RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 HIGD2AQ9BW72 106 aa17.52■□□□□ 0.39
NPAS3-201ENST00000346562 PLA2G5P39877 138 aa17.52■□□□□ 0.39
NPAS3-201ENST00000346562 SHISA2Q6UWI4 295 aa17.52■□□□□ 0.39
NPAS3-201ENST00000346562 MIAQ16674 131 aa17.51■□□□□ 0.39
NPAS3-201ENST00000346562 WFDC11Q8NEX6 87 aa17.51■□□□□ 0.39
NPAS3-201ENST00000346562 DEFB131BA0A096LNP1 70 aa17.51■□□□□ 0.39
NPAS3-201ENST00000346562 IGLV2-14P01704 120 aa17.51■□□□□ 0.39
NPAS3-201ENST00000346562 FAM222AQ5U5X8 452 aa17.51■□□□□ 0.39
NPAS3-201ENST00000346562 Q6ZTI0 123 aa17.5■□□□□ 0.39
NPAS3-201ENST00000346562 FAM19A1Q7Z5A9 133 aa17.5■□□□□ 0.39
NPAS3-201ENST00000346562 USF3Q68DE3 2245 aa17.5■□□□□ 0.39
NPAS3-201ENST00000346562 ODF1Q14990 250 aa17.49■□□□□ 0.39
NPAS3-201ENST00000346562 CASC2Q6XLA1 102 aa17.49■□□□□ 0.39
NPAS3-201ENST00000346562 ABCA4P78363 2273 aa17.49■□□□□ 0.39
NPAS3-201ENST00000346562 LMO4P61968 165 aa17.48■□□□□ 0.39
NPAS3-201ENST00000346562 ACACAQ13085 2346 aa17.48■□□□□ 0.39
NPAS3-201ENST00000346562 NUPR1O60356 82 aa17.48■□□□□ 0.39
NPAS3-201ENST00000346562 CHCHD10Q8WYQ3 142 aaPredicted RBP17.48■□□□□ 0.39
NPAS3-201ENST00000346562 SS18L2Q9UHA2 77 aa17.48■□□□□ 0.39
NPAS3-201ENST00000346562 FAM110AQ9BQ89 295 aa17.48■□□□□ 0.39
NPAS3-201ENST00000346562 CRYGBP07316 175 aa17.48■□□□□ 0.39
NPAS3-201ENST00000346562 A0A087WZ39 114 aa17.47■□□□□ 0.39
NPAS3-201ENST00000346562 C19orf71A6NCJ1 209 aa17.47■□□□□ 0.39
NPAS3-201ENST00000346562 LRCOL1A6NCL2 159 aa17.47■□□□□ 0.39
NPAS3-201ENST00000346562 UPK3BQ9BT76 320 aa17.47■□□□□ 0.39
NPAS3-201ENST00000346562 IGF1P05019 195 aa17.47■□□□□ 0.39
NPAS3-201ENST00000346562 CEMP1Q6PRD7 247 aaPredicted RBP17.46■□□□□ 0.39
NPAS3-201ENST00000346562 TP53TG3Q9ULZ0 132 aa17.46■□□□□ 0.39
NPAS3-201ENST00000346562 INAFM1C9JVW0 142 aa17.46■□□□□ 0.39
NPAS3-201ENST00000346562 BPY2O14599 106 aa17.45■□□□□ 0.38
NPAS3-201ENST00000346562 CNOT1A5YKK6 2376 aaKnown RBP17.45■□□□□ 0.38
NPAS3-201ENST00000346562 DIDO1Q9BTC0 2240 aaKnown RBP17.45■□□□□ 0.38
NPAS3-201ENST00000346562 DEFB114Q30KQ6 69 aa17.45■□□□□ 0.38
NPAS3-201ENST00000346562 TTTY13Q9BZ97 58 aa17.45■□□□□ 0.38
NPAS3-201ENST00000346562 POLEQ07864 2286 aa17.44■□□□□ 0.38
NPAS3-201ENST00000346562 C19orf84I3L1E1 186 aa17.44■□□□□ 0.38
NPAS3-201ENST00000346562 FOXI1Q12951 378 aa17.44■□□□□ 0.38
NPAS3-201ENST00000346562 C7orf33Q8WU49 177 aa17.44■□□□□ 0.38
NPAS3-201ENST00000346562 IGKV2D-26A0A0A0MRZ7 120 aa17.44■□□□□ 0.38
NPAS3-201ENST00000346562 DOCK8Q8NF50 2099 aa17.43■□□□□ 0.38
NPAS3-201ENST00000346562 MIFP14174 115 aa17.43■□□□□ 0.38
NPAS3-201ENST00000346562 P0DMU3 169 aa17.43■□□□□ 0.38
NPAS3-201ENST00000346562 FAM231AP0DMU4 169 aa17.43■□□□□ 0.38
NPAS3-201ENST00000346562 FAM231CP0DMU5 169 aa17.43■□□□□ 0.38
NPAS3-201ENST00000346562 MSMPQ1L6U9 139 aa17.43■□□□□ 0.38
NPAS3-201ENST00000346562 EML6Q6ZMW3 1958 aa17.43■□□□□ 0.38
NPAS3-201ENST00000346562 LYPD6Q86Y78 171 aa17.43■□□□□ 0.38
NPAS3-201ENST00000346562 GVINP1Q7Z2Y8 2422 aa17.43■□□□□ 0.38
NPAS3-201ENST00000346562 HIST2H2BDQ6DRA6 164 aa17.42■□□□□ 0.38
NPAS3-201ENST00000346562 J3KT08 172 aa17.42■□□□□ 0.38
NPAS3-201ENST00000346562 ZNF407Q9C0G0 2248 aa17.42■□□□□ 0.38
NPAS3-201ENST00000346562 ANAPC1Q9H1A4 1944 aa17.42■□□□□ 0.38
NPAS3-201ENST00000346562 DOCK7Q96N67 2140 aa17.41■□□□□ 0.38
NPAS3-201ENST00000346562 IGKV1D-37A0A075B6S9 117 aa17.41■□□□□ 0.38
NPAS3-201ENST00000346562 K7EQG2 157 aa17.41■□□□□ 0.38
NPAS3-201ENST00000346562 CDPF1Q6NVV7 123 aa17.4■□□□□ 0.38
NPAS3-201ENST00000346562 HEATR5AQ86XA9 2040 aa17.4■□□□□ 0.38
NPAS3-201ENST00000346562 WFDC2Q14508 124 aa17.4■□□□□ 0.38
NPAS3-201ENST00000346562 A0A0J9YXY3 114 aa17.39■□□□□ 0.37
NPAS3-201ENST00000346562 LINC00574Q9H8X3 128 aa17.39■□□□□ 0.37
NPAS3-201ENST00000346562 PLA2G2EQ9NZK7 142 aa17.39■□□□□ 0.37
NPAS3-201ENST00000346562 DOCK11Q5JSL3 2073 aa17.38■□□□□ 0.37
NPAS3-201ENST00000346562 LINC01548A6NM66 108 aa17.38■□□□□ 0.37
NPAS3-201ENST00000346562 SPTBN1Q01082 2364 aaKnown RBP17.38■□□□□ 0.37
NPAS3-201ENST00000346562 LINC00467Q9BRT7 94 aa17.38■□□□□ 0.37
NPAS3-201ENST00000346562 TRAV10A0A0B4J240 114 aa17.38■□□□□ 0.37
NPAS3-201ENST00000346562 ZNF80P51504 273 aaPredicted RBP17.37■□□□□ 0.37
NPAS3-201ENST00000346562 CACNA1GO43497 2377 aa17.37■□□□□ 0.37
NPAS3-201ENST00000346562 FSTL3O95633 263 aa17.37■□□□□ 0.37
NPAS3-201ENST00000346562 FAM19A5Q7Z5A7 132 aaPredicted RBP17.36■□□□□ 0.37
NPAS3-201ENST00000346562 USP17L23D6RBM5 183 aa17.36■□□□□ 0.37
NPAS3-201ENST00000346562 NEXN-AS1Q8NBZ9 246 aa17.35■□□□□ 0.37
NPAS3-201ENST00000346562 A0A096LNI7 61 aa17.34■□□□□ 0.37
NPAS3-201ENST00000346562 UBE2D1P51668 147 aa17.34■□□□□ 0.37
NPAS3-201ENST00000346562 TDRG1Q3Y452 100 aa17.34■□□□□ 0.37
NPAS3-201ENST00000346562 TAX1BP3O14907 124 aa17.34■□□□□ 0.37
NPAS3-201ENST00000346562 LINC00643Q86TS7 51 aa17.34■□□□□ 0.37
NPAS3-201ENST00000346562 TNRC6BQ9UPQ9 1833 aaKnown RBP17.33■□□□□ 0.37
NPAS3-201ENST00000346562 PKDREJQ9NTG1 2253 aa17.33■□□□□ 0.36
NPAS3-201ENST00000346562 Q6ZSV7 163 aa17.33■□□□□ 0.36
NPAS3-201ENST00000346562 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.33■□□□□ 0.36
NPAS3-201ENST00000346562 ZNF706Q9Y5V0 76 aaPredicted RBP17.33■□□□□ 0.36
NPAS3-201ENST00000346562 IBA57-AS1B1ANH7 110 aa17.32■□□□□ 0.36
NPAS3-201ENST00000346562 C20orf173Q96LM9 149 aa17.32■□□□□ 0.36
NPAS3-201ENST00000346562 SPANXB1Q9NS25 103 aaPredicted RBP17.32■□□□□ 0.36
NPAS3-201ENST00000346562 TRBV6-4A0A1B0GX49 114 aa17.32■□□□□ 0.36
NPAS3-201ENST00000346562 NCOR1O75376 2440 aa17.31■□□□□ 0.36
NPAS3-201ENST00000346562 WISP2O76076 250 aa17.31■□□□□ 0.36
NPAS3-201ENST00000346562 IGLC6P0CF74 106 aa17.31■□□□□ 0.36
NPAS3-201ENST00000346562 CFAP126Q5VTH2 177 aa17.31■□□□□ 0.36
NPAS3-201ENST00000346562 CADP27708 2225 aa17.31■□□□□ 0.36
NPAS3-201ENST00000346562 TRBV6-8A0A0A6YYG3 113 aa17.31■□□□□ 0.36
NPAS3-201ENST00000346562 TNRC6AQ8NDV7 1962 aaKnown RBP17.31■□□□□ 0.36
NPAS3-201ENST00000346562 SPTBN2O15020 2390 aa17.3■□□□□ 0.36
NPAS3-201ENST00000346562 LINC00482Q8N8I6 264 aa17.3■□□□□ 0.36
NPAS3-201ENST00000346562 A0A1B0GXF2 115 aa17.3■□□□□ 0.36
NPAS3-201ENST00000346562 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.3■□□□□ 0.36
NPAS3-201ENST00000346562 TCL1BO95988 128 aa17.3■□□□□ 0.36
NPAS3-201ENST00000346562 P0C879 139 aa17.3■□□□□ 0.36
NPAS3-201ENST00000346562 DOPEY2Q9Y3R5 2298 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms