RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 CASP8AP2Q9UKL3 1982 aa12.77□□□□□ -0.37
NID1-202ENST00000366595 LRRC75A-AS1Q8N1F1 130 aa12.76□□□□□ -0.37
NID1-202ENST00000366595 CHD3Q12873 2000 aaKnown RBP12.76□□□□□ -0.37
NID1-202ENST00000366595 SBF2Q86WG5 1849 aa12.76□□□□□ -0.37
NID1-202ENST00000366595 CACNA1GO43497 2377 aa12.76□□□□□ -0.37
NID1-202ENST00000366595 ESM1Q9NQ30 184 aa12.76□□□□□ -0.37
NID1-202ENST00000366595 MRPS36P82909 103 aaKnown RBP12.75□□□□□ -0.37
NID1-202ENST00000366595 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
NID1-202ENST00000366595 CACNA1BQ00975 2339 aa12.75□□□□□ -0.37
NID1-202ENST00000366595 TNRC6AQ8NDV7 1962 aaKnown RBP12.75□□□□□ -0.37
NID1-202ENST00000366595 WT1P19544 449 aaPredicted RBP12.75□□□□□ -0.37
NID1-202ENST00000366595 FAM222AQ5U5X8 452 aa12.75□□□□□ -0.37
NID1-202ENST00000366595 DEFB113Q30KQ7 82 aa12.75□□□□□ -0.37
NID1-202ENST00000366595 EML6Q6ZMW3 1958 aa12.75□□□□□ -0.37
NID1-202ENST00000366595 PIK3CD-AS1Q5SR53 167 aa12.75□□□□□ -0.37
NID1-202ENST00000366595 Q8N9L7 120 aa12.75□□□□□ -0.37
NID1-202ENST00000366595 IGHV4-38-2P0DP08 117 aa12.75□□□□□ -0.37
NID1-202ENST00000366595 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
NID1-202ENST00000366595 MLST8Q9BVC4 326 aa12.74□□□□□ -0.37
NID1-202ENST00000366595 PKDREJQ9NTG1 2253 aa12.74□□□□□ -0.37
NID1-202ENST00000366595 LINC00308Q8TCZ7 52 aa12.74□□□□□ -0.37
NID1-202ENST00000366595 RNF138Q8WVD3 245 aa12.74□□□□□ -0.37
NID1-202ENST00000366595 ZNF524Q96C55 264 aa12.74□□□□□ -0.37
NID1-202ENST00000366595 USF3Q68DE3 2245 aa12.74□□□□□ -0.37
NID1-202ENST00000366595 CNOT1A5YKK6 2376 aaKnown RBP12.74□□□□□ -0.37
NID1-202ENST00000366595 LY6G6EA0A0G2JKS1 128 aa12.74□□□□□ -0.37
NID1-202ENST00000366595 U3KQA8 63 aa12.74□□□□□ -0.37
NID1-202ENST00000366595 REG3AQ06141 175 aa12.73□□□□□ -0.37
NID1-202ENST00000366595 TMEM223A0PJW6 202 aa12.73□□□□□ -0.37
NID1-202ENST00000366595 TIMM17BO60830 172 aa12.73□□□□□ -0.37
NID1-202ENST00000366595 RITA1Q96K30 269 aa12.73□□□□□ -0.37
NID1-202ENST00000366595 COX7CP15954 63 aa12.73□□□□□ -0.37
NID1-202ENST00000366595 DEFB135Q30KP9 77 aa12.72□□□□□ -0.37
NID1-202ENST00000366595 SMAD5-AS1Q9Y6J3 95 aa12.72□□□□□ -0.37
NID1-202ENST00000366595 FAM19A1Q7Z5A9 133 aa12.72□□□□□ -0.37
NID1-202ENST00000366595 TET1Q8NFU7 2136 aa12.72□□□□□ -0.37
NID1-202ENST00000366595 DOCK7Q96N67 2140 aa12.72□□□□□ -0.37
NID1-202ENST00000366595 IGLV1-47P01700 117 aa12.72□□□□□ -0.37
NID1-202ENST00000366595 ACACAQ13085 2346 aa12.72□□□□□ -0.37
NID1-202ENST00000366595 LYPD6Q86Y78 171 aa12.71□□□□□ -0.37
NID1-202ENST00000366595 SMIM26A0A096LP01 95 aa12.71□□□□□ -0.37
NID1-202ENST00000366595 KMT2EQ8IZD2 1858 aa12.71□□□□□ -0.38
NID1-202ENST00000366595 SMIM9A6NGZ8 99 aa12.71□□□□□ -0.38
NID1-202ENST00000366595 TRIAP1O43715 76 aa12.71□□□□□ -0.38
NID1-202ENST00000366595 CCKP06307 115 aa12.71□□□□□ -0.38
NID1-202ENST00000366595 ZNF22P17026 224 aaPredicted RBP12.7□□□□□ -0.38
NID1-202ENST00000366595 SCXQ7RTU7 201 aa12.7□□□□□ -0.38
NID1-202ENST00000366595 WFDC10BQ8IUB3 73 aa12.7□□□□□ -0.38
NID1-202ENST00000366595 CHCHD10Q8WYQ3 142 aaPredicted RBP12.69□□□□□ -0.38
NID1-202ENST00000366595 LOXL1Q08397 574 aaPredicted RBP12.69□□□□□ -0.38
NID1-202ENST00000366595 SIRPDQ9H106 197 aa12.69□□□□□ -0.38
NID1-202ENST00000366595 CEMP1Q6PRD7 247 aaPredicted RBP12.69□□□□□ -0.38
NID1-202ENST00000366595 TP73-AS1Q9UF72 201 aa12.69□□□□□ -0.38
NID1-202ENST00000366595 LINC00269Q8N2A0 174 aa12.68□□□□□ -0.38
NID1-202ENST00000366595 IGKV2-24A0A0C4DH68 120 aa12.68□□□□□ -0.38
NID1-202ENST00000366595 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
NID1-202ENST00000366595 SIPA1L1O43166 1804 aa12.68□□□□□ -0.38
NID1-202ENST00000366595 MAP6D1Q9H9H5 199 aa12.68□□□□□ -0.38
NID1-202ENST00000366595 IGHV4-30-2A0A087WSY4 118 aa12.67□□□□□ -0.38
NID1-202ENST00000366595 FRMD6-AS1P0C7T7 363 aa12.67□□□□□ -0.38
NID1-202ENST00000366595 WFDC11Q8NEX6 87 aa12.67□□□□□ -0.38
NID1-202ENST00000366595 C11orf1Q9H5F2 150 aa12.67□□□□□ -0.38
NID1-202ENST00000366595 DHRS4-AS1Q9P1J3 65 aa12.67□□□□□ -0.38
NID1-202ENST00000366595 MRPS12O15235 138 aaKnown RBP12.66□□□□□ -0.38
NID1-202ENST00000366595 IGFL2Q6UWQ7 119 aa12.66□□□□□ -0.38
NID1-202ENST00000366595 IGLV4-3A0A075B6K6 122 aa12.66□□□□□ -0.38
NID1-202ENST00000366595 PLA2G2CQ5R387 149 aa12.66□□□□□ -0.38
NID1-202ENST00000366595 TRBV27A0A0K0K1C4 114 aa12.65□□□□□ -0.38
NID1-202ENST00000366595 ZNF706Q9Y5V0 76 aaPredicted RBP12.65□□□□□ -0.38
NID1-202ENST00000366595 ODF3L1Q8IXM7 274 aa12.65□□□□□ -0.38
NID1-202ENST00000366595 IGLV2-8P01709 118 aa12.65□□□□□ -0.38
NID1-202ENST00000366595 SLPIP03973 132 aa12.64□□□□□ -0.39
NID1-202ENST00000366595 SPRNQ5BIV9 151 aa12.64□□□□□ -0.39
NID1-202ENST00000366595 LINC00467Q9BRT7 94 aa12.64□□□□□ -0.39
NID1-202ENST00000366595 DOCK8Q8NF50 2099 aa12.64□□□□□ -0.39
NID1-202ENST00000366595 MALRD1Q5VYJ5 2156 aa12.64□□□□□ -0.39
NID1-202ENST00000366595 Q6Q795 121 aa12.64□□□□□ -0.39
NID1-202ENST00000366595 COL6A6A6NMZ7 2263 aa12.64□□□□□ -0.39
NID1-202ENST00000366595 A0A087WZ39 114 aa12.63□□□□□ -0.39
NID1-202ENST00000366595 PYGO1Q9Y3Y4 419 aa12.63□□□□□ -0.39
NID1-202ENST00000366595 C6orf99Q4VX62 202 aa12.63□□□□□ -0.39
NID1-202ENST00000366595 Q6JHZ5 121 aa12.63□□□□□ -0.39
NID1-202ENST00000366595 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
NID1-202ENST00000366595 RBX1P62877 108 aa12.63□□□□□ -0.39
NID1-202ENST00000366595 ZNF407Q9C0G0 2248 aa12.63□□□□□ -0.39
NID1-202ENST00000366595 ZNF80P51504 273 aaPredicted RBP12.63□□□□□ -0.39
NID1-202ENST00000366595 DAZAP2Q15038 168 aaPredicted RBP12.63□□□□□ -0.39
NID1-202ENST00000366595 C11orf45Q8TAV5 145 aa12.63□□□□□ -0.39
NID1-202ENST00000366595 IGKV1D-37A0A075B6S9 117 aa12.62□□□□□ -0.39
NID1-202ENST00000366595 LST1O00453 97 aa12.62□□□□□ -0.39
NID1-202ENST00000366595 Q8N7P7 452 aa12.62□□□□□ -0.39
NID1-202ENST00000366595 MUC7Q8TAX7 377 aa12.62□□□□□ -0.39
NID1-202ENST00000366595 TRPM7Q96QT4 1865 aa12.62□□□□□ -0.39
NID1-202ENST00000366595 SNURFQ9Y675 71 aa12.62□□□□□ -0.39
NID1-202ENST00000366595 A6NDX4 124 aa12.62□□□□□ -0.39
NID1-202ENST00000366595 UNQ9165/PRO28630Q6UXU0 137 aa12.62□□□□□ -0.39
NID1-202ENST00000366595 IGLV2-14P01704 120 aa12.61□□□□□ -0.39
NID1-202ENST00000366595 MBD6Q96DN6 1003 aa12.61□□□□□ -0.39
NID1-202ENST00000366595 A0A096LNI7 61 aa12.61□□□□□ -0.39
NID1-202ENST00000366595 DEFB4AO15263 64 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms