RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PLA2G2EQ9NZK7 142 aa8.76□□□□□ -1.01
VCL-202ENST00000372755 ABCA1O95477 2261 aa8.76□□□□□ -1.01
VCL-202ENST00000372755 CACNA1BQ00975 2339 aa8.76□□□□□ -1.01
VCL-202ENST00000372755 DOCK11Q5JSL3 2073 aa8.76□□□□□ -1.01
VCL-202ENST00000372755 SVIPQ8NHG7 77 aa8.76□□□□□ -1.01
VCL-202ENST00000372755 RNF183Q96D59 192 aa8.76□□□□□ -1.01
VCL-202ENST00000372755 CADP27708 2225 aa8.76□□□□□ -1.01
VCL-202ENST00000372755 HIGD2AQ9BW72 106 aa8.75□□□□□ -1.01
VCL-202ENST00000372755 IGLV2-14P01704 120 aa8.75□□□□□ -1.01
VCL-202ENST00000372755 LYPD6Q86Y78 171 aa8.75□□□□□ -1.01
VCL-202ENST00000372755 LRRC75A-AS1Q8N1F1 130 aa8.75□□□□□ -1.01
VCL-202ENST00000372755 SPTBN2O15020 2390 aa8.75□□□□□ -1.01
VCL-202ENST00000372755 E7EUB6 86 aa8.75□□□□□ -1.01
VCL-202ENST00000372755 LINC00269Q8N2A0 174 aa8.75□□□□□ -1.01
VCL-202ENST00000372755 TRAV26-1A0A087WT03 109 aa8.75□□□□□ -1.01
VCL-202ENST00000372755 KMT2EQ8IZD2 1858 aa8.75□□□□□ -1.01
VCL-202ENST00000372755 DOCK9Q9BZ29 2069 aa8.74□□□□□ -1.01
VCL-202ENST00000372755 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
VCL-202ENST00000372755 CEMP1Q6PRD7 247 aaPredicted RBP8.74□□□□□ -1.01
VCL-202ENST00000372755 TSC2P49815 1807 aa8.74□□□□□ -1.01
VCL-202ENST00000372755 HILS1P60008 231 aa8.74□□□□□ -1.01
VCL-202ENST00000372755 CCDC140Q96MF4 163 aa8.74□□□□□ -1.01
VCL-202ENST00000372755 FAM19A1Q7Z5A9 133 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 G3V4G9 280 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 SPATA12Q7Z6I5 190 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
VCL-202ENST00000372755 ODF3BA8MYP8 253 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 Q6ZTI0 123 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 USP17L23D6RBM5 183 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 CRYGDP07320 174 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 DOCK10Q96BY6 2186 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 CACNA1GO43497 2377 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 DIDO1Q9BTC0 2240 aaKnown RBP8.73□□□□□ -1.01
VCL-202ENST00000372755 TCL1BO95988 128 aa8.73□□□□□ -1.01
VCL-202ENST00000372755 PKDREJQ9NTG1 2253 aa8.72□□□□□ -1.01
VCL-202ENST00000372755 WFDC11Q8NEX6 87 aa8.72□□□□□ -1.01
VCL-202ENST00000372755 DOCK8Q8NF50 2099 aa8.72□□□□□ -1.01
VCL-202ENST00000372755 ATP5EP2Q5VTU8 51 aa8.72□□□□□ -1.01
VCL-202ENST00000372755 EML6Q6ZMW3 1958 aa8.72□□□□□ -1.01
VCL-202ENST00000372755 HEATR5AQ86XA9 2040 aa8.72□□□□□ -1.01
VCL-202ENST00000372755 DOCK7Q96N67 2140 aa8.72□□□□□ -1.01
VCL-202ENST00000372755 TRAV23DV6A0A075B6W5 121 aa8.72□□□□□ -1.01
VCL-202ENST00000372755 K7ERS5 55 aa8.72□□□□□ -1.01
VCL-202ENST00000372755 IGKV1D-37A0A075B6S9 117 aa8.71□□□□□ -1.01
VCL-202ENST00000372755 FAM222AQ5U5X8 452 aa8.71□□□□□ -1.01
VCL-202ENST00000372755 A0A1B0GXF2 115 aa8.71□□□□□ -1.02
VCL-202ENST00000372755 TP53TG3Q9ULZ0 132 aa8.71□□□□□ -1.02
VCL-202ENST00000372755 ROS1P08922 2347 aa8.71□□□□□ -1.02
VCL-202ENST00000372755 A0A087WZ39 114 aa8.71□□□□□ -1.02
VCL-202ENST00000372755 Q6YL49 198 aa8.71□□□□□ -1.02
VCL-202ENST00000372755 BRK1Q8WUW1 75 aa8.71□□□□□ -1.02
VCL-202ENST00000372755 P0DMU3 169 aa8.7□□□□□ -1.02
VCL-202ENST00000372755 FAM231AP0DMU4 169 aa8.7□□□□□ -1.02
VCL-202ENST00000372755 FAM231CP0DMU5 169 aa8.7□□□□□ -1.02
VCL-202ENST00000372755 ZNF80P51504 273 aaPredicted RBP8.7□□□□□ -1.02
VCL-202ENST00000372755 RNASE8Q8TDE3 154 aaKnown RBP8.7□□□□□ -1.02
VCL-202ENST00000372755 ZNF407Q9C0G0 2248 aa8.7□□□□□ -1.02
VCL-202ENST00000372755 IGF1P05019 195 aa8.7□□□□□ -1.02
VCL-202ENST00000372755 PTH2Q96A98 100 aa8.7□□□□□ -1.02
VCL-202ENST00000372755 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
VCL-202ENST00000372755 IBA57-AS1B1ANH7 110 aa8.69□□□□□ -1.02
VCL-202ENST00000372755 SPRY4Q9C004 299 aa8.69□□□□□ -1.02
VCL-202ENST00000372755 IGLC6P0CF74 106 aa8.69□□□□□ -1.02
VCL-202ENST00000372755 K7EQG2 157 aa8.69□□□□□ -1.02
VCL-202ENST00000372755 LINC00467Q9BRT7 94 aa8.69□□□□□ -1.02
VCL-202ENST00000372755 C11orf1Q9H5F2 150 aa8.69□□□□□ -1.02
VCL-202ENST00000372755 LINC00574Q9H8X3 128 aa8.69□□□□□ -1.02
VCL-202ENST00000372755 LMO4P61968 165 aa8.69□□□□□ -1.02
VCL-202ENST00000372755 DEFB114Q30KQ6 69 aa8.68□□□□□ -1.02
VCL-202ENST00000372755 NEXN-AS1Q8NBZ9 246 aa8.68□□□□□ -1.02
VCL-202ENST00000372755 HELZP42694 1942 aaKnown RBP8.68□□□□□ -1.02
VCL-202ENST00000372755 NCOR1O75376 2440 aa8.68□□□□□ -1.02
VCL-202ENST00000372755 MGAMO43451 1857 aa8.68□□□□□ -1.02
VCL-202ENST00000372755 FRMD6-AS1P0C7T7 363 aa8.68□□□□□ -1.02
VCL-202ENST00000372755 NCKAP5O14513 1909 aa8.68□□□□□ -1.02
VCL-202ENST00000372755 SPANXB1Q9NS25 103 aaPredicted RBP8.68□□□□□ -1.02
VCL-202ENST00000372755 RLFQ13129 1914 aa8.68□□□□□ -1.02
VCL-202ENST00000372755 TMEM223A0PJW6 202 aa8.68□□□□□ -1.02
VCL-202ENST00000372755 MSMPQ1L6U9 139 aa8.68□□□□□ -1.02
VCL-202ENST00000372755 MYLKQ15746 1914 aa8.67□□□□□ -1.02
VCL-202ENST00000372755 TANC1Q9C0D5 1861 aa8.67□□□□□ -1.02
VCL-202ENST00000372755 P0C879 139 aa8.67□□□□□ -1.02
VCL-202ENST00000372755 NLRC5Q86WI3 1866 aa8.67□□□□□ -1.02
VCL-202ENST00000372755 SPTSSBQ8NFR3 76 aa8.67□□□□□ -1.02
VCL-202ENST00000372755 IGHV4-31P0DP07 118 aa8.67□□□□□ -1.02
VCL-202ENST00000372755 A0A096LNI7 61 aa8.67□□□□□ -1.02
VCL-202ENST00000372755 LRCOL1A6NCL2 159 aa8.67□□□□□ -1.02
VCL-202ENST00000372755 MIFP14174 115 aa8.67□□□□□ -1.02
VCL-202ENST00000372755 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
VCL-202ENST00000372755 MALRD1Q5VYJ5 2156 aa8.66□□□□□ -1.02
VCL-202ENST00000372755 PRR15LQ9BU68 103 aa8.66□□□□□ -1.02
VCL-202ENST00000372755 CDKN2A-AS1Q9UH64 79 aa8.66□□□□□ -1.02
VCL-202ENST00000372755 Q8NA96 180 aa8.66□□□□□ -1.02
VCL-202ENST00000372755 FAM236DA0A1B0GTK5 79 aa8.66□□□□□ -1.02
VCL-202ENST00000372755 UQCRQO14949 82 aa8.66□□□□□ -1.02
VCL-202ENST00000372755 FAM236CP0DP71 79 aa8.66□□□□□ -1.02
VCL-202ENST00000372755 IGLV2-8P01709 118 aa8.65□□□□□ -1.02
VCL-202ENST00000372755 TNRC6AQ8NDV7 1962 aaKnown RBP8.65□□□□□ -1.02
VCL-202ENST00000372755 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.02
VCL-202ENST00000372755 C20orf197Q8N268 126 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms