RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NEXN-AS1Q8NBZ9 246 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 LY6LH3BQJ8 138 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 C20orf203Q8NBC4 194 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 TP73-AS1Q9UF72 201 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 SIRPDQ9H106 197 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 TRBV7-3A0A075B6L6 115 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 F6UB75 175 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 NSUN5P1Q3KNT7 163 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 TRAV25A0A0B4J276 109 aa9.02□□□□□ -0.96
CDC42BPA-202ENST00000366764 AJUBAQ96IF1 538 aa9.02□□□□□ -0.96
CDC42BPA-202ENST00000366764 ORMDL1Q9P0S3 153 aa9.02□□□□□ -0.96
CDC42BPA-202ENST00000366764 SP5Q6BEB4 398 aaPredicted RBP9.02□□□□□ -0.96
CDC42BPA-202ENST00000366764 MUSTN1Q8IVN3 82 aa9.02□□□□□ -0.96
CDC42BPA-202ENST00000366764 DNAH12Q6ZR08 3092 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 Q8N1Y9 231 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 A0A0J9YXV3 536 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 LINC00310P59036 64 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 A0A0J9YXY3 114 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 DEFB130BP0DP73 79 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 DEFB130AP0DP74 79 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGHV3-16A0A0C4DH30 117 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 C1orf229Q6ZS94 237 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 DSCR8Q96T75 97 aa9.02□□□□□ -0.97
CDC42BPA-202ENST00000366764 C2orf91Q6ZV80 131 aa9.01□□□□□ -0.97
CDC42BPA-202ENST00000366764 CCDC140Q96MF4 163 aa9.01□□□□□ -0.97
CDC42BPA-202ENST00000366764 EPG5Q9HCE0 2579 aa9.01□□□□□ -0.97
CDC42BPA-202ENST00000366764 TRBV10-1A0A0K0K1A3 114 aa9.01□□□□□ -0.97
CDC42BPA-202ENST00000366764 F8WEM9 126 aa9.01□□□□□ -0.97
CDC42BPA-202ENST00000366764 MRPL23Q16540 153 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-202ENST00000366764 LOXL1Q08397 574 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-202ENST00000366764 Q6ZUT4 128 aa9.01□□□□□ -0.97
CDC42BPA-202ENST00000366764 A0A0J9YX75 114 aa9□□□□□ -0.97
CDC42BPA-202ENST00000366764 APOC4P55056 127 aa9□□□□□ -0.97
CDC42BPA-202ENST00000366764 RPL39P62891 51 aaKnown RBP9□□□□□ -0.97
CDC42BPA-202ENST00000366764 C16orf74Q96GX8 76 aa9□□□□□ -0.97
CDC42BPA-202ENST00000366764 ZNF80P51504 273 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
CDC42BPA-202ENST00000366764 U3KQE9 123 aa9□□□□□ -0.97
CDC42BPA-202ENST00000366764 GRNP28799 593 aaKnown RBP9□□□□□ -0.97
CDC42BPA-202ENST00000366764 MIAQ16674 131 aa9□□□□□ -0.97
CDC42BPA-202ENST00000366764 K7EQD1 137 aa9□□□□□ -0.97
CDC42BPA-202ENST00000366764 PFN2P35080 140 aa9□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGF1P05019 195 aa9□□□□□ -0.97
CDC42BPA-202ENST00000366764 TINCRA0A1B0GVN0 87 aa8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 RNF223E7ERA6 249 aa8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 CRLF1O75462 422 aa8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 ZFP36P26651 326 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 TTTY13Q9BZ97 58 aa8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 LGALS9O00182 355 aa8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 P0DMU3 169 aa8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 FAM231AP0DMU4 169 aa8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 FAM231CP0DMU5 169 aa8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 ZFAND3Q9H8U3 227 aa8.99□□□□□ -0.97
CDC42BPA-202ENST00000366764 C10orf105Q8TEF2 133 aa8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 B5MCH6 92 aa8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGHV3-38A0A0C4DH36 116 aa8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGKV2-29A2NJV5 120 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 CXCL5P42830 114 aa8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 DAD1P61803 113 aa8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 CRIP1P50238 77 aa8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 SND1-IT1Q9HBX3 110 aa8.98□□□□□ -0.97
CDC42BPA-202ENST00000366764 RNF185Q96GF1 192 aa8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 ZNF561-AS1K7EIQ3 104 aa8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 COL27A1Q8IZC6 1860 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGHV4-59P01825 116 aa8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 SMIM20Q8N5G0 67 aa8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 PDE6GP18545 87 aa8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 Q8N976 141 aa8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 IGHV4-61A0A0C4DH41 118 aa8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 TCL1BO95988 128 aa8.97□□□□□ -0.97
CDC42BPA-202ENST00000366764 COX8CQ7Z4L0 72 aa8.96□□□□□ -0.97
CDC42BPA-202ENST00000366764 JMJD7-PLA2G4BH0Y9G9 81 aa8.96□□□□□ -0.98
CDC42BPA-202ENST00000366764 IGHV4OR15-8A0A075B7B6 117 aa8.96□□□□□ -0.98
CDC42BPA-202ENST00000366764 A0A087WW49 117 aa8.96□□□□□ -0.98
CDC42BPA-202ENST00000366764 NRACQ8N912 160 aa8.96□□□□□ -0.98
CDC42BPA-202ENST00000366764 RNASE13Q5GAN3 156 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-202ENST00000366764 Q8NA96 180 aa8.96□□□□□ -0.98
CDC42BPA-202ENST00000366764 ZFAND2AQ8N6M9 145 aa8.96□□□□□ -0.98
CDC42BPA-202ENST00000366764 USP24Q9UPU5 2620 aa8.96□□□□□ -0.98
CDC42BPA-202ENST00000366764 ADORA2A-AS1P86434 159 aa8.95□□□□□ -0.98
CDC42BPA-202ENST00000366764 TRBV27A0A0K0K1C4 114 aa8.95□□□□□ -0.98
CDC42BPA-202ENST00000366764 BLCAPP62952 87 aa8.95□□□□□ -0.98
CDC42BPA-202ENST00000366764 DEFB112Q30KQ8 113 aa8.95□□□□□ -0.98
CDC42BPA-202ENST00000366764 LINC00643Q86TS7 51 aa8.95□□□□□ -0.98
CDC42BPA-202ENST00000366764 IGHV4-38-2P0DP08 117 aa8.95□□□□□ -0.98
CDC42BPA-202ENST00000366764 TIMM17BO60830 172 aa8.95□□□□□ -0.98
CDC42BPA-202ENST00000366764 TRBV6-5A0A0K0K1A5 114 aa8.95□□□□□ -0.98
CDC42BPA-202ENST00000366764 NOP10Q9NPE3 64 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-202ENST00000366764 GOLGB1Q14789 3259 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-202ENST00000366764 NDUFV3P56181 108 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-202ENST00000366764 J3KT08 172 aa8.94□□□□□ -0.98
CDC42BPA-202ENST00000366764 UNQ9165/PRO28630Q6UXU0 137 aa8.94□□□□□ -0.98
CDC42BPA-202ENST00000366764 A0A0J9YY99 117 aa8.94□□□□□ -0.98
CDC42BPA-202ENST00000366764 OPRPNQ99935 248 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms