0.45
TRIM39-201ENST00000376656 SHISA2Q6UWI4 295 aa12.26□□□□□ -0.45
TRIM39-201ENST00000376656 MDFICQ9P1T7 246 aa12.26□□□□□ -0.45
TRIM39-201ENST00000376656 M0R2P5 195 aa12.26□□□□□ -0.45
TRIM39-201ENST00000376656 LMO4P61968 165 aa12.26□□□□□ -0.45
TRIM39-201ENST00000376656 NSUN5P1Q3KNT7 163 aa12.26□□□□□ -0.45
TRIM39-201ENST00000376656 NDUFV3P56181 108 aaKnown RBP12.25□□□□□ -0.45
TRIM39-201ENST00000376656 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
TRIM39-201ENST00000376656 BPESC1Q9GZL8 116 aa12.25□□□□□ -0.45
TRIM39-201ENST00000376656 TRIAP1O43715 76 aa12.24□□□□□ -0.45
TRIM39-201ENST00000376656 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.24□□□□□ -0.45
TRIM39-201ENST00000376656 RHOHQ15669 191 aa12.24□□□□□ -0.45
TRIM39-201ENST00000376656 BRD3OSQ6XYD6 125 aa12.24□□□□□ -0.45
TRIM39-201ENST00000376656 C20orf203Q8NBC4 194 aa12.24□□□□□ -0.45
TRIM39-201ENST00000376656 ODF3Q96PU9 254 aa12.24□□□□□ -0.45
TRIM39-201ENST00000376656 UBTD1Q9HAC8 227 aa12.24□□□□□ -0.45
TRIM39-201ENST00000376656 IGHV3-16A0A0C4DH30 117 aa12.23□□□□□ -0.45
TRIM39-201ENST00000376656 IGLV4-3A0A075B6K6 122 aa12.23□□□□□ -0.45
TRIM39-201ENST00000376656 TRAV12-2A0A075B6T6 113 aa12.23□□□□□ -0.45
TRIM39-201ENST00000376656 PF4V1P10720 104 aa12.23□□□□□ -0.45
TRIM39-201ENST00000376656 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
TRIM39-201ENST00000376656 IGKV3-20P01619 116 aa12.22□□□□□ -0.45
TRIM39-201ENST00000376656 COL6A6A6NMZ7 2263 aa12.22□□□□□ -0.45
TRIM39-201ENST00000376656 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
TRIM39-201ENST00000376656 TRBV10-2A0A0K0K1G8 114 aa12.22□□□□□ -0.45
TRIM39-201ENST00000376656 LY6EQ16553 131 aa12.22□□□□□ -0.45
TRIM39-201ENST00000376656 SPXQ9BT56 116 aa12.22□□□□□ -0.45
TRIM39-201ENST00000376656 SPTAN1Q13813 2472 aaKnown RBP12.22□□□□□ -0.45
TRIM39-201ENST00000376656 CCDC179H3BU77 68 aa12.22□□□□□ -0.45
TRIM39-201ENST00000376656 K7ENP7 123 aa12.22□□□□□ -0.45
TRIM39-201ENST00000376656 TRBV30A0A0K0K1B3 111 aa12.21□□□□□ -0.45
TRIM39-201ENST00000376656 IGHV3-30-3P0DP02 117 aa12.21□□□□□ -0.45
TRIM39-201ENST00000376656 A0A0J9YX75 114 aa12.21□□□□□ -0.45
TRIM39-201ENST00000376656 RPL13AP40429 203 aaKnown RBP12.21□□□□□ -0.45
TRIM39-201ENST00000376656 LITAFQ99732 161 aa12.21□□□□□ -0.45
TRIM39-201ENST00000376656 DAZ1Q9NQZ3 744 aaKnown RBP12.21□□□□□ -0.45
TRIM39-201ENST00000376656 TTC32Q5I0X7 151 aa12.21□□□□□ -0.46
TRIM39-201ENST00000376656 C15orf53Q8NAA6 179 aa12.21□□□□□ -0.46
TRIM39-201ENST00000376656 DCANP1Q8TF63 244 aa12.21□□□□□ -0.46
TRIM39-201ENST00000376656 USMG5Q96IX5 58 aa12.21□□□□□ -0.46
TRIM39-201ENST00000376656 PRRC2AP48634 2157 aaKnown RBP12.2□□□□□ -0.46
TRIM39-201ENST00000376656 H3BMM0 161 aa12.2□□□□□ -0.46
TRIM39-201ENST00000376656 PRSS2P07478 247 aa12.2□□□□□ -0.46
TRIM39-201ENST00000376656 UBE2WQ96B02 151 aa12.2□□□□□ -0.46
TRIM39-201ENST00000376656 TRAV8-3A0A0A6YYJ7 113 aa12.2□□□□□ -0.46
TRIM39-201ENST00000376656 IFITM1P13164 125 aa12.2□□□□□ -0.46
TRIM39-201ENST00000376656 Q6ZSV7 163 aa12.19□□□□□ -0.46
TRIM39-201ENST00000376656 LINC01600Q96MT4 127 aa12.19□□□□□ -0.46
TRIM39-201ENST00000376656 ADAMTSL4-AS1Q5T5F5 129 aa12.19□□□□□ -0.46
TRIM39-201ENST00000376656 ABCA2Q9BZC7 2435 aa12.19□□□□□ -0.46
TRIM39-201ENST00000376656 I3L3M4 83 aa12.19□□□□□ -0.46
TRIM39-201ENST00000376656 ID1P41134 155 aa12.19□□□□□ -0.46
TRIM39-201ENST00000376656 C2orf82Q6UX34 121 aa12.19□□□□□ -0.46
TRIM39-201ENST00000376656 TIMM21Q9BVV7 248 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 ATRXP46100 2492 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 GAGE12JA6NER3 117 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 GAGE7O76087 117 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 GAGE12FP0CL80 117 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 GAGE12GP0CL81 117 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 GAGE12IP0CL82 117 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 NPC2P61916 151 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 GAGE4Q13068 117 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 ICOSQ9Y6W8 199 aa12.18□□□□□ -0.46
TRIM39-201ENST00000376656 H7C423 109 aa12.17□□□□□ -0.46
TRIM39-201ENST00000376656 FAM104AQ969W3 186 aa12.17□□□□□ -0.46
TRIM39-201ENST00000376656 BLCAPP62952 87 aa12.17□□□□□ -0.46
TRIM39-201ENST00000376656 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
TRIM39-201ENST00000376656 CEMP1Q6PRD7 247 aaPredicted RBP12.17□□□□□ -0.46
TRIM39-201ENST00000376656 Q6Q795 121 aa12.17□□□□□ -0.46
TRIM39-201ENST00000376656 VPS13CQ709C8 3753 aa12.17□□□□□ -0.46
TRIM39-201ENST00000376656 IGHG2P01859 326 aa12.16□□□□□ -0.46
TRIM39-201ENST00000376656 A8MZ25 164 aa12.16□□□□□ -0.46
TRIM39-201ENST00000376656 CLEC2BQ92478 149 aa12.16□□□□□ -0.46
TRIM39-201ENST00000376656 CD28P10747 220 aa12.16□□□□□ -0.46
TRIM39-201ENST00000376656 H3BUA1 57 aa12.15□□□□□ -0.46
TRIM39-201ENST00000376656 FOXC1Q12948 553 aa12.15□□□□□ -0.46
TRIM39-201ENST00000376656 BRI3O95415 125 aa12.15□□□□□ -0.46
TRIM39-201ENST00000376656 SPINK13Q1W4C9 94 aa12.15□□□□□ -0.46
TRIM39-201ENST00000376656 IGHV1OR15-1A0A075B7D0 117 aa12.14□□□□□ -0.47
TRIM39-201ENST00000376656 NDUFA12Q9UI09 145 aa12.14□□□□□ -0.47
TRIM39-201ENST00000376656 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
TRIM39-201ENST00000376656 H3BUX3 64 aa12.14□□□□□ -0.47
TRIM39-201ENST00000376656 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
TRIM39-201ENST00000376656 SORL1Q92673 2214 aa12.13□□□□□ -0.47
TRIM39-201ENST00000376656 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
TRIM39-201ENST00000376656 IGHV4-38-2P0DP08 117 aa12.13□□□□□ -0.47
TRIM39-201ENST00000376656 IGHV1-58A0A0C4DH39 117 aa12.13□□□□□ -0.47
TRIM39-201ENST00000376656 DUX3Q96PT4 197 aa12.13□□□□□ -0.47
TRIM39-201ENST00000376656 SPANXDQ9BXN6 97 aa12.13□□□□□ -0.47
TRIM39-201ENST00000376656 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
TRIM39-201ENST00000376656 PROK1P58294 105 aa12.12□□□□□ -0.47
TRIM39-201ENST00000376656 IGLV1-40P01703 118 aa12.12□□□□□ -0.47
TRIM39-201ENST00000376656 MIAQ16674 131 aa12.12□□□□□ -0.47
TRIM39-201ENST00000376656 H3BT86 120 aa12.11□□□□□ -0.47
TRIM39-201ENST00000376656 K7EMT4 169 aa12.11□□□□□ -0.47
TRIM39-201ENST00000376656 PYGO1Q9Y3Y4 419 aa12.11□□□□□ -0.47
TRIM39-201ENST00000376656 COX6CP09669 75 aa12.11□□□□□ -0.47
TRIM39-201ENST00000376656 DOPEY2Q9Y3R5 2298 aa12.1□□□□□ -0.47
TRIM39-201ENST00000376656 A6NDX4 124 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms