RNA–Protein interactions for RNA: ENST00000358923.10

PDE4D-204, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-204ENST00000358923 MORN3Q6PF18 240 aaPredicted RBP13.45□□□□□ -0.26
PDE4D-204ENST00000358923 Q6ZSV7 163 aa13.45□□□□□ -0.26
PDE4D-204ENST00000358923 ARL17AQ8IVW1 177 aa13.45□□□□□ -0.26
PDE4D-204ENST00000358923 AMN1Q8IY45 258 aa13.45□□□□□ -0.26
PDE4D-204ENST00000358923 MAPKAPK5-AS1Q8N8E1 139 aa13.45□□□□□ -0.26
PDE4D-204ENST00000358923 TMEM213A2RRL7 107 aa13.45□□□□□ -0.26
PDE4D-204ENST00000358923 H3BUA1 57 aa13.45□□□□□ -0.26
PDE4D-204ENST00000358923 SNCGO76070 127 aa13.45□□□□□ -0.26
PDE4D-204ENST00000358923 HOXD3P31249 432 aaPredicted RBP13.45□□□□□ -0.26
PDE4D-204ENST00000358923 SFTA2Q6UW10 78 aa13.45□□□□□ -0.26
PDE4D-204ENST00000358923 TMEM158Q8WZ71 300 aa13.44□□□□□ -0.26
PDE4D-204ENST00000358923 MSRB1Q9NZV6 116 aa13.44□□□□□ -0.26
PDE4D-204ENST00000358923 DPM2O94777 84 aa13.44□□□□□ -0.26
PDE4D-204ENST00000358923 HLA-DRB4P13762 266 aa13.44□□□□□ -0.26
PDE4D-204ENST00000358923 HLA-DRB4X5D2U9 266 aa13.44□□□□□ -0.26
PDE4D-204ENST00000358923 FOXC2Q99958 501 aa13.43□□□□□ -0.26
PDE4D-204ENST00000358923 U3KQK5 164 aa13.43□□□□□ -0.26
PDE4D-204ENST00000358923 TWIST1Q15672 202 aa13.43□□□□□ -0.26
PDE4D-204ENST00000358923 FAM104BQ5XKR9 115 aa13.43□□□□□ -0.26
PDE4D-204ENST00000358923 LYZL1Q6UWQ5 148 aa13.43□□□□□ -0.26
PDE4D-204ENST00000358923 FAM159AQ6UWV7 190 aa13.43□□□□□ -0.26
PDE4D-204ENST00000358923 ZNF493Q6ZR52 646 aa13.43□□□□□ -0.26
PDE4D-204ENST00000358923 TMEM160Q9NX00 188 aa13.43□□□□□ -0.26
PDE4D-204ENST00000358923 M0QXV9 152 aa13.42□□□□□ -0.26
PDE4D-204ENST00000358923 PPDPFQ9H3Y8 114 aa13.42□□□□□ -0.26
PDE4D-204ENST00000358923 CKS2P33552 79 aa13.41□□□□□ -0.26
PDE4D-204ENST00000358923 SMKR1H3BMG3 65 aa13.41□□□□□ -0.26
PDE4D-204ENST00000358923 H3BVH4 76 aa13.41□□□□□ -0.26
PDE4D-204ENST00000358923 NPYP01303 97 aa13.41□□□□□ -0.26
PDE4D-204ENST00000358923 MRPL51Q4U2R6 128 aaKnown RBP13.41□□□□□ -0.26
PDE4D-204ENST00000358923 TRBV7-3A0A075B6L6 115 aa13.41□□□□□ -0.26
PDE4D-204ENST00000358923 A8MWV9 139 aa13.41□□□□□ -0.26
PDE4D-204ENST00000358923 SOCS3O14543 225 aa13.4□□□□□ -0.26
PDE4D-204ENST00000358923 LEPP41159 167 aa13.4□□□□□ -0.26
PDE4D-204ENST00000358923 TMEM78Q5T7P6 136 aa13.4□□□□□ -0.26
PDE4D-204ENST00000358923 SLC50A1Q9BRV3 221 aa13.4□□□□□ -0.26
PDE4D-204ENST00000358923 TRAV4A0A0B4J268 109 aa13.4□□□□□ -0.26
PDE4D-204ENST00000358923 MEIG1Q5JSS6 88 aa13.4□□□□□ -0.26
PDE4D-204ENST00000358923 ZFP2Q6ZN57 461 aa13.4□□□□□ -0.26
PDE4D-204ENST00000358923 SPANXA1Q9NS26 97 aa13.4□□□□□ -0.26
PDE4D-204ENST00000358923 NBEAL2Q6ZNJ1 2754 aa13.39□□□□□ -0.27
PDE4D-204ENST00000358923 LINC01549A6NIU2 74 aa13.39□□□□□ -0.27
PDE4D-204ENST00000358923 LGALS1P09382 135 aaKnown RBP13.39□□□□□ -0.27
PDE4D-204ENST00000358923 KLHL30-AS1Q8NEE0 82 aa13.39□□□□□ -0.27
PDE4D-204ENST00000358923 IGKV3D-20A0A0C4DH25 116 aa13.38□□□□□ -0.27
PDE4D-204ENST00000358923 LYRM7Q5U5X0 104 aa13.38□□□□□ -0.27
PDE4D-204ENST00000358923 ANKRD29Q8N6D5 301 aa13.38□□□□□ -0.27
PDE4D-204ENST00000358923 ATP5LO75964 103 aa13.37□□□□□ -0.27
PDE4D-204ENST00000358923 GAS8-AS1O95177 125 aa13.37□□□□□ -0.27
PDE4D-204ENST00000358923 CD28P10747 220 aa13.37□□□□□ -0.27
PDE4D-204ENST00000358923 LY6G6DO95868 133 aa13.37□□□□□ -0.27
PDE4D-204ENST00000358923 ELANEP08246 267 aa13.37□□□□□ -0.27
PDE4D-204ENST00000358923 UBE2E2Q96LR5 201 aa13.37□□□□□ -0.27
PDE4D-204ENST00000358923 TRBV6-1A0A0K0K1D8 114 aa13.36□□□□□ -0.27
PDE4D-204ENST00000358923 SPXQ9BT56 116 aa13.36□□□□□ -0.27
PDE4D-204ENST00000358923 MYMXA0A1B0GTQ4 84 aa13.36□□□□□ -0.27
PDE4D-204ENST00000358923 RNASE4P34096 147 aaKnown RBP13.36□□□□□ -0.27
PDE4D-204ENST00000358923 DCANP1Q8TF63 244 aa13.36□□□□□ -0.27
PDE4D-204ENST00000358923 CRLF1O75462 422 aa13.35□□□□□ -0.27
PDE4D-204ENST00000358923 MRPL35Q9NZE8 188 aaKnown RBP13.35□□□□□ -0.27
PDE4D-204ENST00000358923 ZNF580Q9UK33 172 aa13.35□□□□□ -0.27
PDE4D-204ENST00000358923 TRAV12-2A0A075B6T6 113 aa13.35□□□□□ -0.27
PDE4D-204ENST00000358923 ASIPP42127 132 aa13.35□□□□□ -0.27
PDE4D-204ENST00000358923 MYOZ3Q8TDC0 251 aa13.35□□□□□ -0.27
PDE4D-204ENST00000358923 INAFM1C9JVW0 142 aa13.33□□□□□ -0.28
PDE4D-204ENST00000358923 CITED2Q99967 270 aaPredicted RBP13.33□□□□□ -0.28
PDE4D-204ENST00000358923 BAHCC1Q9P281 2608 aa13.33□□□□□ -0.28
PDE4D-204ENST00000358923 PRM2P04554 102 aa13.33□□□□□ -0.28
PDE4D-204ENST00000358923 C5orf47Q569G3 176 aa13.33□□□□□ -0.28
PDE4D-204ENST00000358923 TCL1BO95988 128 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 UBE2D3P61077 147 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 UBE2D2P62837 147 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 Q6Q795 121 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 Q8N2B8 174 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 OR10J6PQ8NGY7 276 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 LINC01619G3V211 115 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 C9orf47Q6ZRZ4 202 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 ZFAND2AQ8N6M9 145 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 TMEM126AQ9H061 195 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 LINC01006Q8NI28 216 aa13.32□□□□□ -0.28
PDE4D-204ENST00000358923 GNRH2O43555 120 aa13.31□□□□□ -0.28
PDE4D-204ENST00000358923 SCGB1C2P0DMR2 95 aa13.31□□□□□ -0.28
PDE4D-204ENST00000358923 SBSPONQ8IVN8 264 aa13.31□□□□□ -0.28
PDE4D-204ENST00000358923 C3orf56Q8N813 242 aa13.31□□□□□ -0.28
PDE4D-204ENST00000358923 CSDC2Q9Y534 153 aaKnown RBP13.31□□□□□ -0.28
PDE4D-204ENST00000358923 GATA1P15976 413 aaPredicted RBP13.3□□□□□ -0.28
PDE4D-204ENST00000358923 KNCNA6PVL3 124 aa13.29□□□□□ -0.28
PDE4D-204ENST00000358923 K7EMT4 169 aa13.29□□□□□ -0.28
PDE4D-204ENST00000358923 NXT2Q9NPJ8 142 aaKnown RBP13.29□□□□□ -0.28
PDE4D-204ENST00000358923 DEFB104AQ8WTQ1 72 aa13.29□□□□□ -0.28
PDE4D-204ENST00000358923 RBAKDNA6NC62 111 aa13.29□□□□□ -0.28
PDE4D-204ENST00000358923 TMEM61Q8N0U2 210 aa13.29□□□□□ -0.28
PDE4D-204ENST00000358923 TRAV12-3A0A0B4J271 114 aa13.28□□□□□ -0.28
PDE4D-204ENST00000358923 HTN1P15515 57 aa13.28□□□□□ -0.28
PDE4D-204ENST00000358923 RASL10AQ92737 203 aa13.28□□□□□ -0.28
PDE4D-204ENST00000358923 TRAV26-2A0A0B4J265 109 aa13.28□□□□□ -0.28
PDE4D-204ENST00000358923 SRSF9Q13242 221 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDE4D-204ENST00000358923 RNF152Q8N8N0 203 aa13.28□□□□□ -0.28
PDE4D-204ENST00000358923 IGLC6P0CF74 106 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms