RNA–Protein interactions for RNA: ENST00000340857.3

H1F0-201, Transcript of H1 histone family member 0, humanhuman

APPRIS P1 BASIC

Gene H1F0, Length 2,344 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H1F0-201ENST00000340857 TMEM141Q96I45 108 aa12.13□□□□□ -0.47
H1F0-201ENST00000340857 HIVEP1P15822 2718 aa12.13□□□□□ -0.47
H1F0-201ENST00000340857 SDHAF1A6NFY7 115 aa12.12□□□□□ -0.47
H1F0-201ENST00000340857 F5H697 171 aa12.12□□□□□ -0.47
H1F0-201ENST00000340857 TIMM17AQ99595 171 aa12.12□□□□□ -0.47
H1F0-201ENST00000340857 MRPL16Q9NX20 251 aaKnown RBP12.12□□□□□ -0.47
H1F0-201ENST00000340857 CUBNO60494 3623 aa12.12□□□□□ -0.47
H1F0-201ENST00000340857 ANK3Q12955 4377 aaKnown RBP12.12□□□□□ -0.47
H1F0-201ENST00000340857 TRBV27A0A0K0K1C4 114 aa12.12□□□□□ -0.47
H1F0-201ENST00000340857 J3QR89 54 aa12.12□□□□□ -0.47
H1F0-201ENST00000340857 LGALS9O00182 355 aa12.12□□□□□ -0.47
H1F0-201ENST00000340857 HERVK_113P61574 105 aa12.12□□□□□ -0.47
H1F0-201ENST00000340857 SPAG8Q99932 426 aaPredicted RBP12.12□□□□□ -0.47
H1F0-201ENST00000340857 TSSC4Q9Y5U2 329 aaPredicted RBP12.12□□□□□ -0.47
H1F0-201ENST00000340857 SONP18583 2426 aaKnown RBP12.11□□□□□ -0.47
H1F0-201ENST00000340857 A0A0J9YY99 117 aa12.11□□□□□ -0.47
H1F0-201ENST00000340857 TRBV6-5A0A0K0K1A5 114 aa12.11□□□□□ -0.47
H1F0-201ENST00000340857 GATA3P23771 443 aa12.11□□□□□ -0.47
H1F0-201ENST00000340857 ZNF580Q9UK33 172 aa12.11□□□□□ -0.47
H1F0-201ENST00000340857 IGHV3-16A0A0C4DH30 117 aa12.1□□□□□ -0.47
H1F0-201ENST00000340857 GAGE12HA6NDE8 117 aa12.1□□□□□ -0.47
H1F0-201ENST00000340857 TMEM95Q3KNT9 176 aa12.1□□□□□ -0.47
H1F0-201ENST00000340857 C9orf85Q96MD7 179 aa12.1□□□□□ -0.47
H1F0-201ENST00000340857 ZNRF2Q8NHG8 242 aa12.1□□□□□ -0.47
H1F0-201ENST00000340857 SIGMAR1Q99720 223 aa12.1□□□□□ -0.47
H1F0-201ENST00000340857 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
H1F0-201ENST00000340857 TSPAN13O95857 204 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 AZU1P20160 251 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 TSPEAR-AS2P59090 65 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 ZNF876PQ49A33 203 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 ODF3Q96PU9 254 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 MDFICQ9P1T7 246 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 MXRA5Q9NR99 2828 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 ZNF688P0C7X2 276 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 PSMB8P28062 276 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 FAM74A4Q5TZK3 123 aa12.09□□□□□ -0.47
H1F0-201ENST00000340857 INSL3P51460 131 aa12.08□□□□□ -0.48
H1F0-201ENST00000340857 TMEM170BQ5T4T1 132 aa12.08□□□□□ -0.48
H1F0-201ENST00000340857 SPATA25Q9BR10 227 aa12.08□□□□□ -0.48
H1F0-201ENST00000340857 TRAV12-2A0A075B6T6 113 aa12.08□□□□□ -0.48
H1F0-201ENST00000340857 A0A0J9YX75 114 aa12.08□□□□□ -0.48
H1F0-201ENST00000340857 M0QY20 66 aa12.08□□□□□ -0.48
H1F0-201ENST00000340857 DLX4Q92988 240 aaPredicted RBP12.08□□□□□ -0.48
H1F0-201ENST00000340857 IGHV4-59P01825 116 aa12.07□□□□□ -0.48
H1F0-201ENST00000340857 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
H1F0-201ENST00000340857 ZNF256Q9Y2P7 627 aaPredicted RBP12.07□□□□□ -0.48
H1F0-201ENST00000340857 APOMO95445 188 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 IGKV3-20P01619 116 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 UBE2D3P61077 147 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 SNRPD3P62318 126 aaKnown RBP12.06□□□□□ -0.48
H1F0-201ENST00000340857 UBE2D2P62837 147 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 NDUFA11Q86Y39 141 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 Q8N1Y9 231 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 AMELXQ99217 191 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 IGHV3-30P01768 117 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 IGHV3-30-5P0DP03 117 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 SMCPP49901 116 aaPredicted RBP12.06□□□□□ -0.48
H1F0-201ENST00000340857 ZNF56Q15929 161 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 DEFB112Q30KQ8 113 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 SLC25A29Q8N8R3 303 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 SYT8Q8NBV8 401 aa12.06□□□□□ -0.48
H1F0-201ENST00000340857 LOC107984156A0A0G2JMH3 177 aa12.05□□□□□ -0.48
H1F0-201ENST00000340857 J3QLI3 93 aa12.05□□□□□ -0.48
H1F0-201ENST00000340857 SFTA2Q6UW10 78 aa12.05□□□□□ -0.48
H1F0-201ENST00000340857 C10orf99Q6UWK7 81 aa12.05□□□□□ -0.48
H1F0-201ENST00000340857 ARL17AQ8IVW1 177 aa12.05□□□□□ -0.48
H1F0-201ENST00000340857 TMEM89A2RUT3 159 aa12.05□□□□□ -0.48
H1F0-201ENST00000340857 SCGB1A1P11684 91 aa12.05□□□□□ -0.48
H1F0-201ENST00000340857 SMAGPQ0VAQ4 97 aa12.05□□□□□ -0.48
H1F0-201ENST00000340857 NSUN5P1Q3KNT7 163 aa12.05□□□□□ -0.48
H1F0-201ENST00000340857 J3QQQ9 107 aa12.04□□□□□ -0.48
H1F0-201ENST00000340857 K7EQG2 157 aa12.04□□□□□ -0.48
H1F0-201ENST00000340857 PSMB2P49721 201 aa12.04□□□□□ -0.48
H1F0-201ENST00000340857 RHOHQ15669 191 aa12.04□□□□□ -0.48
H1F0-201ENST00000340857 NFE4Q86UQ8 179 aa12.04□□□□□ -0.48
H1F0-201ENST00000340857 OPRPNQ99935 248 aaPredicted RBP12.04□□□□□ -0.48
H1F0-201ENST00000340857 IGHV1OR15-1A0A075B7D0 117 aa12.04□□□□□ -0.48
H1F0-201ENST00000340857 LY6G6DO95868 133 aa12.04□□□□□ -0.48
H1F0-201ENST00000340857 CFC1BP0CG36 223 aa12.04□□□□□ -0.48
H1F0-201ENST00000340857 CFC1P0CG37 223 aa12.04□□□□□ -0.48
H1F0-201ENST00000340857 P0DMU3 169 aa12.03□□□□□ -0.48
H1F0-201ENST00000340857 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
H1F0-201ENST00000340857 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
H1F0-201ENST00000340857 TRPT1Q86TN4 253 aaKnown RBP12.03□□□□□ -0.48
H1F0-201ENST00000340857 C1QTNF4Q9BXJ3 329 aa12.03□□□□□ -0.48
H1F0-201ENST00000340857 YAE1D1Q9NRH1 226 aa12.03□□□□□ -0.48
H1F0-201ENST00000340857 FSHBP01225 129 aa12.03□□□□□ -0.48
H1F0-201ENST00000340857 SPINK13Q1W4C9 94 aa12.03□□□□□ -0.48
H1F0-201ENST00000340857 ATP6V0E2Q8NHE4 81 aa12.03□□□□□ -0.48
H1F0-201ENST00000340857 MAST4O15021 2626 aa12.02□□□□□ -0.49
H1F0-201ENST00000340857 FOXI1Q12951 378 aa12.02□□□□□ -0.49
H1F0-201ENST00000340857 F8P00451 2351 aa12.02□□□□□ -0.49
H1F0-201ENST00000340857 MTORP42345 2549 aa12.02□□□□□ -0.49
H1F0-201ENST00000340857 LGALS3P17931 250 aaKnown RBP12.02□□□□□ -0.49
H1F0-201ENST00000340857 TMEM223A0PJW6 202 aa12.01□□□□□ -0.49
H1F0-201ENST00000340857 LYRM7Q5U5X0 104 aa12.01□□□□□ -0.49
H1F0-201ENST00000340857 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
H1F0-201ENST00000340857 HIVEP2P31629 2446 aa12□□□□□ -0.49
H1F0-201ENST00000340857 SYNJ2BPP57105 145 aa12□□□□□ -0.49
H1F0-201ENST00000340857 C10orf126Q8N4M7 172 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms