RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 PRRC2CQ9Y520 2896 aaKnown RBP7.34□□□□□ -1.23
GABPA-201ENST00000354828 H3BUT2 72 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 IGLC2P0DOY2 106 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 GATA1P15976 413 aaPredicted RBP7.34□□□□□ -1.23
GABPA-201ENST00000354828 GAGE2BQ13066 116 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 HIST1H2BLQ99880 126 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 MSRB1Q9NZV6 116 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 BRWD1-AS2P59051 145 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 POLR3KQ9Y2Y1 108 aaPredicted RBP7.33□□□□□ -1.24
GABPA-201ENST00000354828 SPCS1Q9Y6A9 102 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 TRAV4A0A0B4J268 109 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 K7EN84 100 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 Q6ZPA2 131 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 Q8N6K4 173 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 STPG4Q8N801 248 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 IGKV1D-37A0A075B6S9 117 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 TRAV10A0A0B4J240 114 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 K7ERU9 68 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 HSD52Q0P140 79 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 TAL2Q16559 108 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 C10orf126Q8N4M7 172 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 WFDC10AQ9H1F0 79 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 SPANXA1Q9NS26 97 aa7.33□□□□□ -1.24
GABPA-201ENST00000354828 CRIP3Q6Q6R5 217 aa7.32□□□□□ -1.24
GABPA-201ENST00000354828 PLXNB1O43157 2135 aa7.32□□□□□ -1.24
GABPA-201ENST00000354828 SCRT2Q9NQ03 307 aa7.31□□□□□ -1.24
GABPA-201ENST00000354828 FGF6P10767 208 aa7.31□□□□□ -1.24
GABPA-201ENST00000354828 ADCYAP1P18509 176 aa7.31□□□□□ -1.24
GABPA-201ENST00000354828 IGLV2-18A0A075B6J9 118 aa7.31□□□□□ -1.24
GABPA-201ENST00000354828 HIST3H2BBQ8N257 126 aa7.31□□□□□ -1.24
GABPA-201ENST00000354828 ZNF479Q96JC4 524 aa7.31□□□□□ -1.24
GABPA-201ENST00000354828 IGHV4-28A0A0C4DH34 117 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 M0R2N4 97 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 MRPL35Q9NZE8 188 aaKnown RBP7.3□□□□□ -1.24
GABPA-201ENST00000354828 TRANK1O15050 2925 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 IGLV1-40P01703 118 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 IGHV4-30-4P0DP06 118 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 SLC25A29Q8N8R3 303 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 CRYGDP07320 174 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 P0C879 139 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 Q0VG73 95 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 C14orf177Q52M58 125 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 BOD1L2Q8IYS8 172 aa7.3□□□□□ -1.24
GABPA-201ENST00000354828 NDUFA1O15239 70 aa7.29□□□□□ -1.24
GABPA-201ENST00000354828 TP53TG3Q9ULZ0 132 aa7.29□□□□□ -1.24
GABPA-201ENST00000354828 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
GABPA-201ENST00000354828 ACANP16112 2415 aa7.29□□□□□ -1.24
GABPA-201ENST00000354828 F8VRH5 84 aa7.29□□□□□ -1.24
GABPA-201ENST00000354828 OVOL2Q9BRP0 275 aa7.29□□□□□ -1.24
GABPA-201ENST00000354828 ZFAND3Q9H8U3 227 aa7.29□□□□□ -1.24
GABPA-201ENST00000354828 TRBV10-1A0A0K0K1A3 114 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 ETDCA0A1B0GVM5 59 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 MED14OSP0DP75 135 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 ODF3Q96PU9 254 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 Q9H8V8 135 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 K7EMI3 77 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 ZFP2Q6ZN57 461 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 C20orf173Q96LM9 149 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 KIR2DL5BA0A0G2JN68 375 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 KIR2DL5BA0A0G2JPC4 375 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 KIR2DL5AQ8N109 375 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 KIR2DL5BQ8NHK3 375 aa7.28□□□□□ -1.24
GABPA-201ENST00000354828 TRAV8-3A0A0A6YYJ7 113 aa7.27□□□□□ -1.24
GABPA-201ENST00000354828 IGKV2-24A0A0C4DH68 120 aa7.27□□□□□ -1.24
GABPA-201ENST00000354828 COX11Q9Y6N1 276 aa7.27□□□□□ -1.24
GABPA-201ENST00000354828 J3QQQ9 107 aa7.27□□□□□ -1.25
GABPA-201ENST00000354828 TRAV8-2A0A0B4J237 113 aa7.27□□□□□ -1.25
GABPA-201ENST00000354828 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
GABPA-201ENST00000354828 LINC00518Q8N0U6 118 aa7.27□□□□□ -1.25
GABPA-201ENST00000354828 F8P00451 2351 aa7.27□□□□□ -1.25
GABPA-201ENST00000354828 A0A0J9YWU9 116 aa7.26□□□□□ -1.25
GABPA-201ENST00000354828 GDF5OSQ5U4N7 250 aa7.26□□□□□ -1.25
GABPA-201ENST00000354828 C16orf95Q9H693 158 aa7.26□□□□□ -1.25
GABPA-201ENST00000354828 UBE2AP49459 152 aa7.26□□□□□ -1.25
GABPA-201ENST00000354828 EIF4EBP1Q13541 118 aaPredicted RBP7.26□□□□□ -1.25
GABPA-201ENST00000354828 CCL25O15444 150 aa7.26□□□□□ -1.25
GABPA-201ENST00000354828 PLA2G2EQ9NZK7 142 aa7.26□□□□□ -1.25
GABPA-201ENST00000354828 HECTD1Q9ULT8 2610 aa7.26□□□□□ -1.25
GABPA-201ENST00000354828 RPL32P62910 135 aaKnown RBP7.26□□□□□ -1.25
GABPA-201ENST00000354828 GTSF1LQ9H1H1 148 aa7.26□□□□□ -1.25
GABPA-201ENST00000354828 PRUNE2Q8WUY3 3088 aa7.26□□□□□ -1.25
GABPA-201ENST00000354828 GAGE12HA6NDE8 117 aa7.25□□□□□ -1.25
GABPA-201ENST00000354828 NAA38Q9BRA0 125 aaKnown RBP7.25□□□□□ -1.25
GABPA-201ENST00000354828 A0A0J9YXV3 536 aa7.25□□□□□ -1.25
GABPA-201ENST00000354828 FRMD6-AS1P0C7T7 363 aa7.25□□□□□ -1.25
GABPA-201ENST00000354828 NANOS2P60321 138 aaKnown RBP7.25□□□□□ -1.25
GABPA-201ENST00000354828 TNRC6BQ9UPQ9 1833 aaKnown RBP7.25□□□□□ -1.25
GABPA-201ENST00000354828 LGALS9BQ3B8N2 356 aa7.25□□□□□ -1.25
GABPA-201ENST00000354828 SAMD5Q5TGI4 173 aa7.25□□□□□ -1.25
GABPA-201ENST00000354828 RPL39P62891 51 aaKnown RBP7.25□□□□□ -1.25
GABPA-201ENST00000354828 HIGD2BQ4VC39 106 aa7.25□□□□□ -1.25
GABPA-201ENST00000354828 DEFB105AQ8NG35 78 aa7.25□□□□□ -1.25
GABPA-201ENST00000354828 PTPRBP23467 1997 aa7.25□□□□□ -1.25
GABPA-201ENST00000354828 IGHV4-4A0A075B6R2 117 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 ZNF747Q9BV97 191 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 SIVA1O15304 175 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 P0DMU3 169 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 FAM231AP0DMU4 169 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 FAM231CP0DMU5 169 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms