RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 IGHV4-38-2P0DP08 117 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 TEX49A0A1B0GTD5 131 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 IGHV3-33P01772 117 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 SPINK13Q1W4C9 94 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 FBXL19-AS1Q494R0 122 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 C10orf99Q6UWK7 81 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 ERG28Q9UKR5 140 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 POLQO75417 2590 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 PRRC2AP48634 2157 aaKnown RBP7.54□□□□□ -1.2
PTPRA-203ENST00000356147 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 NDUFA4O00483 81 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 PROK1P58294 105 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 LYRM7Q5U5X0 104 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 DUX5Q96PT3 197 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 Q9UF83 564 aa7.54□□□□□ -1.2
PTPRA-203ENST00000356147 B5MCH6 92 aa7.53□□□□□ -1.2
PTPRA-203ENST00000356147 H3BUX3 64 aa7.53□□□□□ -1.2
PTPRA-203ENST00000356147 FAM19A4Q96LR4 140 aa7.53□□□□□ -1.2
PTPRA-203ENST00000356147 FAM223BA6NKX1 122 aa7.53□□□□□ -1.2
PTPRA-203ENST00000356147 KNCNA6PVL3 124 aa7.53□□□□□ -1.2
PTPRA-203ENST00000356147 FAM223AQ8IWN6 122 aa7.53□□□□□ -1.2
PTPRA-203ENST00000356147 Q8N1Y9 231 aa7.53□□□□□ -1.2
PTPRA-203ENST00000356147 TEX29Q8N6K0 151 aa7.53□□□□□ -1.2
PTPRA-203ENST00000356147 IGHV4OR15-8A0A075B7B6 117 aa7.52□□□□□ -1.21
PTPRA-203ENST00000356147 A0A087WW49 117 aa7.52□□□□□ -1.21
PTPRA-203ENST00000356147 IGHV1-69DA0A0B4J2H0 117 aa7.52□□□□□ -1.21
PTPRA-203ENST00000356147 PPP1R17O96001 155 aa7.52□□□□□ -1.21
PTPRA-203ENST00000356147 ZNF22P17026 224 aaPredicted RBP7.52□□□□□ -1.21
PTPRA-203ENST00000356147 PAPPA-AS1Q5QFB9 102 aa7.52□□□□□ -1.21
PTPRA-203ENST00000356147 ZFAND6Q6FIF0 208 aa7.52□□□□□ -1.21
PTPRA-203ENST00000356147 TMEM263Q8WUH6 116 aaKnown RBP7.52□□□□□ -1.21
PTPRA-203ENST00000356147 DAND5Q8N907 189 aa7.52□□□□□ -1.21
PTPRA-203ENST00000356147 TMEM141Q96I45 108 aa7.52□□□□□ -1.21
PTPRA-203ENST00000356147 TIMM17AQ99595 171 aa7.52□□□□□ -1.21
PTPRA-203ENST00000356147 TMEM223A0PJW6 202 aa7.51□□□□□ -1.21
PTPRA-203ENST00000356147 KLLNB2CW77 178 aa7.51□□□□□ -1.21
PTPRA-203ENST00000356147 M0QY20 66 aa7.51□□□□□ -1.21
PTPRA-203ENST00000356147 C19orf54Q5BKX5 351 aa7.51□□□□□ -1.21
PTPRA-203ENST00000356147 VCX2Q9H322 139 aa7.51□□□□□ -1.21
PTPRA-203ENST00000356147 TRBV27A0A0K0K1C4 114 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 A0A0U1RRA0 63 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 RHODO00212 210 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 TRIAP1O43715 76 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 SBSPONQ8IVN8 264 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 DAZ1Q9NQZ3 744 aaKnown RBP7.5□□□□□ -1.21
PTPRA-203ENST00000356147 MYO9AB2RTY4 2548 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 NXPH4O95158 308 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 KLK9Q2XQG4 91 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 ADAMTSL4-AS1Q5T5F5 129 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 CLEC2BQ92478 149 aa7.5□□□□□ -1.21
PTPRA-203ENST00000356147 A0A0J9YXY3 114 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 NHLRC4P0CG21 123 aaPredicted RBP7.49□□□□□ -1.21
PTPRA-203ENST00000356147 MED14OSP0DP75 135 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 ITPR1Q14643 2758 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 IGLV4-3A0A075B6K6 122 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 LEPROTO15243 131 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 IGHV1-69P01742 117 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 TTC32Q5I0X7 151 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 APRG1Q8IVJ8 170 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 DCANP1Q8TF63 244 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 FLNCQ14315 2725 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 SETD2Q9BYW2 2564 aaPredicted RBP7.49□□□□□ -1.21
PTPRA-203ENST00000356147 IGHV4-61A0A0C4DH41 118 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 C19orf84I3L1E1 186 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 SNCGO76070 127 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 IGHV3-30-3P0DP02 117 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 GAGE2BQ13066 116 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 GAGE2EQ4V326 116 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 POM121L12Q8N7R1 296 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 C3orf56Q8N813 242 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 C20orf203Q8NBC4 194 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 GAGE2DQ9UEU5 116 aa7.49□□□□□ -1.21
PTPRA-203ENST00000356147 USP9XQ93008 2570 aaPredicted RBP7.48□□□□□ -1.21
PTPRA-203ENST00000356147 CCDC179H3BU77 68 aa7.48□□□□□ -1.21
PTPRA-203ENST00000356147 LGALS9O00182 355 aa7.48□□□□□ -1.21
PTPRA-203ENST00000356147 CD28P10747 220 aa7.48□□□□□ -1.21
PTPRA-203ENST00000356147 HIST2H2BDQ6DRA6 164 aa7.48□□□□□ -1.21
PTPRA-203ENST00000356147 IGHV3-38A0A0C4DH36 116 aa7.48□□□□□ -1.21
PTPRA-203ENST00000356147 LY6DQ14210 128 aa7.47□□□□□ -1.21
PTPRA-203ENST00000356147 DUX3Q96PT4 197 aa7.47□□□□□ -1.21
PTPRA-203ENST00000356147 CITED1Q99966 193 aa7.47□□□□□ -1.21
PTPRA-203ENST00000356147 TIMM21Q9BVV7 248 aa7.47□□□□□ -1.21
PTPRA-203ENST00000356147 TLN2Q9Y4G6 2542 aa7.47□□□□□ -1.21
PTPRA-203ENST00000356147 WNK1Q9H4A3 2382 aa7.47□□□□□ -1.21
PTPRA-203ENST00000356147 TMEM262E9PQX1 116 aa7.47□□□□□ -1.21
PTPRA-203ENST00000356147 ID1P41134 155 aa7.47□□□□□ -1.21
PTPRA-203ENST00000356147 C15orf53Q8NAA6 179 aa7.47□□□□□ -1.21
PTPRA-203ENST00000356147 ZNF625Q96I27 306 aaPredicted RBP7.47□□□□□ -1.21
PTPRA-203ENST00000356147 PIEZO1Q92508 2521 aa7.46□□□□□ -1.21
PTPRA-203ENST00000356147 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.46□□□□□ -1.21
PTPRA-203ENST00000356147 IGKV2-29A2NJV5 120 aaPredicted RBP7.46□□□□□ -1.21
PTPRA-203ENST00000356147 IGHG2P01859 326 aa7.46□□□□□ -1.21
PTPRA-203ENST00000356147 ATXN8Q156A1 80 aa7.46□□□□□ -1.21
PTPRA-203ENST00000356147 C2orf82Q6UX34 121 aa7.46□□□□□ -1.21
PTPRA-203ENST00000356147 I3L3M4 83 aa7.46□□□□□ -1.22
PTPRA-203ENST00000356147 USMG5Q96IX5 58 aa7.46□□□□□ -1.22
PTPRA-203ENST00000356147 C9orf85Q96MD7 179 aa7.46□□□□□ -1.22
PTPRA-203ENST00000356147 IGHV1OR15-1A0A075B7D0 117 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms