RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 IGHG2P01859 326 aa12.94□□□□□ -0.34
CHUK-201ENST00000370397 H3BUA1 57 aa12.94□□□□□ -0.34
CHUK-201ENST00000370397 FAM159AQ6UWV7 190 aa12.93□□□□□ -0.34
CHUK-201ENST00000370397 TRBV30A0A0K0K1B3 111 aa12.93□□□□□ -0.34
CHUK-201ENST00000370397 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
CHUK-201ENST00000370397 USMG5Q96IX5 58 aa12.93□□□□□ -0.34
CHUK-201ENST00000370397 ZFAND6Q6FIF0 208 aa12.93□□□□□ -0.34
CHUK-201ENST00000370397 ZNF256Q9Y2P7 627 aaPredicted RBP12.93□□□□□ -0.34
CHUK-201ENST00000370397 IGF2RP11717 2491 aa12.92□□□□□ -0.34
CHUK-201ENST00000370397 TRAV12-3A0A0B4J271 114 aa12.92□□□□□ -0.34
CHUK-201ENST00000370397 TRIAP1O43715 76 aa12.92□□□□□ -0.34
CHUK-201ENST00000370397 IGKV3-7A0A075B6H7 116 aa12.92□□□□□ -0.34
CHUK-201ENST00000370397 LINC01620Q4KN68 170 aa12.92□□□□□ -0.34
CHUK-201ENST00000370397 AKAP9Q99996 3911 aa12.92□□□□□ -0.34
CHUK-201ENST00000370397 A0A0J9YXV3 536 aa12.91□□□□□ -0.34
CHUK-201ENST00000370397 TEX49A0A1B0GTD5 131 aa12.91□□□□□ -0.34
CHUK-201ENST00000370397 DAZ1Q9NQZ3 744 aaKnown RBP12.91□□□□□ -0.34
CHUK-201ENST00000370397 TRAV2A0A0B4J234 112 aa12.91□□□□□ -0.34
CHUK-201ENST00000370397 SCGB1C2P0DMR2 95 aa12.91□□□□□ -0.34
CHUK-201ENST00000370397 ADAMTSL4-AS1Q5T5F5 129 aa12.91□□□□□ -0.34
CHUK-201ENST00000370397 ANAPC13Q9BS18 74 aa12.91□□□□□ -0.34
CHUK-201ENST00000370397 NCOR2Q9Y618 2525 aa12.91□□□□□ -0.34
CHUK-201ENST00000370397 PRRC2AP48634 2157 aaKnown RBP12.91□□□□□ -0.34
CHUK-201ENST00000370397 NTN5Q8WTR8 489 aaPredicted RBP12.9□□□□□ -0.34
CHUK-201ENST00000370397 IGHV3OR16-10A0A075B7F0 116 aa12.9□□□□□ -0.34
CHUK-201ENST00000370397 IGHV3-64A0A075B6Q5 118 aa12.89□□□□□ -0.35
CHUK-201ENST00000370397 MRPS36P82909 103 aaKnown RBP12.89□□□□□ -0.35
CHUK-201ENST00000370397 EDA2RQ9HAV5 297 aa12.89□□□□□ -0.35
CHUK-201ENST00000370397 IGHV3-30-3P0DP02 117 aa12.89□□□□□ -0.35
CHUK-201ENST00000370397 RPL11P62913 178 aaKnown RBP12.89□□□□□ -0.35
CHUK-201ENST00000370397 Q6Q795 121 aa12.89□□□□□ -0.35
CHUK-201ENST00000370397 BRD3OSQ6XYD6 125 aa12.89□□□□□ -0.35
CHUK-201ENST00000370397 TEX29Q8N6K0 151 aa12.89□□□□□ -0.35
CHUK-201ENST00000370397 FAM74A4Q5TZK3 123 aa12.89□□□□□ -0.35
CHUK-201ENST00000370397 RNF152Q8N8N0 203 aa12.89□□□□□ -0.35
CHUK-201ENST00000370397 F5H697 171 aa12.88□□□□□ -0.35
CHUK-201ENST00000370397 NDUFV3P56181 108 aaKnown RBP12.88□□□□□ -0.35
CHUK-201ENST00000370397 TRBV10-2A0A0K0K1G8 114 aa12.88□□□□□ -0.35
CHUK-201ENST00000370397 A6NDX4 124 aa12.88□□□□□ -0.35
CHUK-201ENST00000370397 K7EMT4 169 aa12.88□□□□□ -0.35
CHUK-201ENST00000370397 ATXN8Q156A1 80 aa12.88□□□□□ -0.35
CHUK-201ENST00000370397 BLCAPP62952 87 aa12.87□□□□□ -0.35
CHUK-201ENST00000370397 GAGE5Q13069 117 aa12.87□□□□□ -0.35
CHUK-201ENST00000370397 GAGE6Q13070 117 aa12.87□□□□□ -0.35
CHUK-201ENST00000370397 PYGO1Q9Y3Y4 419 aa12.87□□□□□ -0.35
CHUK-201ENST00000370397 TRAV12-2A0A075B6T6 113 aa12.87□□□□□ -0.35
CHUK-201ENST00000370397 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.87□□□□□ -0.35
CHUK-201ENST00000370397 H7C423 109 aa12.87□□□□□ -0.35
CHUK-201ENST00000370397 KLRB1Q12918 225 aa12.87□□□□□ -0.35
CHUK-201ENST00000370397 SPANXDQ9BXN6 97 aa12.87□□□□□ -0.35
CHUK-201ENST00000370397 SPANXCQ9NY87 97 aa12.87□□□□□ -0.35
CHUK-201ENST00000370397 DOPEY2Q9Y3R5 2298 aa12.86□□□□□ -0.35
CHUK-201ENST00000370397 SS18L2Q9UHA2 77 aa12.86□□□□□ -0.35
CHUK-201ENST00000370397 ATRXP46100 2492 aa12.86□□□□□ -0.35
CHUK-201ENST00000370397 I3L3M4 83 aa12.86□□□□□ -0.35
CHUK-201ENST00000370397 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
CHUK-201ENST00000370397 Q6ZSV7 163 aa12.86□□□□□ -0.35
CHUK-201ENST00000370397 H7C2G1 150 aa12.85□□□□□ -0.35
CHUK-201ENST00000370397 IGHV4-38-2P0DP08 117 aa12.85□□□□□ -0.35
CHUK-201ENST00000370397 ZNF56Q15929 161 aa12.85□□□□□ -0.35
CHUK-201ENST00000370397 NBASA2RRP1 2371 aa12.85□□□□□ -0.35
CHUK-201ENST00000370397 HIVEP3Q5T1R4 2406 aa12.85□□□□□ -0.35
CHUK-201ENST00000370397 ADARB2-AS1A8MUL3 147 aa12.85□□□□□ -0.35
CHUK-201ENST00000370397 TRAV8-3A0A0A6YYJ7 113 aa12.84□□□□□ -0.35
CHUK-201ENST00000370397 RBMY1A1P0DJD3 496 aaKnown RBP12.84□□□□□ -0.35
CHUK-201ENST00000370397 RBMY1CP0DJD4 496 aa12.84□□□□□ -0.35
CHUK-201ENST00000370397 RBMY1FQ15415 496 aaKnown RBP12.84□□□□□ -0.35
CHUK-201ENST00000370397 Q9UF83 564 aa12.83□□□□□ -0.36
CHUK-201ENST00000370397 ITPR1Q14643 2758 aa12.83□□□□□ -0.36
CHUK-201ENST00000370397 CCDC179H3BU77 68 aa12.83□□□□□ -0.36
CHUK-201ENST00000370397 ICOSQ9Y6W8 199 aa12.83□□□□□ -0.36
CHUK-201ENST00000370397 SPTAN1Q13813 2472 aaKnown RBP12.82□□□□□ -0.36
CHUK-201ENST00000370397 IGHV4-39P01824 125 aa12.82□□□□□ -0.36
CHUK-201ENST00000370397 CHD8Q9HCK8 2581 aa12.82□□□□□ -0.36
CHUK-201ENST00000370397 UBTD1Q9HAC8 227 aa12.82□□□□□ -0.36
CHUK-201ENST00000370397 IGHV1OR15-1A0A075B7D0 117 aa12.82□□□□□ -0.36
CHUK-201ENST00000370397 IGHV1-58A0A0C4DH39 117 aa12.82□□□□□ -0.36
CHUK-201ENST00000370397 PF4V1P10720 104 aa12.82□□□□□ -0.36
CHUK-201ENST00000370397 B5MCH6 92 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 CEMP1Q6PRD7 247 aaPredicted RBP12.81□□□□□ -0.36
CHUK-201ENST00000370397 NBPF19A0A087WUL8 3843 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 GAGE2BQ13066 116 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 LY6EQ16553 131 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 GAGE2EQ4V326 116 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 SPXQ9BT56 116 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 GAGE2DQ9UEU5 116 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 A8MZ25 164 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 K7EQG2 157 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 MIAQ16674 131 aa12.81□□□□□ -0.36
CHUK-201ENST00000370397 VSIG2Q96IQ7 327 aa12.8□□□□□ -0.36
CHUK-201ENST00000370397 PSMB8P28062 276 aa12.8□□□□□ -0.36
CHUK-201ENST00000370397 ID1P41134 155 aa12.8□□□□□ -0.36
CHUK-201ENST00000370397 PROK1P58294 105 aa12.8□□□□□ -0.36
CHUK-201ENST00000370397 TIMM21Q9BVV7 248 aa12.8□□□□□ -0.36
CHUK-201ENST00000370397 H3BMM0 161 aa12.8□□□□□ -0.36
CHUK-201ENST00000370397 H3BUX3 64 aa12.8□□□□□ -0.36
CHUK-201ENST00000370397 UBE2WQ96B02 151 aa12.8□□□□□ -0.36
CHUK-201ENST00000370397 MAP1AP78559 2803 aaPredicted RBP12.79□□□□□ -0.36
CHUK-201ENST00000370397 SNCGO76070 127 aa12.79□□□□□ -0.36
CHUK-201ENST00000370397 CHCHD7Q9BUK0 85 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms