RNA–Protein interactions for RNA: ENST00000338663.11

SLC3A2-201, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-201ENST00000338663 FAM19A4Q96LR4 140 aa12.88□□□□□ -0.35
SLC3A2-201ENST00000338663 NSD1Q96L73 2696 aaPredicted RBP12.88□□□□□ -0.35
SLC3A2-201ENST00000338663 A0A1W2PRX2 142 aa12.88□□□□□ -0.35
SLC3A2-201ENST00000338663 SUMO2P61956 95 aaKnown RBP12.88□□□□□ -0.35
SLC3A2-201ENST00000338663 SMAGPQ0VAQ4 97 aa12.88□□□□□ -0.35
SLC3A2-201ENST00000338663 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
SLC3A2-201ENST00000338663 PRR9Q5T870 116 aa12.88□□□□□ -0.35
SLC3A2-201ENST00000338663 ZFAND2AQ8N6M9 145 aa12.88□□□□□ -0.35
SLC3A2-201ENST00000338663 PAPPA-AS1Q5QFB9 102 aa12.87□□□□□ -0.35
SLC3A2-201ENST00000338663 VCX2Q9H322 139 aa12.87□□□□□ -0.35
SLC3A2-201ENST00000338663 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
SLC3A2-201ENST00000338663 PROK1P58294 105 aa12.86□□□□□ -0.35
SLC3A2-201ENST00000338663 CCL24O00175 119 aa12.86□□□□□ -0.35
SLC3A2-201ENST00000338663 APRG1Q8IVJ8 170 aa12.86□□□□□ -0.35
SLC3A2-201ENST00000338663 MTURNQ8N3F0 131 aa12.86□□□□□ -0.35
SLC3A2-201ENST00000338663 C1QTNF4Q9BXJ3 329 aa12.86□□□□□ -0.35
SLC3A2-201ENST00000338663 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
SLC3A2-201ENST00000338663 RPL32P62910 135 aaKnown RBP12.85□□□□□ -0.35
SLC3A2-201ENST00000338663 MORN3Q6PF18 240 aaPredicted RBP12.85□□□□□ -0.35
SLC3A2-201ENST00000338663 HIVEP1P15822 2718 aa12.85□□□□□ -0.35
SLC3A2-201ENST00000338663 DYNLRB2Q8TF09 96 aa12.84□□□□□ -0.35
SLC3A2-201ENST00000338663 TRAV2A0A0B4J234 112 aa12.84□□□□□ -0.35
SLC3A2-201ENST00000338663 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
SLC3A2-201ENST00000338663 H3BVH4 76 aa12.84□□□□□ -0.35
SLC3A2-201ENST00000338663 APOMO95445 188 aa12.84□□□□□ -0.35
SLC3A2-201ENST00000338663 UBE2D1P51668 147 aa12.84□□□□□ -0.35
SLC3A2-201ENST00000338663 SH2D6Q7Z4S9 175 aa12.84□□□□□ -0.35
SLC3A2-201ENST00000338663 A0A0J9YX75 114 aa12.83□□□□□ -0.36
SLC3A2-201ENST00000338663 J3KRW8 73 aa12.83□□□□□ -0.36
SLC3A2-201ENST00000338663 CFAP126Q5VTH2 177 aa12.83□□□□□ -0.36
SLC3A2-201ENST00000338663 TMEM61Q8N0U2 210 aa12.83□□□□□ -0.36
SLC3A2-201ENST00000338663 BAALCQ8WXS3 180 aa12.83□□□□□ -0.36
SLC3A2-201ENST00000338663 SETXQ7Z333 2677 aaKnown RBP12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 HERVK_113P61574 105 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 FOXI1Q12951 378 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 Q6ZQT7 251 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 POM121L12Q8N7R1 296 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 RASL10AQ92737 203 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 ODF3Q96PU9 254 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 PRADC1Q9BSG0 188 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 MRPL16Q9NX20 251 aaKnown RBP12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 AGRNO00468 2067 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 ASIPP42127 132 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 C2orf66Q6UXQ4 117 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 CYSLTR1Q9Y271 337 aa12.82□□□□□ -0.36
SLC3A2-201ENST00000338663 ZNF815PA8K554 130 aa12.81□□□□□ -0.36
SLC3A2-201ENST00000338663 KLLNB2CW77 178 aa12.81□□□□□ -0.36
SLC3A2-201ENST00000338663 CRLF1O75462 422 aa12.81□□□□□ -0.36
SLC3A2-201ENST00000338663 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
SLC3A2-201ENST00000338663 FN1P02751 2386 aaKnown RBP12.8□□□□□ -0.36
SLC3A2-201ENST00000338663 TRBV20-1A0A075B6N2 111 aa12.8□□□□□ -0.36
SLC3A2-201ENST00000338663 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
SLC3A2-201ENST00000338663 RNASE4P34096 147 aaKnown RBP12.8□□□□□ -0.36
SLC3A2-201ENST00000338663 UBE2D3P61077 147 aa12.8□□□□□ -0.36
SLC3A2-201ENST00000338663 UBE2D2P62837 147 aa12.8□□□□□ -0.36
SLC3A2-201ENST00000338663 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
SLC3A2-201ENST00000338663 DUSP14O95147 198 aaKnown RBP12.79□□□□□ -0.36
SLC3A2-201ENST00000338663 SCGB1D4Q6XE38 83 aa12.79□□□□□ -0.36
SLC3A2-201ENST00000338663 SETD2Q9BYW2 2564 aaPredicted RBP12.79□□□□□ -0.36
SLC3A2-201ENST00000338663 S100A4P26447 101 aaKnown RBP12.78□□□□□ -0.36
SLC3A2-201ENST00000338663 PHLDA3Q9Y5J5 127 aa12.78□□□□□ -0.36
SLC3A2-201ENST00000338663 NXPH4O95158 308 aa12.78□□□□□ -0.36
SLC3A2-201ENST00000338663 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
SLC3A2-201ENST00000338663 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.37
SLC3A2-201ENST00000338663 CKS1BP61024 79 aa12.77□□□□□ -0.37
SLC3A2-201ENST00000338663 TMEM141Q96I45 108 aa12.77□□□□□ -0.37
SLC3A2-201ENST00000338663 TSPAN13O95857 204 aa12.76□□□□□ -0.37
SLC3A2-201ENST00000338663 CD7P09564 240 aa12.76□□□□□ -0.37
SLC3A2-201ENST00000338663 DEFB131AP59861 70 aa12.76□□□□□ -0.37
SLC3A2-201ENST00000338663 PPDPFLQ8WWR9 84 aa12.76□□□□□ -0.37
SLC3A2-201ENST00000338663 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
SLC3A2-201ENST00000338663 KRTAP10-3P60369 221 aa12.76□□□□□ -0.37
SLC3A2-201ENST00000338663 NSUN5P1Q3KNT7 163 aa12.76□□□□□ -0.37
SLC3A2-201ENST00000338663 ANXA2RQ3ZCQ2 193 aa12.76□□□□□ -0.37
SLC3A2-201ENST00000338663 SBSPONQ8IVN8 264 aa12.76□□□□□ -0.37
SLC3A2-201ENST00000338663 M0QXV9 152 aa12.75□□□□□ -0.37
SLC3A2-201ENST00000338663 NDUFA11Q86Y39 141 aa12.75□□□□□ -0.37
SLC3A2-201ENST00000338663 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
SLC3A2-201ENST00000338663 ZNF256Q9Y2P7 627 aaPredicted RBP12.75□□□□□ -0.37
SLC3A2-201ENST00000338663 WNK1Q9H4A3 2382 aa12.75□□□□□ -0.37
SLC3A2-201ENST00000338663 SMCPP49901 116 aaPredicted RBP12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 CRYBA4P53673 196 aa12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 PMVKQ15126 192 aa12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 TEN1Q86WV5 123 aa12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 RPL39LQ96EH5 51 aaKnown RBP12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 TIMM17AQ99595 171 aa12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 A8MTW9 85 aa12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 INSL3P51460 131 aa12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 C14orf178Q8N769 122 aaPredicted RBP12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 SYT8Q8NBV8 401 aa12.74□□□□□ -0.37
SLC3A2-201ENST00000338663 A0A0J9YY99 117 aa12.73□□□□□ -0.37
SLC3A2-201ENST00000338663 C11orf86A6NJI1 115 aa12.73□□□□□ -0.37
SLC3A2-201ENST00000338663 KNCNA6PVL3 124 aa12.73□□□□□ -0.37
SLC3A2-201ENST00000338663 SPINK13Q1W4C9 94 aa12.73□□□□□ -0.37
SLC3A2-201ENST00000338663 CDIP1Q9H305 208 aa12.73□□□□□ -0.37
SLC3A2-201ENST00000338663 TRAV12-3A0A0B4J271 114 aa12.72□□□□□ -0.37
SLC3A2-201ENST00000338663 MGPP08493 103 aa12.72□□□□□ -0.37
SLC3A2-201ENST00000338663 PSMB2P49721 201 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms