RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 XCL2Q9UBD3 114 aa12.16□□□□□ -0.46
CLSTN1-201ENST00000361311 COL5A1P20908 1838 aaPredicted RBP12.16□□□□□ -0.46
CLSTN1-201ENST00000361311 EXPH5Q8NEV8 1989 aa12.16□□□□□ -0.46
CLSTN1-201ENST00000361311 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
CLSTN1-201ENST00000361311 A0A1B0GX51 115 aa12.16□□□□□ -0.46
CLSTN1-201ENST00000361311 HOXD3P31249 432 aaPredicted RBP12.16□□□□□ -0.46
CLSTN1-201ENST00000361311 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
CLSTN1-201ENST00000361311 UTRNP46939 3433 aa12.15□□□□□ -0.46
CLSTN1-201ENST00000361311 CHD8Q9HCK8 2581 aa12.15□□□□□ -0.46
CLSTN1-201ENST00000361311 LINC00643Q86TS7 51 aa12.15□□□□□ -0.47
CLSTN1-201ENST00000361311 IGHV1-58A0A0C4DH39 117 aa12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 IGF1P05019 195 aa12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 ZMAT4Q9H898 229 aa12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 CNFNQ9BYD5 112 aa12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 C11orf21Q9P2W6 132 aa12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 FSTL3O95633 263 aa12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 GRNP28799 593 aaKnown RBP12.14□□□□□ -0.47
CLSTN1-201ENST00000361311 P0DMU3 169 aa12.13□□□□□ -0.47
CLSTN1-201ENST00000361311 FAM231AP0DMU4 169 aa12.13□□□□□ -0.47
CLSTN1-201ENST00000361311 FAM231CP0DMU5 169 aa12.13□□□□□ -0.47
CLSTN1-201ENST00000361311 C11orf44Q8N8P7 122 aa12.13□□□□□ -0.47
CLSTN1-201ENST00000361311 TRIAP1O43715 76 aa12.13□□□□□ -0.47
CLSTN1-201ENST00000361311 TLN1Q9Y490 2541 aaKnown RBP12.13□□□□□ -0.47
CLSTN1-201ENST00000361311 HAMPP81172 84 aa12.12□□□□□ -0.47
CLSTN1-201ENST00000361311 MRPS12O15235 138 aaKnown RBP12.12□□□□□ -0.47
CLSTN1-201ENST00000361311 CCDC140Q96MF4 163 aa12.12□□□□□ -0.47
CLSTN1-201ENST00000361311 TMEM243Q9BU79 118 aa12.12□□□□□ -0.47
CLSTN1-201ENST00000361311 H3BUA1 57 aa12.12□□□□□ -0.47
CLSTN1-201ENST00000361311 UNQ9165/PRO28630Q6UXU0 137 aa12.12□□□□□ -0.47
CLSTN1-201ENST00000361311 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
CLSTN1-201ENST00000361311 B4DSR2 109 aa12.12□□□□□ -0.47
CLSTN1-201ENST00000361311 MIAQ16674 131 aa12.11□□□□□ -0.47
CLSTN1-201ENST00000361311 Q6ZS46 218 aa12.11□□□□□ -0.47
CLSTN1-201ENST00000361311 MDFICQ9P1T7 246 aa12.11□□□□□ -0.47
CLSTN1-201ENST00000361311 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
CLSTN1-201ENST00000361311 RBMY1FQ15415 496 aaKnown RBP12.1□□□□□ -0.47
CLSTN1-201ENST00000361311 CEP192Q8TEP8 1941 aa12.1□□□□□ -0.47
CLSTN1-201ENST00000361311 NXPH4O95158 308 aa12.1□□□□□ -0.47
CLSTN1-201ENST00000361311 NFE4Q86UQ8 179 aa12.1□□□□□ -0.47
CLSTN1-201ENST00000361311 TRBV30A0A0K0K1B3 111 aa12.1□□□□□ -0.47
CLSTN1-201ENST00000361311 RPL32P62910 135 aaKnown RBP12.1□□□□□ -0.47
CLSTN1-201ENST00000361311 CEMP1Q6PRD7 247 aaPredicted RBP12.1□□□□□ -0.47
CLSTN1-201ENST00000361311 SPTBN4Q9H254 2564 aa12.1□□□□□ -0.47
CLSTN1-201ENST00000361311 UBE2D1P51668 147 aa12.09□□□□□ -0.47
CLSTN1-201ENST00000361311 C5orf56Q8N8D9 126 aa12.09□□□□□ -0.47
CLSTN1-201ENST00000361311 ZFAND3Q9H8U3 227 aa12.09□□□□□ -0.47
CLSTN1-201ENST00000361311 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
CLSTN1-201ENST00000361311 UQCRQO14949 82 aa12.09□□□□□ -0.47
CLSTN1-201ENST00000361311 ATP5G1P05496 136 aa12.08□□□□□ -0.48
CLSTN1-201ENST00000361311 ZFAND2AQ8N6M9 145 aa12.08□□□□□ -0.48
CLSTN1-201ENST00000361311 SND1-IT1Q9HBX3 110 aa12.08□□□□□ -0.48
CLSTN1-201ENST00000361311 SS18Q15532 418 aa12.08□□□□□ -0.48
CLSTN1-201ENST00000361311 VSIG2Q96IQ7 327 aa12.08□□□□□ -0.48
CLSTN1-201ENST00000361311 CFHR3Q02985 330 aa12.07□□□□□ -0.48
CLSTN1-201ENST00000361311 TRBV12-3P01733 135 aa12.07□□□□□ -0.48
CLSTN1-201ENST00000361311 ORMDL1Q9P0S3 153 aa12.07□□□□□ -0.48
CLSTN1-201ENST00000361311 H0YGX0 51 aa12.06□□□□□ -0.48
CLSTN1-201ENST00000361311 LINC01548A6NM66 108 aa12.06□□□□□ -0.48
CLSTN1-201ENST00000361311 LY6LH3BQJ8 138 aa12.06□□□□□ -0.48
CLSTN1-201ENST00000361311 BLCAPP62952 87 aa12.06□□□□□ -0.48
CLSTN1-201ENST00000361311 CRLF1O75462 422 aa12.06□□□□□ -0.48
CLSTN1-201ENST00000361311 MSMBP08118 114 aa12.06□□□□□ -0.48
CLSTN1-201ENST00000361311 U3KQE9 123 aa12.06□□□□□ -0.48
CLSTN1-201ENST00000361311 HTN3P15516 51 aa12.06□□□□□ -0.48
CLSTN1-201ENST00000361311 C20orf173Q96LM9 149 aa12.06□□□□□ -0.48
CLSTN1-201ENST00000361311 ZFP36P26651 326 aaKnown RBP12.05□□□□□ -0.48
CLSTN1-201ENST00000361311 UBE2D3P61077 147 aa12.05□□□□□ -0.48
CLSTN1-201ENST00000361311 UBE2D2P62837 147 aa12.05□□□□□ -0.48
CLSTN1-201ENST00000361311 SVIPQ8NHG7 77 aa12.05□□□□□ -0.48
CLSTN1-201ENST00000361311 ODF3BA8MYP8 253 aa12.05□□□□□ -0.48
CLSTN1-201ENST00000361311 RPL35AP18077 110 aaKnown RBP12.05□□□□□ -0.48
CLSTN1-201ENST00000361311 IGHV4-4A0A075B6R2 117 aa12.04□□□□□ -0.48
CLSTN1-201ENST00000361311 COX7A2LO14548 114 aa12.04□□□□□ -0.48
CLSTN1-201ENST00000361311 IGLV4-3A0A075B6K6 122 aa12.04□□□□□ -0.48
CLSTN1-201ENST00000361311 Q9HAA7 133 aa12.04□□□□□ -0.48
CLSTN1-201ENST00000361311 J3QKU1 62 aa12.04□□□□□ -0.48
CLSTN1-201ENST00000361311 DAZ2Q13117 558 aaKnown RBP12.04□□□□□ -0.48
CLSTN1-201ENST00000361311 DAZ4Q86SG3 579 aaKnown RBP12.04□□□□□ -0.48
CLSTN1-201ENST00000361311 DAZ3Q9NR90 486 aaKnown RBP12.04□□□□□ -0.48
CLSTN1-201ENST00000361311 MYO9AB2RTY4 2548 aa12.03□□□□□ -0.48
CLSTN1-201ENST00000361311 CDIP1Q9H305 208 aa12.03□□□□□ -0.48
CLSTN1-201ENST00000361311 C3orf22Q8N5N4 141 aa12.03□□□□□ -0.48
CLSTN1-201ENST00000361311 PRR9Q5T870 116 aa12.03□□□□□ -0.48
CLSTN1-201ENST00000361311 NAV2Q8IVL1 2488 aa12.03□□□□□ -0.48
CLSTN1-201ENST00000361311 NSUN5P1Q3KNT7 163 aa12.02□□□□□ -0.48
CLSTN1-201ENST00000361311 PRRC2CQ9Y520 2896 aaKnown RBP12.02□□□□□ -0.49
CLSTN1-201ENST00000361311 LECT2O14960 151 aa12.02□□□□□ -0.49
CLSTN1-201ENST00000361311 DEFB130BP0DP73 79 aa12.02□□□□□ -0.49
CLSTN1-201ENST00000361311 DEFB130AP0DP74 79 aa12.02□□□□□ -0.49
CLSTN1-201ENST00000361311 Q6ZQT7 251 aa12.02□□□□□ -0.49
CLSTN1-201ENST00000361311 TRBV27A0A0K0K1C4 114 aa12.02□□□□□ -0.49
CLSTN1-201ENST00000361311 Q6Q795 121 aa12.01□□□□□ -0.49
CLSTN1-201ENST00000361311 PF4P02776 101 aa12.01□□□□□ -0.49
CLSTN1-201ENST00000361311 CRIP2P52943 208 aaPredicted RBP12.01□□□□□ -0.49
CLSTN1-201ENST00000361311 RBM3P98179 157 aaKnown RBP12.01□□□□□ -0.49
CLSTN1-201ENST00000361311 TMEM263Q8WUH6 116 aaKnown RBP12.01□□□□□ -0.49
CLSTN1-201ENST00000361311 POLR2KP53803 58 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms