RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 SEC11AP67812 179 aa6.93□□□□□ -1.3
C11orf54-201ENST00000331239 TMEM97Q5BJF2 176 aa6.93□□□□□ -1.3
C11orf54-201ENST00000331239 Q8N8P6 123 aa6.93□□□□□ -1.3
C11orf54-201ENST00000331239 PTH2Q96A98 100 aa6.93□□□□□ -1.3
C11orf54-201ENST00000331239 IGHV4-4A0A075B6R2 117 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 H3BVH4 76 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 IGHV4-30-4P0DP06 118 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 PIK3CD-AS1Q5SR53 167 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 PRR9Q5T870 116 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 ERASQ7Z444 233 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 OR4C5Q8NGB2 326 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 DKK2Q9UBU2 259 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 NOTCH3Q9UM47 2321 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 RNASE4P34096 147 aaKnown RBP6.92□□□□□ -1.3
C11orf54-201ENST00000331239 CSNK1G2-AS1Q8NCQ2 148 aa6.92□□□□□ -1.3
C11orf54-201ENST00000331239 IGLV2-18A0A075B6J9 118 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 TRGV11A0A075B6L2 103 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 NMUP48645 174 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 TCTAP57738 103 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 HERV-K104P63124 156 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 Q6ZQT7 251 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 NRACQ8N912 160 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 CMYA5Q8N3K9 4069 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 IGHV1OR15-1A0A075B7D0 117 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 GIG44P09565 113 aaPredicted RBP6.91□□□□□ -1.3
C11orf54-201ENST00000331239 DEFB1P60022 68 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 HSD52Q0P140 79 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 SPINK13Q1W4C9 94 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 FAM159AQ6UWV7 190 aa6.91□□□□□ -1.3
C11orf54-201ENST00000331239 AGRNO00468 2067 aa6.9□□□□□ -1.3
C11orf54-201ENST00000331239 TRAV26-2A0A0B4J265 109 aa6.9□□□□□ -1.3
C11orf54-201ENST00000331239 SIVA1O15304 175 aa6.9□□□□□ -1.3
C11orf54-201ENST00000331239 ATP5LO75964 103 aa6.9□□□□□ -1.3
C11orf54-201ENST00000331239 TRAV26-1A0A087WT03 109 aa6.9□□□□□ -1.31
C11orf54-201ENST00000331239 PRSS1P07477 247 aa6.9□□□□□ -1.31
C11orf54-201ENST00000331239 SCGB1A1P11684 91 aa6.9□□□□□ -1.31
C11orf54-201ENST00000331239 PCP2Q8IVA1 136 aa6.9□□□□□ -1.31
C11orf54-201ENST00000331239 MRAP2Q96G30 205 aa6.9□□□□□ -1.31
C11orf54-201ENST00000331239 VCX2Q9H322 139 aa6.9□□□□□ -1.31
C11orf54-201ENST00000331239 ZMAT4Q9H898 229 aa6.9□□□□□ -1.31
C11orf54-201ENST00000331239 DNAH3Q8TD57 4116 aa6.9□□□□□ -1.31
C11orf54-201ENST00000331239 A6NDN8 102 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 LAGE3Q14657 143 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 RNF183Q96D59 192 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 MGAM2Q2M2H8 2515 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 TRAV12-3A0A0B4J271 114 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 DPM2O94777 84 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 IGKCP01834 107 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 SMIM17P0DL12 118 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
C11orf54-201ENST00000331239 OCIAD2Q56VL3 154 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 WFDC10AQ9H1F0 79 aa6.89□□□□□ -1.31
C11orf54-201ENST00000331239 K7EIL1 84 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 IGKV3-20P01619 116 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 S100A4P26447 101 aaKnown RBP6.88□□□□□ -1.31
C11orf54-201ENST00000331239 ASIPP42127 132 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 AMMECR1LQ6DCA0 310 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 C1orf158Q8N1D5 194 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 LINC01587Q99440 93 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 SMIM2Q9BVW6 85 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 XCL2Q9UBD3 114 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 TRAV8-6A0A0B4J262 113 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 TEX48A0A1B0GUV7 120 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 M0R381 172 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 MIFP14174 115 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 C16orf74Q96GX8 76 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 HHLA3Q9XRX5 114 aa6.88□□□□□ -1.31
C11orf54-201ENST00000331239 TMEM263Q8WUH6 116 aaKnown RBP6.87□□□□□ -1.31
C11orf54-201ENST00000331239 PHLDA3Q9Y5J5 127 aa6.87□□□□□ -1.31
C11orf54-201ENST00000331239 IGKV2D-26A0A0A0MRZ7 120 aa6.87□□□□□ -1.31
C11orf54-201ENST00000331239 H3BRM9 83 aa6.87□□□□□ -1.31
C11orf54-201ENST00000331239 SPRY2O43597 315 aa6.87□□□□□ -1.31
C11orf54-201ENST00000331239 NHLRC4P0CG21 123 aaPredicted RBP6.87□□□□□ -1.31
C11orf54-201ENST00000331239 ZNF415Q09FC8 603 aa6.87□□□□□ -1.31
C11orf54-201ENST00000331239 DPH3P1Q9H4G8 78 aa6.87□□□□□ -1.31
C11orf54-201ENST00000331239 TRAV12-2A0A075B6T6 113 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 DAZ2Q13117 558 aaKnown RBP6.86□□□□□ -1.31
C11orf54-201ENST00000331239 KIR3DS1Q14943 382 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 ZC2HC1BQ5TFG8 222 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 C9orf85Q96MD7 179 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 AP1S3Q96PC3 154 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 MRPL35Q9NZE8 188 aaKnown RBP6.86□□□□□ -1.31
C11orf54-201ENST00000331239 HIGD1BQ9P298 99 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 IGHV3-16A0A0C4DH30 117 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 SUMO2P61956 95 aaKnown RBP6.86□□□□□ -1.31
C11orf54-201ENST00000331239 RRN3P1Q2M238 152 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 ORMDL2Q53FV1 153 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 OVOL2Q9BRP0 275 aa6.86□□□□□ -1.31
C11orf54-201ENST00000331239 C9orf118A6NHY6 69 aa6.85□□□□□ -1.31
C11orf54-201ENST00000331239 NXPH4O95158 308 aa6.85□□□□□ -1.31
C11orf54-201ENST00000331239 B9D2Q9BPU9 175 aa6.85□□□□□ -1.31
C11orf54-201ENST00000331239 C20orf78Q9BR46 151 aa6.85□□□□□ -1.31
C11orf54-201ENST00000331239 TM2D3Q9BRN9 247 aa6.85□□□□□ -1.31
C11orf54-201ENST00000331239 A0A087WX48 190 aa6.85□□□□□ -1.31
C11orf54-201ENST00000331239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-201ENST00000331239 RBMY1A1P0DJD3 496 aaKnown RBP6.85□□□□□ -1.31
C11orf54-201ENST00000331239 RBMY1CP0DJD4 496 aa6.85□□□□□ -1.31
C11orf54-201ENST00000331239 PLNP26678 52 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms