RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 INS-IGF2F8WCM5 200 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 TWIST1Q15672 202 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 ASPHD1Q5U4P2 390 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 COX8CQ7Z4L0 72 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 C15orf53Q8NAA6 179 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 E7EUB6 86 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 P01737 135 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 TMEM258P61165 79 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 SRSF2Q01130 221 aaKnown RBP5.18□□□□□ -1.58
CSDE1-204ENST00000369530 TRPT1Q86TN4 253 aaKnown RBP5.18□□□□□ -1.58
CSDE1-204ENST00000369530 PGLYRP4Q96LB8 373 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 TRAV12-1A0A0B4J245 112 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 H3BTX0 84 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 FCER1GP30273 86 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 CXCL5P42830 114 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 Q8N1Y9 231 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 C5orf56Q8N8D9 126 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 STAB1Q9NY15 2570 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 HSPG2P98160 4391 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 SONP18583 2426 aaKnown RBP5.18□□□□□ -1.58
CSDE1-204ENST00000369530 IGHV3-35A0A0C4DH35 117 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 PF4P02776 101 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 LYZP61626 148 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 UBE2L3P68036 154 aaKnown RBP5.18□□□□□ -1.58
CSDE1-204ENST00000369530 FAM104BQ5XKR9 115 aa5.18□□□□□ -1.58
CSDE1-204ENST00000369530 OOSP1A8MZH6 123 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 PRB4P10163 310 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-204ENST00000369530 SAA4P35542 130 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 WT1-ASQ06250 92 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 ZFP2Q6ZN57 461 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 SRSF12Q8WXF0 261 aaKnown RBP5.17□□□□□ -1.58
CSDE1-204ENST00000369530 SLC25A39Q9BZJ4 359 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-204ENST00000369530 TGP01266 2768 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 HERC2O95714 4834 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 OVOL1O14753 267 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 SLC25A20O43772 301 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 RNASE2P10153 161 aaKnown RBP5.17□□□□□ -1.58
CSDE1-204ENST00000369530 COX7CP15954 63 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 PSMB2P49721 201 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 CD69Q07108 199 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 PMVKQ15126 192 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 NDUFA11Q86Y39 141 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 TMEM167AQ8TBQ9 72 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 DPH3Q96FX2 82 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 IGKV1OR2-108A0A075B7D4 117 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 PLNP26678 52 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 ECSCRQ19T08 205 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 C5orf38Q86SI9 138 aa5.17□□□□□ -1.58
CSDE1-204ENST00000369530 TRAV8-4A0A0B4J246 113 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 RS1O15537 224 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 IGHV3-23P01764 117 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 IGHV4-59P01825 116 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 C10orf113Q5VZT2 155 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 ORMDL3Q8N138 153 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 HIST1H4GQ99525 98 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 BIRC6Q9NR09 4857 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 IGHV3OR16-8A0A075B7F1 116 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 IGLV2-11P01706 119 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 ACYP1P07311 99 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 C2orf83Q53S99 150 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 TMEM170BQ5T4T1 132 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 C9orf153Q5TBE3 101 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 Q8N9W7 124 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 CHCHD5Q9BSY4 110 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 NDUFA4L2Q9NRX3 87 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 IGLV2-18A0A075B6J9 118 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 TRAV2A0A0B4J234 112 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 Q86TA4 180 aa5.16□□□□□ -1.58
CSDE1-204ENST00000369530 TRAV8-2A0A0B4J237 113 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 LINC01549A6NIU2 74 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 NBR2O15453 112 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 OXTP01178 125 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 IGHG2P01859 326 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 PSMB8P28062 276 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 ZC2HC1BQ5TFG8 222 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 BRD3OSQ6XYD6 125 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 LY6EQ16553 131 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 C10orf126Q8N4M7 172 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 THAP8Q8NA92 274 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 CNFNQ9BYD5 112 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 TTTY13Q9BZ97 58 aa5.15□□□□□ -1.58
CSDE1-204ENST00000369530 RBAKDNA6NC62 111 aa5.15□□□□□ -1.59
CSDE1-204ENST00000369530 PYYP10082 97 aa5.15□□□□□ -1.59
CSDE1-204ENST00000369530 LINC00527Q9UJ94 153 aa5.15□□□□□ -1.59
CSDE1-204ENST00000369530 NOTCH3Q9UM47 2321 aa5.15□□□□□ -1.59
CSDE1-204ENST00000369530 TRAV40A0A0B4J280 105 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 TRBV10-2A0A0K0K1G8 114 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 ARMS2P0C7Q2 107 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 LINC00305Q7Z4B0 112 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 UPK3BQ9BT76 320 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 PAXXQ9BUH6 204 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 AGPAT4-IT1Q9H0P7 198 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 NXT2Q9NPJ8 142 aaKnown RBP5.14□□□□□ -1.59
CSDE1-204ENST00000369530 COL6A5A8TX70 2615 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 PGPA6NDG6 321 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 H3BT86 120 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 AMN1Q8IY45 258 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 ASCL2Q99929 193 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 D6R8Y8 96 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 TCRAP04437 139 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms